G236232


Basic Information

Item Value
gene id G236232
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20233669 ~ 20261068 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320504
aaaaacatgtcTTTtttttttttttaaaggcccaAATTATTGTCCCGAAAAGAAGCTTTCTGCACGATAAAGTGAATACTGTGAATAGTGACGTAGCTCTACAGAGCGACAATTTAAATGTTCCCAGCACCTTTCACCCCCTTTCTTACATGACAACAATGACAATGACGATGATGAGAAGTGAACGCTGTTGCAGTAATAACAGAGATTAAATAGTCGGAGGCGTGGAAGCAAACTCAGGCTATATCTACACGGCTACGTTTTCTTTGAGACAAAAACTAACGGATGAGACCAAATCAGGAGGCAGAGGTTTCCAAATGTCTGTCGGAAACGCAGCAGTAGTGCGGATGCAAGGCGTAAAAGTAGCAAAATATATGCAGTTTCAAACCAAAACCGCAGTGTTTCCACGGGCTCTTTTTTTAGGAGCTGATATTTCTCAATTTTAATGCCTTCTCTAAGAAATAAACGGATCAAAGTATGCCGAAGTTTGTCCGCAAGTCGACAGGCAAACGACTTTTTCTGAATGGAGTTTGGAAAATTGTAGAGTGGATGCGAGATGTAAaagtagcaaaagatatttgtttctaaaccaaaatgtagtagtgtagatgtagcctcaaCTGAACTGTAACTGTGAGACATCAAACTGTGCTGTAAGTGCTCAGCTTTTTGTAAattacatacagtttattaaTGACTActggccagctgacagtcacAGCACCAGTCTGAACATTGTTTAAAAAgagataaaatataaaacatgataatataaaaaaaagacctgattcttctctctttttttcttttaaacgtAGAAAGTAACAGTCTTTTGGTTTGCATACGTGCAGcctcagagagaaagaaaacagcaaAGACTTTTAAGTTggataaattaaaatataaaaagcaaaTTATCTCTGCGGTTTGATCCACAGCACCGATCACCTGGAGTTGATCTGATGCATCTGTCCTGGGTTTTCTCTCCGTGATAGCGAGCTGTGTCTGTAATAAATAAAGCGGGCTCGGGGATCAGAAGTTCTTGAAGATCTCCAAGTCCTTGGGAGGCACAGGAGGATCTTTCTTCCAGTCGTCCTCCGGGTAAACGTCAAAGTTGGAGGTGTCTCCGTCATGGGACACTTTGGGAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320504 True 1150 lncRNA 0.40 2 20233669 20261068

Neighbor

gene id symbol gene type direction distance location
pnpla4 pnpla4 coding downstream 477700 19749071 ~ 19755969 (-)
aox6 NA coding downstream 579357 19622102 ~ 19654312 (-)
bzw1a LOC107384676,LOC108245120,LOC107082828,LOC103371116,LOC101480137,LOC103457358 coding downstream 612018 19608622 ~ 19621651 (-)
kynu kynu,LOC102785701 coding downstream 652411 19551436 ~ 19581258 (-)
acvr2ab acvr2a,LOC102784913,LOC103371821 coding downstream 1710653 18465948 ~ 18523016 (-)
dhrsx dhrsx,LOC104961879,LOC108244136,LOC106908010,LOC106908011 coding upstream 114525 20375593 ~ 20380492 (-)
LOC120554635 LOC104961873,LOC103363323 coding upstream 181913 20442981 ~ 20456063 (-)
LOC120554361 NA coding upstream 533278 20794346 ~ 20802270 (-)
vps16 vps16 coding upstream 592497 20853565 ~ 20867800 (-)
dytn NA coding upstream 704870 20965938 ~ 21075255 (-)
G236198 NA non-coding downstream 27120 20206307 ~ 20206549 (-)
G236197 NA non-coding downstream 46803 20186389 ~ 20186866 (-)
G236193 NA non-coding downstream 90674 20142771 ~ 20142995 (-)
G236190 NA non-coding downstream 138939 20094225 ~ 20094730 (-)
G236177 NA non-coding downstream 183780 20049500 ~ 20049889 (-)
G236245 NA non-coding upstream 4975 20266043 ~ 20266481 (-)
G236246 NA non-coding upstream 5418 20266486 ~ 20266731 (-)
G236247 NA non-coding upstream 6799 20267867 ~ 20268667 (-)
G236248 LOC104951987,LOC103359801 non-coding upstream 9416 20270484 ~ 20271413 (-)
G236249 LOC103376870 non-coding upstream 10407 20271475 ~ 20272734 (-)
G236111 sts,LOC108241831 other downstream 501132 19731319 ~ 19732537 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other downstream 704427 19523504 ~ 19529242 (-)
LOC120554371 mbd5,LOC102784158 other downstream 1794251 18404226 ~ 18439418 (-)
LOC120554370 LOC103370263 other downstream 1906566 18271078 ~ 18327103 (-)
s100b LOC103360204,LOC104927403 other downstream 2488412 17734731 ~ 17745257 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 106273 20367341 ~ 20368433 (-)
G236340 NA other upstream 465335 20726403 ~ 20728427 (-)
G236349 NA other upstream 499640 20760708 ~ 20760992 (-)
rgn LOC103371141 other upstream 582424 20843492 ~ 20853383 (-)
G236646 NA other upstream 601612 20862680 ~ 20863311 (-)

Expression


Co-expression Network