cavin2b


Basic Information

Item Value
gene id cavin2b
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20845648 ~ 20887369 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320681
agacagacaggttagacagacagacagacaggtacagacagacagacagacaggtagagacagacaaacatacagacaggtagggaagaaagacagacagacaggttaaacGGAcaggttagacagacagacaaacaggtagggaagaaagacagacagacagacagatggacagaaagttagacagacaggttagacaggcagacaggtagGACAAACagggaagacagacagacatacatagagacagacagggaagaCAGACAGTTAcctcagagagaaagagacagaggattTTAATAAATGTTGAACTGTTTCTTTAAAGTGTCGAGCTGTTTGACGACTATcatatagatatatacatatataatattatatatatatacacagtatatatatatatatatatatatatatacacagtatatatatatacactatactaTCAGATTGTCTGACATCTTTACGTATCTCCAACATTGTAACTTGTTCAGGCCGTGTTTAGTGATGTTTAAAGTTGTGAATGAAGTCGGAGACGTTTAATTCTTCAACTGATCGGAAAACGTAGAAAACTAAAACATATATCCTGAGATACACGGTTTTTAAGTTTTACTTTCTTTGTTTATTCTTGTTTTCATTGAAGAACAGCTGACTGATATACACACTAAAGATCAGCTGATCGATAACAGAGATCTGGGAGAGAAACATGGTGCTAAACAGACGCCTGGAAACCTAAATAACCTTCAAACATTCCTCTTATCTTCCACCAATCATTCCCAGACATTAGACCTGCCTGGAGGTTCCTCTTAGTTTATACTACTGTTCCTACTACCCCTTAAGTCCCCCTAAAGTTCCCCCCTAAGGTCCCCTATAAGTCCCCCTATAAGTCTCCTTAAGTCCCCCTAAAGTTCCCTCCTAAGGTCCCCTATAAGTCCCCCTAAATTCCCCTTAAGTCCCCCTATAAGTCCCCCTATAAGTCCCCTATAAGTCTCCTAAAGTTCCCCCTCTAAGTCCCCCTTAAGTCCCCCTAAGGTTCTCCTGATGTCCTCTCTTTCTGTTATTGTAATATAAGAGATATTTGATGTCCAGAGCCACCAGATAATCTGCAGGTTTTGGCGGTTATCTGTTTGGTGttaagttttattttcatttgttgtTTAAAATCTGCAGTTATTGTGTTAGTCTACTTCCTGTTGATGCTTATTAACTGCTTATTAAGGGCTTATTAACGACACGTTATTAATAACAACTATTAACTTTATAATCTGCAACTACGACAGAAACTCGGATCCAACGGTTCGACGATGTTTCAGGTTTTATAAAGTCGGTTTTggtattttatttcattctgCTGCCAAAGAACTGAACTCTGTAACCAATAAAGTCTGTGTgaccac
>XM_039793203.1
acacacacacacacacacacacacacacacacacacacacacacactctcacactggGGTGGAGTCCACTGCTTTTCTGCAGCTGAGAGTTTCAGGAGTTTCTGGAGTTTTTCGGTTCGACTCGGAGCCTTTCTCTGCGTCGTCATGGTTACTACGGAGACCCACCAGAGCCAGGACCTCTTGGTCCCCCAGCAGAACCAGGACCAGCAGAACCAGGACCTCCAGGACCAGGACCTGGACCAGGTTTTCACCGTGTCAGCGCTGGATCCCGAGGCCATGACTCAGGGTCCAGTCAACGCCATCACGGTCCTCACGCTGCTGGACAAGCTGGTCCACATGCTGGACGCGGTCCAGGAGAACCAGGGCAAGATGGAGGTGCACCAGGTGCAGATGGAGGGTGTGGTGAGAGGGATTCAGGCCGATATGACCAAACTGTCTAAGAGTCACAGCATCACCTCCAACACGGTCAGCAAGCTGCTGGACAAGAGCCGCAGACTCTCCGTCACCATGAAGGAGgtgCGTGATAAGATGGAGCGTCAGGGCGTCCAGGTGAAGAAGCTGGAGGCCAACCACGCCCACCTGATCAGCAGGAACAACTTCAAGGTCCTCATCTTCCAGGAGGAAACCGAGATCCCGTCGACGGTTTTCGTGAAGGATCCGCCTCCGTTCCCTCGCGAGGAGATTCTGGAGGAAGTCGACGAGTCGATGGCGGGTGTTGCCGACGGCAACCGTTCGGAGGAGGGGGGGTTGCACAGCATCGACCTATCATCTGACGAGGATGTCGGGCTGGAGGCGGAgctagaggaagaggaggcgtGGCCTCAAGATCTGGAGAATAACCCGGAGAAATCCAGAACGGAGAAACTGAAACGCTCCAGTCTGAAGAAGGTGGACAGTCTGAAGAAGGCGTTCTCCAGGCAGAACATCGAGAAGAAGATGACGAAGATCGGAACGAAGATTGTTTCTCTGGAACAACGAGATAAAATCAAACAGAAGACCTCCAGTATGTCCTTCAGCTTCGGCAAGCATCGTAGCGGCTCCGACTCTCATCCCACCGAAGCGTCTCTCCAGGAAGAGGAAGCGGTGATCCCCGAGGAGACCGACGTCCAGCTGACCTCGCCGGGAAGCACCGACCAGGAAGTAGCCTCCACCGAACAGGAAGTAGCCTTCACCAAACAGGAAGTGTCCTTCACCGAAGTTCACGCCCAGCTGGCTCCGGCCGAGCaggcagagaaagagggagaggaaaaagaggaaaaggagaaggGAGGTGATGAAGAGGAGAAGGGAGGTGATGAAGAGGAGAAGGGAGGTGATGAAGAGAAGAAGGGGGGTGATGAAGAGGAGAAGGGAGGTGATGAAGAGGGTGATGTGTCCGTGGTGTCTGAGGGAATCGGGGCAGACTACGCCCTGTCCTCCACGCTGCCTCAGGAGGAGAACCAATCATAAACACTTCAACATTTAGAGAAATCTgattcttcttctctctccttctgagCTGCTTGTTCAAGATTGAGTCTGCTgaatcaccatggcaacaacctcCGGTAGACAACCAGCCGTTCAGAATCACCGTGACAACAACCGCCGTACTTCTGTACTCTTTGGTAACGTTTAAAGATATATAAACACGGAGGTCCccctaacagacagacagacagacagacaggtagagacagacagacagacagacagaca

Function

NR:

description
PREDICTED: serum deprivation-response protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320681 False 1397 lncRNA 0.39 2 20845648 20887369
XM_039793203.1 True 1698 mRNA 0.55 6 20876431 20886020

Neighbor

gene id symbol gene type direction distance location
LOC120554009 NA coding upstream 138113 20706392 ~ 20707535 (+)
LOC120554008 NA coding upstream 151037 20692960 ~ 20694611 (+)
LOC120554612 rcan1,LOC103389732 coding upstream 365322 20459974 ~ 20480326 (+)
gyg2 NA coding upstream 426530 20409012 ~ 20419118 (+)
LOC120554617 LOC108431163 coding upstream 520026 20323492 ~ 20325622 (+)
ebpl NA coding downstream 600 20887969 ~ 20889752 (+)
eef1b2 eef1b2,LOC102792575 coding downstream 64783 20952152 ~ 20956272 (+)
LOC120554650 NA coding downstream 125125 21012494 ~ 21026525 (+)
LOC120554642 NA coding downstream 139683 21027052 ~ 21047316 (+)
LOC120554645 NA coding downstream 162145 21049514 ~ 21063917 (+)
G236355 NA non-coding upstream 7838 20786949 ~ 20837810 (+)
G236361 NA non-coding upstream 50248 20793466 ~ 20795400 (+)
G236346 NA non-coding upstream 92631 20752616 ~ 20753017 (+)
LOC120554017 NA non-coding upstream 149116 20695924 ~ 20696532 (+)
G236334 NA non-coding upstream 168217 20677188 ~ 20677431 (+)
G236383 NA non-coding downstream 5550 20892919 ~ 20920763 (+)
G236387 NA non-coding downstream 11649 20899018 ~ 20941457 (+)
G236388 NA non-coding downstream 13617 20900986 ~ 20931759 (+)
G236405 NA non-coding downstream 75219 20962588 ~ 20965747 (+)
G236407 NA non-coding downstream 79027 20966396 ~ 20967733 (+)
fmnl2b LOC101465085,LOC102790854,LOC102292591,LOC106517599,LOC100693318 other upstream 3870 20769476 ~ 20841778 (+)
LOC120554627 runx1,LOC104961881 other upstream 209726 20595095 ~ 20635922 (+)
LOC120554724 plcd4,LOC103363317 other upstream 334572 20487667 ~ 20511076 (+)
cd99 NA other upstream 439322 20383318 ~ 20406326 (+)
LOC120554192 adarb1,dhrsx,LOC103363325,LOC104961879,LOC106908010,LOC106908011,LOC103156197,LOC103156196 other upstream 467908 20355302 ~ 20377740 (+)
G236394 NA other downstream 25286 20912655 ~ 20916777 (+)
zdbf2 NA other downstream 69580 20956949 ~ 20964585 (+)
LOC120554011 cd59,LOC102793758,LOC101486506,LOC100705993,LOC104934006,LOC103366567 other downstream 88703 20976072 ~ 21077796 (+)
G236467 NA other downstream 414957 21302326 ~ 21361235 (+)
G236461 LOC102792843 other downstream 520558 21407927 ~ 21422915 (+)

Expression


Co-expression Network