LOC120553996


Basic Information

Item Value
gene id LOC120553996
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16176729 ~ 16183893 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792545.1
CGCGCCCCTCCACCTGAGTCCGTGACTGTCCGTCATCCTCACCATGCGTGGCATGACCTTAGACCGCATATCACTGCGATGACTTCGACAAGTTCACCTGCAGCTACCAAATCTCAAGAGTTTGAGGCCAGTGTTATTGCTGCTGCACAAGGCCTCATAAACGTGCTAACGCAAAAGCAGTATCAGCCCCTCAGTACAGCTCAAACACCGAGCATTACATCAGGCCTGAAGAGGTGTAGCTGAAGTGGATCGAGATGGCAGACTCGCGGCTCCAACATATAACGGCTCCTTCCATCGCTAGGCAGTTCATGGAAAGAATGTTAAGAAGGCTTCAGGAAGTTCTCCAACGTCAGCCAGTGGATTttgattatttaaattttattttaagccATGAAATGGAACTTGTGCATTCTTTTGCTAATGTAATACAACTGCCACAAGATGTTGTTCGTGCCTTGTCTGATATTTTAAGAATTCTTCTTTGCCAAGAGGAGCAGCAAAGACCTTTAGCGTCTTCATATGTAGAGGTTGTGGGGGGTGGTAGGGGACAACCAAAATTTGTTGTATCAAAAGAACATCTGCAACACCTCATTGATATGCAGCTGTCCATCCCCTGCATAGCTAAGCTACTGGGTGTCTGCAAAAGGACTGTGTTTCGACGGATGCGAGAGGAGGGACTATCAGTTAAGGGATCATACAGCAACCTGACAAATGAGGAACTGGACAGCCTTGTGCGTTCAGTTAAATTGAGGATGCCACATATTGGCTACAGAATGATGAAGGGCGAACTGCAAGCTATGGGACACCGTGTAAGATGGGAGCAGGTTTCAGCGTCCATGCACAGGGTGGATTCTGCAGGGATCTTTGAGAGATTTACAGGCTTGGGCTGTGTCGCTAGAAGAATATATTCCGTCAAGGGTCCCCACTCACTGGTCCACGTGGACACAAACCACAAACTTATCAGatATGGCATTGTCATCTTTGCCGGGATCGATGGTTATTCACGAAAGATCATGTACCTGGGTGCTTCTAACAACAACAAGGCATCAACAGCACTTGGCTTCTTCATGAGCTCTGTTGAAAAGTTTGGCTTCCCCATTAAGGTAATAGGAGTTAGAGGAGACCAAGGGGTAGAAAACGTTGGCATTGCGCATTGCATGTTCATGTTCACTGTTCGTGGCTGTGGCAGAGCAAGCTACATATCTGGAAAAAGTGTGCATAATCAAAGGGTGGAGCGCTTGTGGCGTGATGTGTGGATGGCGGTAACCTGTGTATATTACGAACTACTTCACAgtcttgaagaggattgccTGCTAGATCCCTCCAACagtctgcatttattttgtgCACACTATGTATTTGTGCCACGCCTCCAGAGGGACCTTGAGACTTTCACAGAAGGATGGGATAACCATGCCATGCGAACTGAACAAAACCTGACTCCCAATCAACTTTGGACAATAGGACTTCTCCAGAACCCTGTGCCTGCTCCAGAGAACTTAGAGGATATACAAGATCTTTTCTTGGACTGCAACCATGACAGCATGACAGACGAGTCTGCCAGTGGCATAATTCTGCCACCCATCCAGTGCCCTCTGGAGTCTCAGGCTATGGCAGAACTAAGAACCGCCATTAACCCTATGGTTACCTCCCAGGACAATGGCAGAGACCTTTACAAGGCTGCACTTGACTATGTGATTATTCACGCATAAACATGGCAGGATAACacaaaaactaaaggtacataaccctaacaaagaatagtgactttcctgcctctctccagcatcatgcagcaagttttcttcatcacattggatgtctgcatcatctctaaatacaaatgaatgtggtgtttccattgctttgacctccattattttctgaaaaaacAGGAAGTCCACAGTTTAGCTATTGTAAAGATAgtgtttttcacaatttttttttttataactgtacataacctcagacatcttacctggacatgttggcatctcttttacctgt

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792545.1 True 2007 mRNA 0.45 8 16176729 16183893

Neighbor

gene id symbol gene type direction distance location
trnat-cgu_13 NA coding downstream 208543 15968114 ~ 15968186 (-)
LOC120554208 NA coding downstream 210144 15953868 ~ 15966585 (-)
LOC120553994 NA coding downstream 271699 15885644 ~ 15905030 (-)
trnaq-cug_39 NA coding downstream 341719 15834939 ~ 15835010 (-)
trnal-aag_20 NA coding downstream 342399 15834248 ~ 15834330 (-)
LOC120554198 NA coding upstream 105208 16289101 ~ 16310011 (-)
LOC120554221 NA coding upstream 172929 16356822 ~ 16365361 (-)
LOC120554797 NA coding upstream 190884 16374777 ~ 16374965 (-)
LOC120554247 NA coding upstream 196419 16380312 ~ 16386295 (-)
trnat-agu_40 NA coding upstream 202879 16386772 ~ 16386845 (-)
G235208 NA non-coding downstream 44483 16131586 ~ 16132246 (-)
LOC120554279 NA non-coding downstream 185334 15973575 ~ 15991395 (-)
G235151 NA non-coding downstream 293728 15882625 ~ 15883001 (-)
G235075 zbed1 non-coding downstream 510847 15660293 ~ 15665882 (-)
G235053 NA non-coding downstream 619313 15556638 ~ 15557416 (-)
G235215 NA non-coding upstream 16439 16200332 ~ 16200591 (-)
G235225 NA non-coding upstream 61234 16245127 ~ 16245397 (-)
G235242 NA non-coding upstream 137218 16321111 ~ 16321517 (-)
G235351 NA non-coding upstream 138995 16322888 ~ 16324236 (-)
LOC120554275 NA non-coding upstream 156904 16340797 ~ 16345265 (-)
LOC120554377 LOC103355861 other downstream 1162915 14966316 ~ 15013814 (-)
G234898 NA other downstream 1326992 14847834 ~ 14849737 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 1886686 14194312 ~ 14290043 (-)
G234405 NA other downstream 3222604 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 3883586 12278519 ~ 12293143 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 64801 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 142200 16326093 ~ 16352877 (-)
G235387 NA other upstream 428090 16611983 ~ 16616316 (-)
LOC120554263 NA other upstream 552293 16736186 ~ 16742288 (-)
trnat-cgu_19 NA other upstream 572100 16755993 ~ 16756065 (-)

Expression


Co-expression Network