G236459 (LOC103360213,LOC106936810,LOC103477369,LOC103473932,LOC106933094,LOC107835021,LOC108249964,LOC107380983,LOC108250351,LOC108242155,LOC108250349,LOC108229490)


Basic Information

Item Value
gene id G236459
gene name LOC103360213,LOC106936810,LOC103477369,LOC103473932,LOC106933094,LOC107835021,LOC108249964,LOC107380983,LOC108250351,LOC108242155,LOC108250349,LOC108229490
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21424285 ~ 21634001 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320828
ttgcagtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactcaggagtgaagctactCTCAGCGGGACTGAAGGATCctctctggagactggacactctcagggtggagcctgctggagtcagatggttgacaccaggtctgaggaagtattcctgtgaacttacactggacacaaacacagtgaacagaagactcaaactgtctgacaacaacaggaaggtgacattaGTGAGGGAgtatcagccatatcctgatcatccagagaggtttgactatcttcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttgagaggagaggagtggttcatatatcagtgagttacagaggaatcagcaggAAAGGAGACAGTAGAGACTGTTTGTTTGGAcgtaatgatcagtcctggagtctgatctGTTCTGATGGTCGTTACTCTGTCTGTCACAATAACAGAGaaacatccatctcct
>TU320829
aagtagctcaCAGACCAATCAGGGAACAGTCTggtacatcaagaagaagatcagtgggaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgatcgttCTCTAGTGGAGGAGATCCAACAGTACCTGAGTTCAGGACGTCTCTCCAcagataaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaagaagatctggacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactgagtggctgtaatctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacaacccgcaggattcaggagtgaagctgatctctgttggactgaagagtccacactgcaaactggagactctcagTCTGTCGggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgaggtccaacccctcccatctgagagagctggacctgagctacaatcatccaggagattcaggagtgaagctactCTCAGCAGGACTGAAGGATCctctctggagactggacactctcaggtacaaACACTGATAAACATCTCTAGGAACTAAAATGATAACTCCCATttgttaataattgatgtaGTTCAGACACATCTCTGTATGTTGAAGgaaatgtcagtgttttttttcttttccggGATCAAATCAGTTTCAACTTGACAGAGAAAGGTCCAGGACAGGTTTAGCCTAGCTCAAAGCAGTGTGCTTTCTACGCTGTGAGAAgagtgtgtggatgaagcattaatCTACTCTTTCGGCAGACTAGTTAGCAAGCTGTTTAAAATGTCAGTTGCCGGTGCTGCGTGGCTCATGTGATCGAACATAGACGTACACTGATGCCTGGACCAATTCTTGTACAAAGTTCCTCTTGTGCTGGGAGAGTACCACCTAAGTTCAAAAAGTCCCTCAAAATGCTTTTTCCTAGTTCCAGCGGTGC
>TU320830
aagtagctcaCAGACCAATCAGGGAACAGTCTggtacatcaagaagaagatcagtgggaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgatcgttCTCTAGTGGAGGAGATCCAACAGTACCTGAGTTCAGGACGTCTCTCCAcagataaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaagaagatctggacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactgagtggctgtaacctgtcagagagaagctgtgaagctctgtcttcagttctcagctcccagtcctctagtctgagagagctggatctGAGTaccaacaacctgcaggattcaggagggaagctgatctctgttggactgaagagtccacactgcacactggagactctcagactgagtggctgtaatctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacaacccgcaggattcaggagtgaagctgatctctgttggactgaagagtccacactgcaaactggagactctcagTCTGTCGggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgaggtccaacccctcccatctgagagagctggacctgagctacaatcatccaggagattcaggagtgaagctactCTCAGCAGGACTGAAGGATCctctctggagactggacactctcagATGTGAAGTTAATGAAAGAAAGGTGGATGTACTTTTTCTTCACATGATGAGCAGCTTTTGG
>TU320831
atgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactgagtggctgtaacctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaccaacaacctgcaggattcaggagggaagctgatctctgatggactgaagagtccacactgcacactggaaaCCCTCAGactgagtcgctgtaacctgtcagagagaagctgtgaagctctgtcctcagttctcaggtcccagtcctctagtctgagagagctggaactgagtaacaacaacctgcaggattcaggagggaagctgatctctgatggactgaagagtccacactgcacactggagactctcagactgggtggctgtaatctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacgacCTACAcgattcaggagggaagctgatctctgatggactaaagagtccacactgcacactggatactctcagtttgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactcagaATTGTATCTACTCTCAGCAGGACTGAAGGATCCTttctggagactggacactcttAGGGTGGAGCCTGCTGAAGTCAGATGGATTGACACCAGGTCT
>TU320835
atgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactgagtggctgtaacctgtcagagagaagctgtgaagctctgtcttcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacaacctgcaggattcaggagggaagctgatctctgatggactgaagagtccaaaCTGCAAACTGGAGAGTCTCAGtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactcaggagtgaagctactCTCAGCGGGACTGAAGGATCctctctggagactggacactctcagggtggagcctgctggagtcagatggttgacaccaggtctgaggaagtattcctgtgaacttacactggacacaaacacagtgaacagaagactcaaactgtctgacaacaacaggaaggtgacattaGTGAGGGAgtatcagccatatcctgatcatccagagaggtttgactatcttcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttgagaggagaggagtggttcatatatcagtgagttacagaggaatcagcaggAAAGGAGACAGTAGAGACTGTTTGTTTGGAcgtaatgatcagtcctggagtctgatctGTTCTGATGGTCGTTACTCTGTCTGTCACAATAACAGAGaaacatccatctcct
>TU320842
atgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactgagtggctgtaacctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaccaacaacctgcaggattcaggagggaagctgatctctgatggactgaagagtccacactgcacactggaaaCCCTCAGtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactcaggagtgaagctactCTCAGCGGGACTGAAGGATCctctctggagactggacactctcagggtggagcctgctggagtcagatggttgacaccaggtctgaggaagtgtaagtctgtttttaatttcattca
>TU320843
aagtagctcaCAGACCAATCAGGGAACAGTCTggtacatcaagaagaagatcagtgggaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgatcgttCTCTAGTGGAGGAGATCCAACAGTACCTGAGTTCAGGACGTCTCTCCAcagataaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaagaagatctggacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactgagtggctgtaacctgtcagagagaagctgtgaagctctgtcttcagttctcagctcccagtcctctagtctgagagagctggatctGAGTaccaacaacctgcaggattcaggagggaagctgatctctgttggactgaagagtccacactgcacactggagactctcagactgagtggctgtaatctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacaacccgcaggattcaggagtgaagctgatctctgttggactgaagagtccacactgcaaactggagactctcagtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactcaggagtgaagctactCTCAGCGGGACTGAAGGATCctctctggagactggacactctcagggtggagcctgctggagtcagatggttgacaccaggtctgaggaagtgtaagtctgtttttaatttcattca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320828 False 569 lncRNA 0.49 3 21609171 21612252
TU320829 True 1090 lncRNA 0.47 3 21424285 21435060
TU320830 False 904 lncRNA 0.49 5 21424285 21435565
TU320831 False 819 TUCP 0.52 6 21604950 21634001
TU320835 False 820 TUCP 0.49 5 21604950 21612252
TU320842 False 503 TUCP 0.52 4 21604950 21611817
TU320843 False 915 lncRNA 0.50 5 21424285 21611817

Neighbor

gene id symbol gene type direction distance location
cdk15 cdk15,LOC100710713 coding upstream 31875 21372615 ~ 21392410 (+)
dph3 dph3,LOC107559917,LOC105022091,LOC107660145 coding upstream 52381 21367445 ~ 21371904 (+)
LOC120554662 NA coding upstream 132062 21289363 ~ 21292223 (+)
LOC120554666 NA coding upstream 232840 21165803 ~ 21191445 (+)
LOC120554012 NA coding upstream 258731 21157961 ~ 21165554 (+)
G236439 NA non-coding upstream 34140 21388470 ~ 21390145 (+)
G236443 NA non-coding upstream 36947 21375437 ~ 21387338 (+)
G236438 NA non-coding upstream 45851 21376477 ~ 21378434 (+)
G236492 NA non-coding upstream 50906 21373121 ~ 21373379 (+)
G236455 NA non-coding upstream 93802 21296177 ~ 21330483 (+)
G236531 NA non-coding downstream 4277 21638278 ~ 21646714 (+)
G236472 NA non-coding downstream 35572 21669573 ~ 21676155 (+)
G236475 NA non-coding downstream 57854 21691855 ~ 21693173 (+)
G236473 NA non-coding downstream 100536 21734537 ~ 21738932 (+)
G236461 LOC102792843 other upstream 1370 21407927 ~ 21422915 (+)
G236467 NA other upstream 63050 21302326 ~ 21361235 (+)
LOC120554011 cd59,LOC102793758,LOC101486506,LOC100705993,LOC104934006,LOC103366567 other upstream 346489 20976072 ~ 21077796 (+)
zdbf2 NA other upstream 459700 20956949 ~ 20964585 (+)
G236394 NA other upstream 507508 20912655 ~ 20916777 (+)

Expression


Co-expression Network