LOC120554006


Basic Information

Item Value
gene id LOC120554006
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 19819866 ~ 19832208 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792554.1
ATGTGTAACGTAGAAAGTAAGCTGCACATCTGcagtcacacacagacggaGAGGAACAGAGAAGAGACCAGGATGGAGAAAGTTCTTCTGAGCGTCATCATCGCCGTGTCAGGGCTGAGTGCTGTCTCATCACCTGCCAGACGTCAGTATTATTTTGTGTATGATCAGAAGAACTTTACTGAAGCCCAAAGTTactgcagagagaaacacacagacctgGCAACTATAGACAACATGGACAATGTGAAGACCCTGAACAACATGGCAGATTCAAGCAAAATGGTCTACTTCATATACAGCTATCTAGCCTGGATAGGGCTGTACGATGACATGGACAGCTGGGAGTGGTCACTGTCAGAAAAAAGTTTCTACAAACCTGGGGAGACGGAGTTCAGACACTGGAAGACAGGAGAACCGAATAATAAATCCGGTAAAGAACACTGCACAGAGATGTATGATACCGGGCTATGGAACGACAACGATTGTGAAACCTCCAGGAGGGCAGTCTGCGTAGATGTCAGAGGGCCAAATTTGACTTTTATCTTCAATAACATCTCCATGAAGTGGACCCAGGCCCAGAGCTACTGCAGACAACACCACACAGACCTGGCCAGCATTAGAAACATGACGGAAAACCAGAAGGTACGTGATGTAGCTGCAGGACACAGTGTCTGGATCGGTCTTTTCAGAGAGTCCTGGAAGTGGTCGGATGGAAGTAACTCCTCATTCAGGTACTGGAGTCAGAAAACTAAGGAACCCAACAACAACCTAGGGGCCGAGGCTTGTGTGGCTGCAGACTTCGAAGTCTCTGGGAAATGGGAAGACTGGCCCTGTCACTACAGGAGAGCGTTCATTTGCTACGGTCCAGAAGTAGTGCCTGTTTCAAAGAAAGTGGTGAAAGTGAAGTTTGAGAACAAGAACAACCTGGATCTAAATGACCCTGCTGTGAAGAAGGCCATGTTGAAGCAGcTCAAACAGAAGCTCAGGGACCAGGGCCTGGACAACAATATCAAACTGAGCTGGAGGAAGCAGGCCGATGGAGAAGTCTTTCacaaggaagagaaagaggcaaagaagaggaagaagaaagatgAGCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792554.1 True 1101 mRNA 0.48 6 19819866 19832208

Neighbor

gene id symbol gene type direction distance location
LOC120554574 NA coding upstream 1383 19816765 ~ 19818483 (+)
sts sts coding upstream 87323 19712684 ~ 19732543 (+)
si:ch211-246m6.4 LOC103371115,LOC103149479,LOC104942297 coding upstream 212866 19602721 ~ 19607000 (+)
LOC120554004 NA coding upstream 220197 19585535 ~ 19599669 (+)
LOC120554051 xdh coding upstream 297197 19512902 ~ 19522669 (+)
LOC120554605 pudp coding downstream 7397 19839605 ~ 19851954 (+)
LOC120554034 NA coding downstream 196818 20029026 ~ 20034729 (+)
mxra5a NA coding downstream 426135 20258343 ~ 20271296 (+)
fam207a NA coding downstream 480316 20312524 ~ 20341903 (+)
LOC120554617 LOC108431163 coding downstream 491284 20323492 ~ 20325622 (+)
LOC120554317 NA non-coding upstream 35101 19756005 ~ 19784765 (+)
G236060 NA non-coding upstream 162596 19657041 ~ 19657270 (+)
G236057 NA non-coding upstream 164760 19654827 ~ 19655106 (+)
G236046 NA non-coding upstream 188410 19630758 ~ 19631456 (+)
G236045 NA non-coding upstream 189473 19629440 ~ 19630393 (+)
G236148 NA non-coding downstream 29895 19862103 ~ 19862319 (+)
G236176 NA non-coding downstream 217257 20049465 ~ 20049864 (+)
G236179 LOC104947167 non-coding downstream 237898 20070106 ~ 20070640 (+)
G236187 NA non-coding downstream 250820 20083028 ~ 20083281 (+)
G236189 NA non-coding downstream 262140 20094348 ~ 20094879 (+)
anos1a LOC103358938 other upstream 120971 19671872 ~ 19698895 (+)
G235778 NA other upstream 1638054 18176825 ~ 18181812 (+)
G235775 NA other upstream 1647912 18167286 ~ 18171954 (+)
LOC120554216 mpp4 other upstream 1853640 17953139 ~ 17966226 (+)
als2b NA other upstream 1881555 17882465 ~ 17938311 (+)
nlgn4xa nlgn4x,nlgn4a,nlgn4,LOC102297792,LOC102198379,LOC102795219 other downstream 64884 19897092 ~ 19986729 (+)
G236162 NA other downstream 164591 19996799 ~ 19997667 (+)
prkx prkx other downstream 376121 20208329 ~ 20234852 (+)
LOC120554192 adarb1,dhrsx,LOC103363325,LOC104961879,LOC106908010,LOC106908011,LOC103156197,LOC103156196 other downstream 523094 20355302 ~ 20377740 (+)
cd99 NA other downstream 551110 20383318 ~ 20406326 (+)

Expression


Co-expression Network