LOC120554009


Basic Information

Item Value
gene id LOC120554009
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20706392 ~ 20707535 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792557.1
atgatgatgatgaccacAGCGACTCTGCCGAGGAAGACGAATGGTCATCCGGGCGGTGTGCGTCAGAAGACGAAGAGACAAACACGACGCCGGACGGAGAAAAAGACTGCCACGGAGAAAGAGGGCGCGATGCCCGCGCACGACGCCGCGGGAGAAGAGGACTACGACGCCACTGACAACCGacaaagaGCAAAAAGGGCCAGAGAGGAGCAGGACgaggagcaggatgagcaggacgaggaggagaGCGAAAGGTTCGTGTCCAAAAACGGTGAAATAGAATGGTCCTCGACGACGTATCATCCCCGACGCCCTCGACCTCGCCGCCACGCCGCCGAAtacgaagaggaggaagaggaccaaCAACTGGACGATGAACGACAACAACATGACCAAGACGGCGACGACGAGGAGCAACAACAGGCTCCAGAGAGCCCCGGACCCACCGAGTACGCGACCACACGCGTCCGAGACATACTCTCCACGTTCGACCTGTTGGTCACGCGGCGCATACTAGAGATCGCGGTGACCGCCACGAACCTCGAGGGCCCCAGGAAATGCGGCAACGACTGGAAAATGACGGACGCGACGGAGCTGCGCGGCTACCTCGGGCTGCTGCTCCTCGCCGGAGTGTACAGGTCCCGAAACGAGGCCCTGGAGAGCCTGTGGCACGAGGAGAGCGGCAGGGCCATTTTCCGCGCCACAATGTCGCTGAAGCGATTCCACGCGCTCTCGCGACTGCTGCGATTCGACGACCGCGAGACGAGAGGCGCCAGACGAGCCTCGGACAAACTGGCGGCCATAACGAGGCGGTGGGACGCCTGCGCGGCGCGTCTGGCCTCCGCCTCTACAACCCGGCCCCGACGTGACTGTGGACGAGCAGCTGGTTCCCTTCGAGGTGAGTGTCGTCGCCGGTCTGGGAACTCGCTAGCCATCGGCGGCGGGGCTCAACTGAAGGCCGCCGGGGAtggataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792557.1 True 975 mRNA 0.63 2 20706392 20707535

Neighbor

gene id symbol gene type direction distance location
LOC120554008 NA coding upstream 11781 20692960 ~ 20694611 (+)
LOC120554612 rcan1,LOC103389732 coding upstream 226066 20459974 ~ 20480326 (+)
gyg2 NA coding upstream 287274 20409012 ~ 20419118 (+)
fam207a NA coding upstream 364489 20312524 ~ 20341903 (+)
LOC120554617 LOC108431163 coding upstream 380770 20323492 ~ 20325622 (+)
ebpl NA coding downstream 180434 20887969 ~ 20889752 (+)
eef1b2 eef1b2,LOC102792575 coding downstream 244617 20952152 ~ 20956272 (+)
LOC120554650 NA coding downstream 304959 21012494 ~ 21026525 (+)
LOC120554642 NA coding downstream 319517 21027052 ~ 21047316 (+)
LOC120554645 NA coding downstream 341979 21049514 ~ 21063917 (+)
LOC120554017 NA non-coding upstream 9860 20695924 ~ 20696532 (+)
G236334 NA non-coding upstream 28961 20677188 ~ 20677431 (+)
LOC120554584 NA non-coding upstream 43607 20661377 ~ 20662785 (+)
G236313 NA non-coding upstream 147793 20558255 ~ 20558599 (+)
G236312 NA non-coding upstream 148297 20557892 ~ 20558095 (+)
G236346 NA non-coding downstream 45081 20752616 ~ 20753017 (+)
G236355 NA non-coding downstream 79414 20786949 ~ 20837810 (+)
G236361 NA non-coding downstream 85931 20793466 ~ 20795400 (+)
G236364 NA non-coding downstream 93313 20800848 ~ 20871610 (+)
G236360 NA non-coding downstream 157979 20865514 ~ 20866411 (+)
LOC120554627 runx1,LOC104961881 other upstream 70470 20595095 ~ 20635922 (+)
LOC120554724 plcd4,LOC103363317 other upstream 195316 20487667 ~ 20511076 (+)
cd99 NA other upstream 300066 20383318 ~ 20406326 (+)
LOC120554192 adarb1,dhrsx,LOC103363325,LOC104961879,LOC106908010,LOC106908011,LOC103156197,LOC103156196 other upstream 328652 20355302 ~ 20377740 (+)
prkx prkx other upstream 471540 20208329 ~ 20234852 (+)
fmnl2b LOC101465085,LOC102790854,LOC102292591,LOC106517599,LOC100693318 other downstream 61941 20769476 ~ 20841778 (+)
cavin2b NA other downstream 138113 20845648 ~ 20887369 (+)
G236394 NA other downstream 205120 20912655 ~ 20916777 (+)
zdbf2 NA other downstream 249414 20956949 ~ 20964585 (+)
LOC120554011 cd59,LOC102793758,LOC101486506,LOC100705993,LOC104934006,LOC103366567 other downstream 268537 20976072 ~ 21077796 (+)

Expression


Co-expression Network