G236455


Basic Information

Item Value
gene id G236455
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21296177 ~ 21330483 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320820
gtgaaaagagacagaattcaaaactaaacatgacacaAGTCAACGGCATTTCTACAATTTAatgatcacagcttccatctTTAAAGGACTGGAAGTGGAAGAAGTTTACAGTGTTCACCAGGAATCTGTTCAATCATTATGAATTTGTTCatacaaagttcattcattagtttATAACAATAACCTGAAATATTTCTGTGATCCTGTACAGAGTCAACTGATCAGCAATGAGAAACAGGAGACTCTCCATCctacagaggacacagagacactgaggcaCCAGAAGACCTGGGCAAGAACTCAGACACAGGAGACCAGAATCCAAACCCTGGATAAAGAggttgagtgaatgtggtgttgaaggtgtagagGTGGAAAaatgagtcagaggagactgtgtagaaggacagagagccagcaggacagtccacatacactgctactctaccagagacagaggaggaggagatggatgttCCTCTGTTATTGTGCCAGACAGAGTAACCATCATCAGAGCAgctcagactccaggactgatcattatatccaaacacacagtcatctctgtctcctctcctcctgattcctctgtaactcactgatatagtaacatctcctctcctcttgatctcccagtaacagcgaccagtcagaccatctctacacagcagctgaggccagtcaaacctctctggatgatcaggatatgactGATCCTCCTCCACATGtttcaccttcctgttgttgtcagacagtttgagttttctgttcactgtgtttgtgtcgagTGTcagttcacaggaatctgacggagagaaTGAGACACAACAGAActgcagttatttattttttattttattacttttggGGCATCTTTAGCCTTTACTTGATATGACaactgaagacaggaaagacgAGAGAGAACGCgaggaaatgacatgcagcagtgGTTCAGATTGGAACACCGGGCTGTAAGAACTGAGCCTTAGTACAAACCCAAATTAATTTGAAGTTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320820 True 1016 lncRNA 0.43 2 21296177 21330483

Neighbor

gene id symbol gene type direction distance location
LOC120554662 NA coding upstream 3954 21289363 ~ 21292223 (+)
LOC120554666 NA coding upstream 104732 21165803 ~ 21191445 (+)
LOC120554012 NA coding upstream 130623 21157961 ~ 21165554 (+)
LOC120554651 NA coding upstream 175407 21098583 ~ 21120770 (+)
LOC120554645 NA coding upstream 232260 21049514 ~ 21063917 (+)
dph3 dph3,LOC107559917,LOC105022091,LOC107660145 coding downstream 36962 21367445 ~ 21371904 (+)
cdk15 cdk15,LOC100710713 coding downstream 42132 21372615 ~ 21392410 (+)
LOC120554659 NA coding downstream 273009 21603492 ~ 21605036 (+)
LOC120554665 NA coding downstream 281436 21611919 ~ 21612646 (+)
G236446 NA non-coding upstream 49053 21193603 ~ 21247124 (+)
G236440 NA non-coding upstream 62204 21152413 ~ 21233973 (+)
G236448 NA non-coding upstream 72484 21197425 ~ 21223693 (+)
G236413 NA non-coding upstream 307766 20980566 ~ 20988411 (+)
G236407 NA non-coding upstream 328444 20966396 ~ 20967733 (+)
G236492 NA non-coding downstream 42638 21373121 ~ 21373379 (+)
G236443 NA non-coding downstream 44954 21375437 ~ 21387338 (+)
G236438 NA non-coding downstream 45994 21376477 ~ 21378434 (+)
G236439 NA non-coding downstream 57987 21388470 ~ 21390145 (+)
G236501 NA non-coding downstream 99697 21430180 ~ 21617586 (+)
LOC120554011 cd59,LOC102793758,LOC101486506,LOC100705993,LOC104934006,LOC103366567 other upstream 218381 20976072 ~ 21077796 (+)
zdbf2 NA other upstream 331592 20956949 ~ 20964585 (+)
G236394 NA other upstream 379400 20912655 ~ 20916777 (+)
cavin2b NA other upstream 408808 20845648 ~ 20887369 (+)
fmnl2b LOC101465085,LOC102790854,LOC102292591,LOC106517599,LOC100693318 other upstream 454399 20769476 ~ 20841778 (+)
G236461 LOC102792843 other downstream 77444 21407927 ~ 21422915 (+)
G236459 LOC103360213,LOC106936810,LOC103477369,LOC103473932,LOC106933094,LOC107835021,LOC108249964,LOC107380983,LOC108250351,LOC108242155,LOC108250349,LOC108229490 other downstream 93802 21424285 ~ 21634001 (+)
G236530 NA other downstream 292015 21622498 ~ 21623439 (+)
G236466 NA other downstream 295455 21625938 ~ 21633849 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025823 NA non-coding NC_007114.7 CM002887.2 58188654 ~ 58193860 (+)