G236247


Basic Information

Item Value
gene id G236247
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20267867 ~ 20268667 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320519
CACATCTGTTCTCTGGGGGGACGAAGAGGTAATATGGGCCTTGGCAGAGAACGGATTCCTCCTTATGCTCAGGATCACCGTTCTTGTGCTGGAAGCCACCACGTTACTCACTGAGCACTCGTATCTCCCCGCATTTTCCTTGCCCAAACCCTGTATGTACAGTGTCCCGTTGGGGAAGACACCGAGCTTGCGTCCGTTGACAAACTGGGAAGCGATGAGCTGAACGCCGTCAGGTGTGATCCAGCGTATATGTGGCTGTGTTCCACCTACAGCCGAGCAATGGATGTAGGCGTTGGCGCCCTCTAGGAGCGTTGTGTTCTCGTGTCGCATCTGCTGAATCATGGGCAGCAACGCAGACACGTAAAGTCGCACCGAGACCGTGTCGGCTCCCGCTGCGCTGCTCCCAATGCACTTATAAATCCCTTGGTTTGCGTAAGCAGCCTGGTTTATCCGGAGAGTCCCGTTACTGAAGATGGCAATATTTTGCTGAGTGGCAATGCCAGCTGCAGCCACGTGGACGTGGTTTGGGAGCGTCCACGTGACTTGAGGCGTAGGGTGACCCTCCGTGTTACACTCCAAATCGACTTTGCCACCGAGGTGCACAGTTATGTCCCTGTGCCGAGGCTGGAGGATCCGCGGATGCTGAGCGAAAACCACAAGGTTGACCACCATCTTGTCTGTGCCATACTGGTTCTGGACCGTGCAAAGGTACTGCCCTCCATCTGTGGGCTGTGTGTTCCTAATGATTAACGTACCGTTTGGATGGACTTCGAACCTCTGGATCCTGGTGTTCTGAGCGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320519 True 801 lncRNA 0.55 1 20267867 20268667

Neighbor

gene id symbol gene type direction distance location
pnpla4 pnpla4 coding downstream 511898 19749071 ~ 19755969 (-)
aox6 NA coding downstream 613555 19622102 ~ 19654312 (-)
bzw1a LOC107384676,LOC108245120,LOC107082828,LOC103371116,LOC101480137,LOC103457358 coding downstream 646216 19608622 ~ 19621651 (-)
kynu kynu,LOC102785701 coding downstream 686609 19551436 ~ 19581258 (-)
acvr2ab acvr2a,LOC102784913,LOC103371821 coding downstream 1744851 18465948 ~ 18523016 (-)
dhrsx dhrsx,LOC104961879,LOC108244136,LOC106908010,LOC106908011 coding upstream 106926 20375593 ~ 20380492 (-)
LOC120554635 LOC104961873,LOC103363323 coding upstream 174314 20442981 ~ 20456063 (-)
LOC120554361 NA coding upstream 525679 20794346 ~ 20802270 (-)
vps16 vps16 coding upstream 584898 20853565 ~ 20867800 (-)
dytn NA coding upstream 697271 20965938 ~ 21075255 (-)
G236246 NA non-coding downstream 1136 20266486 ~ 20266731 (-)
G236245 NA non-coding downstream 1386 20266043 ~ 20266481 (-)
G236232 NA non-coding downstream 6799 20233669 ~ 20261068 (-)
G236198 NA non-coding downstream 61318 20206307 ~ 20206549 (-)
G236197 NA non-coding downstream 81001 20186389 ~ 20186866 (-)
G236248 LOC104951987,LOC103359801 non-coding upstream 1817 20270484 ~ 20271413 (-)
G236249 LOC103376870 non-coding upstream 2808 20271475 ~ 20272734 (-)
G236261 NA non-coding upstream 36826 20305493 ~ 20312827 (-)
G236279 NA non-coding upstream 104333 20373000 ~ 20373241 (-)
G236282 NA non-coding upstream 114484 20383151 ~ 20394034 (-)
G236111 sts,LOC108241831 other downstream 535330 19731319 ~ 19732537 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other downstream 738625 19523504 ~ 19529242 (-)
LOC120554371 mbd5,LOC102784158 other downstream 1828449 18404226 ~ 18439418 (-)
LOC120554370 LOC103370263 other downstream 1940764 18271078 ~ 18327103 (-)
s100b LOC103360204,LOC104927403 other downstream 2522610 17734731 ~ 17745257 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 98674 20367341 ~ 20368433 (-)
G236340 NA other upstream 457736 20726403 ~ 20728427 (-)
G236349 NA other upstream 492041 20760708 ~ 20760992 (-)
rgn LOC103371141 other upstream 574825 20843492 ~ 20853383 (-)
G236646 NA other upstream 594013 20862680 ~ 20863311 (-)

Expression


Co-expression Network