G236461 (LOC102792843)


Basic Information

Item Value
gene id G236461
gene name LOC102792843
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21407927 ~ 21422915 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU320853
cagcagacccccgtctctggacggagaccagtgaaggatattagaagcacttttccggtgatcactaactttactgcgcagcctccaactgagagagacagcgtaaatgtgacgtgagcaacgtgtctgaaagtgtgaagtcttctggtagctgtgccgagagaaatctcaatcattcccaatcttacagagacggagagcgtaggtatatgtaaggagataacataggcacaggctaattactgatcactaacatgctagttaacattagtaattactgatcactaacatgctagttaacattagtaattactgatcactaacatgctagttaacattagtaattactgatcactaacatgctagttaacattagtcattaaacctaaacagataatggaagtccaaactgcctgtgagcttctcctgtactatacggtaattcctctactgtgtgacagtaagtctcgtggttatgacccaatcgttagcctatttttataaaagcgtctgctacggagccataacgtgagctacaaggacccatcagagaccagaccctgctgaacctgaacctaTCTTGTGTCTATGAAGTGTCCATGGAGCCACcgctactttaaaaaagtaggcGACCTGGAAGGGAGAGGCAAATCgaaatggaggagagaggatTGATGGAGAGACTTGAATGGCAGAAGGAGAGAATAGCGATGGGAAGGGAAATAGAAATGTTAAGGAGAAGACTGAGgatccagcagagaccagagtctcctgaacctgaacccagctgtgtgtcctttaaGAGCGACCGGTCAAATGAACGCTTTATTCAGTTTAAAGGTCAACAACCCTCTGCTGAAAAGAGgacccatcagagaccagagtctcctggacctgaacccagctgcGTGTCCTTCAAGAGTGACCCGGTCATATCAACGCTTTATTGACTTTAGAGGTCAACAACCCTCTGCTGAAAAGAGGATCCATCAGAGACCAGACTCTGctggacctgaacccagctgtgtgtccttcaagAGTGACCGGTCATATCAACGCCTCATTGAATTTAAAGGAGAGCAACCCTCTGCTGAAAAGAGagtggaccaggacagctcagaggttcccagtggtcagtctgcccagcagcatcaaaTACACCTGGACTCCATCtttatgctgctggaggagaacatcgtcacttttgtgaagaacgagctgaagaagatccagaagcttttgagtccagattacccagaatgctcaGAGAGTAAGAGGGAGaatgaggatgaagagcagaagaggaacagagaggcatttctgaagatcacactgcacttcctgaggagaatgaagcaggacgagctggctgaccgtctgcagagcaGAATTCCAGCTGGAGTTTGTAAGCGTAAACTCAAATCTAACCTAAACaagaagttccagtgtgtgtttgaggggattgctaaa
>TU320854
gcattattggcatttaattgttaataattaggcctacagacatattcatattaatattatattttatgcagGGAGACTTTACCTGAACATGTGACcctcaataaatgtgtttttctatcaggatccagcagagaccagagtctcctgaacctgaacccagctgtgtgtcctttaaGAGCGACCGGTCAAATGAACGCTTTATTCAGTTTAAAGGTCAACAACCCTCTGCTGAAAAGAGgacccatcagagaccagagtctcctggacctgaacccagctgcGTGTCCTTCAAGAGTGACCCGGTCATATCAACGCTTTATTGACTTTAGAGGTCAACAACCCTCTGCTGAAAAGAGGATCCATCAGAGACCAGACTCTGctggacctgaacccagctgtgtgtccttcaagAGTGACCGGTCATATCAACGCCTCATTGAATTTAAAGGAGAGCAACCCTCTGCTGAAAAGAGagtggaccaggacagctcagaggttcccagtggtcagtctgcccagcagcatcaaaTACACCTGGACTCCATCtttatgctgctggaggagaacatcgtcacttttgtgaagaacgagctgaagaagatccagaagcttttgagtccagattacccagaatgctcaGAGAGTAAGAGGGAGaatgaggatgaagagcagaagaggaacagagaggcatttctgaagatcacactgcacttcctgaggagaatgaagcaggacgagctggctgaccgtctgcagagcaGAATTCCAGCTGGAGTTTGTAAGCGTAAACTCAAATCTAACCTAAACaagaagttccagtgtgtgtttgaggggattgctaaa
>TU320855
cagcagacccccgtctctggacggagaccagtgaaggatattagaagcacttttccggtgatcactaactttactgcgcagcctccaactgagagagacagcgtaaatgtgacgtgagcaacgtgtctgaaagtgtgaagtcttctggtagctgtgccgagagaaatctcaatcattcccaatcttacagagacggagagcgtaggtatatgtaaggagataacataggcacaggctaattactgatcactaacatgctagttaacattagtaattactgatcactaacatgctagttaacattagtaattactgatcactaacatgctagttaacattagtaattactgatcactaacatgctagttaacattagtcattaaacctaaacagataatggaagtccaaactgcctgtgagcttctcctgtactatacggtaattcctctactgtgtgacagtaagtctcgtggttatgacccaatcgttagcctatttttataaaagcgtctgctacggagccataacgtgagctacaaggtaatggagccttttatacattgtcgtgtttctttagaaataaacaacggacaaaaagagtctttaaacgcttccaGATGGAAAGTGGGCGGTTCCTCTTGTTTCCtgttcagtttcctgtcacttTCCGGAGTTTGTGACGCAGTTTATTCTCTCCGTGTGAAGCTCCAGCTGAAGgacccatcagagaccagaccctgctgaacctgaacctaTCTTGTGTCTATGAAGTGTCCATGGAGCCACcgctactttaaaaaagtaggcGACCTGGAAGGGAGAGGCAAATCgaaatggaggagagaggatTGATGGAGAGACTTGAATGGCAGAAGGAGAGAATAGCGATGGGAAGGGAAATAGAAATGTTAAGGAGAAGACTGAGgatccagcagagaccagagtctcctgaacctgaacccagctgtgtgtcctttaaGAGCGACCGGTCAAATGAACGCTTTATTCAGTTTAAAGGTCAACAACCCTCTGCTGAAAAGAGgacccatcagagaccagagtctcctggacctgaacccagctgcGTGTCCTTCAAGAGTGACCCGGTCATATCAACGCTTTATTGACTTTAGAGGTCAACAACCCTCTGCTGAAAAGAGGATCCATCAGAGACCAGACTCTGctggacctgaacccagctgtgtgtccttcaagAGTGACCGGTCATATCAACGCCTCATTGAATTTAAAGGAGAGCAACCCTCTGCTGAAAAGAGagtggaccaggacagctcagaggttcccagtggtcagtctgcccagcagcatcaaaTACACCTGGACTCCATCtttatgctgctggaggagaacatcgtcacttttgtgaagaacgagctgaagaagatccagaagcttttgagtccagattacccagaatgctcaGAGAGTAAGAGGGAGaatgaggatgaagagcagaagaggaacagagaggcatttctgaagatcacactgcacttcctgaggagaatgaagcaggacgagctggctgaccgtctgcagagcaGAATTCCAGCTGGAGTTTGTAAGCGTAAACTCAAATCTAACCTAAACaagaagttccagtgtgtgtttgaggggattgctaaa
>TU320856
GCTTCATTGAATTTAAAGGTCAACAACCCTCTGCTGAAAAGAGagtggaccaggacagctcagaggttcccagtggtcagtctgcccagcagcatcaaaTACACCTGGACTCCATCtttatgctgctggaggagaacatcgtcacttttgtgaagaacgagctgaagaagatccagaagcttttgagtccagattacccagaatgctcaGAGAGTAAGAGGGAGaatgaggatgaagagcagaagaggaacagagaggcatttctgaagatcacactgcacttcctgaggagaatgaagcaggacgagctggctgaccgtctgcagagcaGAATTCCAGCTGGAGTTTGTAAGCGTAAACTCAAATCTAACCTAAACaagaagttccagtgtgtgtttgaggggattgctaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320853 False 1470 TUCP 0.46 8 21407927 21422915
TU320854 False 843 TUCP 0.46 6 21410812 21422915
TU320855 True 1647 TUCP 0.46 8 21407927 21422915
TU320856 False 413 TUCP 0.47 4 21414237 21422915

Neighbor

gene id symbol gene type direction distance location
cdk15 cdk15,LOC100710713 coding upstream 15517 21372615 ~ 21392410 (+)
dph3 dph3,LOC107559917,LOC105022091,LOC107660145 coding upstream 36023 21367445 ~ 21371904 (+)
LOC120554662 NA coding upstream 115704 21289363 ~ 21292223 (+)
LOC120554666 NA coding upstream 216482 21165803 ~ 21191445 (+)
LOC120554012 NA coding upstream 242373 21157961 ~ 21165554 (+)
LOC120554659 NA coding downstream 180577 21603492 ~ 21605036 (+)
LOC120554665 NA coding downstream 189004 21611919 ~ 21612646 (+)
G236439 NA non-coding upstream 17782 21388470 ~ 21390145 (+)
G236443 NA non-coding upstream 20589 21375437 ~ 21387338 (+)
G236438 NA non-coding upstream 29493 21376477 ~ 21378434 (+)
G236492 NA non-coding upstream 34548 21373121 ~ 21373379 (+)
G236441 NA non-coding upstream 62759 21246564 ~ 21345168 (+)
G236501 NA non-coding downstream 7265 21430180 ~ 21617586 (+)
G236506 NA non-coding downstream 62939 21485854 ~ 21525535 (+)
G236507 NA non-coding downstream 67379 21490294 ~ 21491732 (+)
G236479 NA non-coding downstream 70195 21493110 ~ 21809546 (+)
G236508 NA non-coding downstream 85573 21508488 ~ 21822018 (+)
G236467 NA other upstream 46692 21302326 ~ 21361235 (+)
LOC120554011 cd59,LOC102793758,LOC101486506,LOC100705993,LOC104934006,LOC103366567 other upstream 330131 20976072 ~ 21077796 (+)
zdbf2 NA other upstream 443342 20956949 ~ 20964585 (+)
G236394 NA other upstream 491150 20912655 ~ 20916777 (+)
cavin2b NA other upstream 520558 20845648 ~ 20887369 (+)
G236459 LOC103360213,LOC106936810,LOC103477369,LOC103473932,LOC106933094,LOC107835021,LOC108249964,LOC107380983,LOC108250351,LOC108242155,LOC108250349,LOC108229490 other downstream 1370 21424285 ~ 21634001 (+)
G236530 NA other downstream 199583 21622498 ~ 21623439 (+)
G236466 NA other downstream 203023 21625938 ~ 21633849 (+)

Expression


Co-expression Network