G236446


Basic Information

Item Value
gene id G236446
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21193603 ~ 21247124 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320800
cacacacacagacacacagacacacacagacacacagacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacagacacacacagatacacacacacacacacacacacacacagatacacacacacacacacacacacacacacggatacacacacacagatacacacacacacacacacatatacacacacacacac
>TU320801
cagagacacacacacacacacagacacacacacacacacacacagaaacacacacacacacacacacagatacacagacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacagacacacacagatacacacacacacacacacacacacacagatacacacacacacacacacacacacacacggatacacacacacagatacacacacacacacacacatatacacacacacacac
>TU320802
acagagagagagacacacacacacagagacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacagacacacacagatacacacacacacacacacacacacacagatacacacacacacacacacacacacacacggatacacacacacagatacacacacacacacacacatatacacacacacacac
>TU320803
acacagacacacagatatatacacacacagatacacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacagacacacacagatacacacacacacacacacacacacacagatacacacacacacacacacacacacacacggatacacacacacagatacacacacacacacacacatatacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320800 False 287 lncRNA 0.47 3 21241157 21247124
TU320801 True 327 lncRNA 0.47 3 21228704 21247124
TU320802 False 278 lncRNA 0.47 3 21193603 21247124
TU320803 False 254 lncRNA 0.46 3 21206768 21247124

Neighbor

gene id symbol gene type direction distance location
LOC120554666 NA coding upstream 2158 21165803 ~ 21191445 (+)
LOC120554012 NA coding upstream 28049 21157961 ~ 21165554 (+)
LOC120554651 NA coding upstream 72833 21098583 ~ 21120770 (+)
LOC120554645 NA coding upstream 129686 21049514 ~ 21063917 (+)
LOC120554642 NA coding upstream 146287 21027052 ~ 21047316 (+)
LOC120554662 NA coding downstream 42239 21289363 ~ 21292223 (+)
dph3 dph3,LOC107559917,LOC105022091,LOC107660145 coding downstream 120321 21367445 ~ 21371904 (+)
cdk15 cdk15,LOC100710713 coding downstream 125491 21372615 ~ 21392410 (+)
LOC120554659 NA coding downstream 356368 21603492 ~ 21605036 (+)
LOC120554665 NA coding downstream 364795 21611919 ~ 21612646 (+)
G236413 NA non-coding upstream 205192 20980566 ~ 20988411 (+)
G236407 NA non-coding upstream 225870 20966396 ~ 20967733 (+)
G236405 NA non-coding upstream 227856 20962588 ~ 20965747 (+)
G236387 NA non-coding upstream 252146 20899018 ~ 20941457 (+)
G236455 NA non-coding downstream 49053 21296177 ~ 21330483 (+)
G236492 NA non-coding downstream 125997 21373121 ~ 21373379 (+)
G236443 NA non-coding downstream 128313 21375437 ~ 21387338 (+)
G236438 NA non-coding downstream 129353 21376477 ~ 21378434 (+)
G236439 NA non-coding downstream 141346 21388470 ~ 21390145 (+)
LOC120554011 cd59,LOC102793758,LOC101486506,LOC100705993,LOC104934006,LOC103366567 other upstream 115807 20976072 ~ 21077796 (+)
zdbf2 NA other upstream 229018 20956949 ~ 20964585 (+)
G236394 NA other upstream 276826 20912655 ~ 20916777 (+)
cavin2b NA other upstream 306234 20845648 ~ 20887369 (+)
fmnl2b LOC101465085,LOC102790854,LOC102292591,LOC106517599,LOC100693318 other upstream 351825 20769476 ~ 20841778 (+)
G236467 NA other downstream 55202 21302326 ~ 21361235 (+)
G236461 LOC102792843 other downstream 160803 21407927 ~ 21422915 (+)
G236459 LOC103360213,LOC106936810,LOC103477369,LOC103473932,LOC106933094,LOC107835021,LOC108249964,LOC107380983,LOC108250351,LOC108242155,LOC108250349,LOC108229490 other downstream 177161 21424285 ~ 21634001 (+)
G236530 NA other downstream 375374 21622498 ~ 21623439 (+)
G236466 NA other downstream 378814 21625938 ~ 21633849 (+)

Expression


Co-expression Network