G236310


Basic Information

Item Value
gene id G236310
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20540455 ~ 20540699 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320602
aggctcctctccttaacctgcctctcttagttatgctgttataattctagactgccggggaaattccttccttcctatgacacactgagctgctctctcctctctcttttcattgTTTCCTTTagtgtgcatccttgtcccagaaatgcttgttactaacctagctctggggagtttactccctggagtccatttgtttctttttcaccCAGAATATTTCCATGGCACCAAAATCTGGGTCCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320602 True 245 lncRNA 0.45 1 20540455 20540699

Neighbor

gene id symbol gene type direction distance location
LOC120554635 LOC104961873,LOC103363323 coding downstream 84392 20442981 ~ 20456063 (-)
dhrsx dhrsx,LOC104961879,LOC108244136,LOC106908010,LOC106908011 coding downstream 159963 20375593 ~ 20380492 (-)
pnpla4 pnpla4 coding downstream 784486 19749071 ~ 19755969 (-)
aox6 NA coding downstream 886143 19622102 ~ 19654312 (-)
bzw1a LOC107384676,LOC108245120,LOC107082828,LOC103371116,LOC101480137,LOC103457358 coding downstream 918804 19608622 ~ 19621651 (-)
LOC120554361 NA coding upstream 253647 20794346 ~ 20802270 (-)
vps16 vps16 coding upstream 312866 20853565 ~ 20867800 (-)
dytn NA coding upstream 425239 20965938 ~ 21075255 (-)
ftcd ftcd coding upstream 450191 20990890 ~ 21003269 (-)
LOC120554641 LOC103473932 coding upstream 586195 21126894 ~ 21149363 (-)
G236309 NA non-coding downstream 2341 20537901 ~ 20538114 (-)
G236303 NA non-coding downstream 29379 20509227 ~ 20511076 (-)
G236294 rcan1,LOC106534915,LOC103389732 non-coding downstream 60136 20479155 ~ 20480319 (-)
G236293 NA non-coding downstream 61417 20477186 ~ 20479038 (-)
G236282 NA non-coding downstream 146421 20383151 ~ 20394034 (-)
G236311 NA non-coding upstream 15016 20555715 ~ 20555983 (-)
G236326 runx1,LOC104961881 non-coding upstream 93179 20633878 ~ 20635879 (-)
G236335 NA non-coding upstream 136355 20677054 ~ 20677301 (-)
G236347 NA non-coding upstream 211910 20752609 ~ 20753023 (-)
LOC120554725 NA non-coding upstream 212651 20753350 ~ 20754536 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other downstream 172022 20367341 ~ 20368433 (-)
G236111 sts,LOC108241831 other downstream 807918 19731319 ~ 19732537 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other downstream 1011213 19523504 ~ 19529242 (-)
LOC120554371 mbd5,LOC102784158 other downstream 2101037 18404226 ~ 18439418 (-)
LOC120554370 LOC103370263 other downstream 2213352 18271078 ~ 18327103 (-)
G236340 NA other upstream 185704 20726403 ~ 20728427 (-)
G236349 NA other upstream 220009 20760708 ~ 20760992 (-)
rgn LOC103371141 other upstream 302793 20843492 ~ 20853383 (-)
G236646 NA other upstream 321981 20862680 ~ 20863311 (-)
LOC120554644 NA other upstream 352215 20892914 ~ 20920498 (-)

Expression


Co-expression Network