Gene
RNA
| Item | Value |
|---|---|
| gene id | G236378 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053135.1 |
| NCBI id | CM020932.1 |
| chromosome length | 21835524 |
| location | 20870666 ~ 20873613 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016755 | transferase activity, transferring amino-acyl groups | molecular_function |
| GO:0003810 | protein-glutamine gamma-glutamyltransferase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU320709 | True | 325 | lncRNA | 0.47 | 2 | 20872282 | 20873613 |
| TU320710 | False | 314 | lncRNA | 0.47 | 2 | 20870666 | 20873613 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120554009 | NA | coding | upstream | 163131 | 20706392 ~ 20707535 (+) |
| LOC120554008 | NA | coding | upstream | 176055 | 20692960 ~ 20694611 (+) |
| LOC120554612 | rcan1,LOC103389732 | coding | upstream | 390340 | 20459974 ~ 20480326 (+) |
| gyg2 | NA | coding | upstream | 451548 | 20409012 ~ 20419118 (+) |
| LOC120554617 | LOC108431163 | coding | upstream | 545044 | 20323492 ~ 20325622 (+) |
| ebpl | NA | coding | downstream | 14356 | 20887969 ~ 20889752 (+) |
| eef1b2 | eef1b2,LOC102792575 | coding | downstream | 78539 | 20952152 ~ 20956272 (+) |
| LOC120554650 | NA | coding | downstream | 138881 | 21012494 ~ 21026525 (+) |
| LOC120554642 | NA | coding | downstream | 153439 | 21027052 ~ 21047316 (+) |
| LOC120554645 | NA | coding | downstream | 175901 | 21049514 ~ 21063917 (+) |
| G236377 | NA | non-coding | upstream | 2865 | 20866678 ~ 20867801 (+) |
| G236360 | NA | non-coding | upstream | 4255 | 20865514 ~ 20866411 (+) |
| G236355 | NA | non-coding | upstream | 32856 | 20786949 ~ 20837810 (+) |
| G236361 | NA | non-coding | upstream | 75266 | 20793466 ~ 20795400 (+) |
| G236346 | NA | non-coding | upstream | 117649 | 20752616 ~ 20753017 (+) |
| G236359 | NA | non-coding | downstream | 4677 | 20878290 ~ 20878970 (+) |
| G236383 | NA | non-coding | downstream | 19306 | 20892919 ~ 20920763 (+) |
| G236387 | NA | non-coding | downstream | 25405 | 20899018 ~ 20941457 (+) |
| G236388 | NA | non-coding | downstream | 27373 | 20900986 ~ 20931759 (+) |
| G236405 | NA | non-coding | downstream | 88975 | 20962588 ~ 20965747 (+) |
| fmnl2b | LOC101465085,LOC102790854,LOC102292591,LOC106517599,LOC100693318 | other | upstream | 28888 | 20769476 ~ 20841778 (+) |
| LOC120554627 | runx1,LOC104961881 | other | upstream | 234744 | 20595095 ~ 20635922 (+) |
| LOC120554724 | plcd4,LOC103363317 | other | upstream | 359590 | 20487667 ~ 20511076 (+) |
| cd99 | NA | other | upstream | 464340 | 20383318 ~ 20406326 (+) |
| LOC120554192 | adarb1,dhrsx,LOC103363325,LOC104961879,LOC106908010,LOC106908011,LOC103156197,LOC103156196 | other | upstream | 492926 | 20355302 ~ 20377740 (+) |
| G236394 | NA | other | downstream | 39042 | 20912655 ~ 20916777 (+) |
| zdbf2 | NA | other | downstream | 83336 | 20956949 ~ 20964585 (+) |
| LOC120554011 | cd59,LOC102793758,LOC101486506,LOC100705993,LOC104934006,LOC103366567 | other | downstream | 102459 | 20976072 ~ 21077796 (+) |
| G236467 | NA | other | downstream | 428713 | 21302326 ~ 21361235 (+) |
| G236461 | LOC102792843 | other | downstream | 534314 | 21407927 ~ 21422915 (+) |
