LOC120554014


Basic Information

Item Value
gene id LOC120554014
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21300281 ~ 21557021 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU321003
TCTGTGACACAGTTTTTTCTCTCCGTGTGGAGCTCCAGCTGAAGgacccatcagagaccagacccTGCTGAACCTGAAAACAGCTGTATGTCTATGAAGAGTGTCCGGTCCATGGAGACACCACTACTTTAAAAAAGGAGGTGACCTGTAAGGGACAGGCCAATTAAAATGgtggagaggagaaggaagaggcCAAGACAGAAGGAAAGGGAGGAACATATTGAAATAAAGAGCCGAAGACAGAGgatccatcaaagaccagactctgctggacctgaacccagctgtgtgtcctttaaGATTGACCAGTCACATCAAGGCCTCATTGACTTTAAAGGAGAGCAACCCTCTGCTGAAAAGAGGATCCATCAGAGACCAGACtctgctgaacctgaacccagctatGTGTCCTTCAAGAGTGATCAGTCACATCAAGGCCTCATTGACTTTAAAGGAGCGCAACCCTCTGCTGAAAAGCGGATCCATGAAAGACCAGACTCTGctggacctgaacccagctgtgtgtcctttaaGAGTGACCAGTCACATCAAGGCCTCATTGACTTTAAAGGAGAGCAACCCTCTGCTGAAAAGAGGATCCATCAGAGACCAGCCTCtactgaacctgaacccagctgtgtgtccttcaagAGTGACCGGTCACATCAAGGCCTCATTGACTTTAAAGGAGCGCAACCCTCTGCTGAAAAGAGagtggaccaggagagATCAGAGTTTCCCAGTGATCAGACTGCCCATcagcatcaaacacacctggactccatatttatgctgctggaggatGACATCGTCACTTTTGTGAAGAAcgagctgaagaagatccaaaaggttctgagtccagattacccagaatgctcagagagtcagaggaagGGTGAGGATGAAGATCAGAggagcagagaggcatttctgaagatcacactgcacttcctgaggagaatgaagcaggacAAGCTGGCTGACCGTCTGCAGAACAGTAAG
>XM_039792562.1
CTCTTGTTTCCTGTTTAAAGTTTACTTTCACTTTCCAGAGTCTGTGACACAGTTTTTTCTCTCCGTGTGGAGCTCCAGCTGAAGgacccatcagagaccagacccTGCTGAACCTGAAAACAGCTGTATGTCTATGAAGAGTGTCCGGTCCATGGAGACACCACTACTTTAAAAAAGGAGGTGACCTGTAAGGGACAGGCCAATTAAAATGgtggagaggagaaggaagaggcCAAGACAGAAGGAAAGGGAGGAACATATTGAAATAAAGAGCCGAAGACAGAGgatccatcaaagaccagactctgctggacctgaacccagctgtgtgtcctttaaGATTGACCAGTCACATCAAGGCCTCATTGACTTTAAAGGAGAGCAACCCTCTGCTGAAAAGAGGATCCATCAGAGACCAGACtctgctgaacctgaacccagctatGTGTCCTTCAAGAGTGATCAGTCACATCAAGGCCTCATTGACTTTAAAGGAGCGCAACCCTCTGCTGAAAAGCGGATCCATGAAAGACCAGACTCTGctggacctgaacccagctgtgtgtcctttaaGAGTGACCAGTCACATCAAGGCCTCATTGACTTTAAAGGAGAGCAACCCTCTGCTGAAAAGAGagtggaccaggagagctCAGAGGTTCCCAGTGGTCAGTCTGCTCAGCAGCATCAAACATACctggactccatatttatgctgctggaggaggacATCGTCACTTTTGTGAAGAATGAGCTGAAGATAATCCAGAAGGTTGTGagtccagattacccagaatgcttaGAGAGTCAGAAGCAGGGTGAGGATGAAAtgcagaggaggagcagagaggcatttctgaagatcacactgcacttcctgaggagaatgaagcaggacAAGCTGGCTGACCGTCTGCAGAGCAGATGTCCTGCTGGAGTTTGTAAGCGTGAACTAAAATGTAACCTAAACaagaagttccagtgtgtgtttgaggggattgctaaagcaggaaaccaAACCATACTGAATCAGATGTTTACCGAGATCTACATCACAAAGCGAGGGACTGCAGatgatgaacatgaggtcagacagattgaaacagcatccaggaaacaagatagaccagaaacaacaatcagacgagaagacatctttaaaactCCATCTGGAAGAGCTGAACCgatcagaacagtgatgacaaagggagtggctggcatcgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacatccagttcacatttccattcaccttcagagagctgaatgtgctaAAAGAGAAgaagtacagcttggtggaacttgttgattacttctttagtgaaaccaaagaagcaggaatctgcaggtttgaagagttcccaattgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttcctcaacactgagatcctgactgatgttacagtgtccacctcagtggatgtgctgctgacaaacctcatcagggaaaactgcttccctctgctccgcctctggataaccacacacgctgctgcagccaatcagatccctcctgggtGTGTTGACATgatgacagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagaaattcagagatgaggagcaggccaacagaattatctcccacatcaagacatcacgaagcctccatatcatgtgtcacatcccagtcttctgctggatcactgctacagttctggaggatGTGTTGAAGagcagagagggaagagagctgcccaagaccgtgactgagatgtacatccacttcctggtggttcagtccaaacggaagtacatcaagtatgatggaggagctgagacagATCCACACTGGAGTCCAGAAAGCAGGAAGATGATCGAGTCTCTaggaaaactggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcaAAGCAGCCTCAATGtgctcaggagtgttcacacagatctttaaagaggagagaggactgtaccagAACCAGGTGTTCAGCTTtgtccatctgagtgttcaggagtttctggctgctcttcatgttcatctgacattcaccaagtctggagtcaacctgctgtcaggaaaacaaacaacatcaacacagttctaccagagtgctgtggacgaggccttacagagtccaaatggacacctggacttgttcctccgcttcctcctgggtctttctctgcagaccaatcagaatctcCTACGAGGTCTgatgacacagacaggaagtagctcaGAGACCAATCAAGAAACAGTCaagtacatcaagaagaagatcagtgcgaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaacttaATAATCGATCTCTAGTGAAGGAGATCCAACAGTCCCTGAAATCAGGACGTCTCTCCACAGAtgaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaggAAGATCTGgatgtgtttgacctgaagaaatatggtgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactgagtggctgcaatctgtcagagagaagctgtgaagctctgtcctctgttctcaaGTCcaagtcctctagtctgagagagctggacctgagtaacaacaacctggaATCAGGAGCAAAGCTGATCActgttggactgaagagtccacactgcacactggagactctcaggttgggtggctgtaacctgtcaaagagtagctgtgaagctctgtcctcttttcttagctcccagtcctctagtctgagagagctggatctgagtaacaacaacctgcaggattcaggagtaaagctgatctctgttggactgaagagtccacactgcaccctagagactctcagtctgtcaggctgtctgatctcagaggaaggctgttctGCTCTGGTCTCGcctctgagctccaacccctcccatctgagagaactggacctgagctacaatcatccaggagactcgGGAGTGAAGCTACTGTCAGCGGGACTGAAGGATCctctctggagactggacactctcagcgtggagcctgctggagtcagatggttgacaccatgtctgGTTCGAGATCAGGCGTCCCACCACCCGCTATTAAGCCTGTCTCCTCAGCTTCTAGGCGCTGCATCACCTCCTCTTCAGCTGGAGAGTTTGCGCTTCTGCGTTGCGGGCTCACAGTTTTATGTAAAGAATGGTGACGGTCTCCTGGGATCCGTTTCCTCCCAGCGGGTCGCTGTTGCTGCGTCCTCGCTGCACTCTGAAGCGCCGGACCTGCAGCGTGTGGAACCAGTGAGGCTGGGGGCCCGAGGAGGACCGGCTGAGTTCAGCAGCATGGATCAGTGTGAGGACAGTGAAACCACTCTGAGTGGGGAACAGGACCGCCAGACCAAAGCTCAGAGgacCATCCTGCTACGGGACTCTGATGAATCTGAACcagaacccagctgtgtgtccatgatGAGTGACCGGTCTAAGGATTTGCCGCTGTGGTTTAAAAATCAAGCTTCACCAATAGCAGAagtggaccaggagagctTAGATGTTCCCATTGTTCACTCTGCCCAGCAACATCAAATACACATGGACTCCATCtttatgGTGCTGGAGGAGAACATCGTCACTTTTGTGAAGAACGAGCTAAAGAAGATTCAGAAGGTTCTGagtccagattacccagaatgctcagagagtcagagggagggtgaggatgaagagcagaggagcaACAGAGAGGCATTTATGAAGATCACACTTcacttcctgaggagaatgaagcaggaTGAGCTGGCTGACTGTCTGCAGCGCAGTAAGAGGATTTCTCTaatgacacaccaacccgattatcaaCGTCGGATAGTCTGGCAAGGAAGTCTTTCTGGAGTTTGTAAGCGTAAACTCAAATCTAACCTGAACaagaagttccagtgtgtgtttgaggggattgctaaagcaggaaatccaacccttctgaatcagatgttcacaaagatctacatcacaaagggagggactgcagaggtcaatgctgaacatgaggtcagacagattgaaacagcatccaggaaaTCAGACAAgccagaaacaacaatcagacaagaagacatctttaaaactccacctggaagagataaaccaatcagaacagtgatgacaaagggagtggctggcatcggtaaaacagtcttaacacagaagttcactctggactggactgaagacaaagccaaccaggacatccagttcacatttccattcaccctcagagagctgaatgtcttgaaagagagaaagtacagcttggtggaactttttgattacttctttagtgaaaccaaagaagcaggaatctgcaggtttgaagagttcccggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttcctcaaCACTGAGATCCTTACTGATGTTACaaagtccacctcagtggatgTGCTGCTGATAAACCTCATTAGGGGgaatctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttcactgatccacagaaggaggagtacttcaggaagagattcacagatgaggagcaggccaacagaatcatctcccacatcaagacatcacgaagcctccatatcatgtgccacatcccagtcttctgctggatcactgctacagttctggaggatgtgttgaagaccagagagggaggagggctgcccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaagtgaagaacatcaagtatgatggaggagctgagacagATTCACACTGGAGTCCAGACACCAGGAAGATGATCTGGTCTCTGGGAAAATTGGcgtttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagagtactcaggagtgttcacgcagatctttaaagaggagagaggactctaccaggacaaggtgttctgcttcatccatctgagtgttcaggagtttctggctgctcttcatgtccatctgacattcaccaactctggggtcaacctgctgtcagaagaccaaacaacatcaacacagttctaccagagtgctgtggacaaagccttacagagtccaaatggacacctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcagaatccctTACGAGGACTGAAGACACAGAATATTAAGATTACCTTACAAGGTCTGCGGACACAAAAAGGAAGCAGCTCCCAGACTATTAAGATTCCCTTAAAAGGTCTactgacacagacaggaaataGCTCAAAGACTAGTAAGATTCTCTTCGGAGGACtaaagacacagacaggaagtagctcaGAGACCAATCAGACTCTCTCACGAGAACTgaagacacagacaggaagtagctcaGAGACCAATCAGGCTCTCTTACGAGACCTGATGACAAAGATGAGAATTAGCTCAGAGTCCAAAGAGGAAACAGTTgagtacatcaagaagaagatcagtgagaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgaccgttctctagtggaggagatccaacagtacctgagttcaggaagtctctccacagatgaactgtctcctgctcagtggtcagctctgggcttcatcttactgtcatcagaagaagatctggacgtgtttgacctaaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaaacCTCCAACCAAGCACTactgagttGGTGtaatctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagacttctagtctgagagagctggacctgagtaacaacaacctgcaggatttaGGAGTTAAGCTGAtctctgttggactgaagagtccacactgcacactggagactctcagtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccctcccatctcaGAGAGCTTGACCTGAGCTATAATCATCCAGGAGATTCAGGTGTGAAGCGACTGTCAGCAGGACTGAAGGATCCTCTCTGGAGATtggacactctcagggtggagcctgctggagtcagataTTTGAGACCtggtctgaggaagtattcctgtgaactcacattcgacacaaacacagtgaacagaaacttcatactgtctgacaacaacagaacGGTAACATATGTGGAGgaggatcagccatatcctgatcatccagagaggtttgactcctatcatcagctgctgtgtagagatggtctgactggtcgcggTTACTGGGAGGTTGACACGAGAGGAGATGTTCATATagcagtgagttacagaggaatcagcaggAGAGTTGACAGTGATGACTGTTGGTTTGGATATAacgatcagtcctggagtctgatctGCTCTGATGGTCGTTACTCTGTCTGTCACAATAACAGAAaaacatccatctcctcctcctctgtctctggtagaattgcagtgtatgtggactgtcctgctggctctctgtccttctacacagtctcttttgactcactgatccacctccacactgtcaacaccacattcactcagcctctttATCCTGGGTTTGGGATCTGgtctggttcctcagtgtctctgtgttgtgtgtaggACAGtgagtctcctcctgtttctcaatgttgatcagttgagtctgtacaggatcacacttacagaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU321003 False 1002 TUCP 0.49 8 21538502 21556981
XM_039792562.1 True 7057 mRNA 0.48 23 21300281 21557021

Neighbor

gene id symbol gene type direction distance location
LOC120554641 LOC103473932 coding downstream 150918 21126894 ~ 21149363 (-)
dytn NA coding downstream 225026 20965938 ~ 21075255 (-)
ftcd ftcd coding downstream 297012 20990890 ~ 21003269 (-)
vps16 vps16 coding downstream 432481 20853565 ~ 20867800 (-)
LOC120554361 NA coding downstream 498011 20794346 ~ 20802270 (-)
LOC120554016 NA coding upstream 94945 21651966 ~ 21691088 (-)
LOC120554648 NA coding upstream 143684 21700705 ~ 21725016 (-)
G236692 NA non-coding downstream 53205 21193592 ~ 21247076 (-)
G236695 NA non-coding downstream 65663 21217717 ~ 21234618 (-)
G236697 NA non-coding downstream 70014 21226798 ~ 21230267 (-)
G236693 NA non-coding downstream 86909 21193997 ~ 21213372 (-)
LOC120554675 NA non-coding downstream 101034 21191719 ~ 21199247 (-)
LOC120554670 NA non-coding upstream 611 21557632 ~ 21559040 (-)
G236627 NA non-coding upstream 16744 21573765 ~ 21651255 (-)
G236740 NA non-coding upstream 50414 21607435 ~ 21617571 (-)
G236595 NA non-coding upstream 51759 21608780 ~ 21622208 (-)
G236623 NA non-coding upstream 56972 21613993 ~ 21674364 (-)
LOC120554013 LOC103366577 other downstream 58104 21200996 ~ 21242177 (-)
arl11 NA other downstream 348416 20940988 ~ 20951865 (-)
LOC120554644 NA other downstream 379783 20892914 ~ 20920498 (-)
G236646 NA other downstream 436970 20862680 ~ 20863311 (-)
rgn LOC103371141 other downstream 446898 20843492 ~ 20853383 (-)
LOC120554015 NA other upstream 77827 21634848 ~ 21651918 (-)
G236611 NA other upstream 116671 21673692 ~ 21674838 (-)

Expression


Co-expression Network