LOC120554012


Basic Information

Item Value
gene id LOC120554012
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21157961 ~ 21165554 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792560.1
TCCTCCTGCTACTACTACTCCCCCTCCTCTGGTTTGTGAAAACGGATATCCTTGGAATGGCGTCTGTAACTGTCTGGATGAATGGACCGGAATGAACTGCTCAGTAGCGAGTTTCTGCGAAGCCCAGAAGGTGGGGGAATTCAACTTCCCACGAACATTCATCGGCCGGTACGCTTATACTAATGAATTCTGTCCACCAGGAACGAGTGGCGCGGGTAAACCCCAGGCTTCGACCAGATGTTCCAAAGGGAACACACCCCCGAGTTTCCAGGATCTGCGCGTCCTCCAGTGTGGACAGACGCTCGCcaacataaaacaaaatCTGACCGGCCCAGCAGATTTAGAGACGCTGGCGGCGAGCGCTCGGATGCTGACGTCCTATTCTTACTATTCTCACTATCTGACGGCTGAAGAAGTGACGACGGCCGCTCAGATCGCCGACACGCTGCTGTCGTCTGTTAACGTCTCACAGAGCGTGAGGGAGGCAGCGGTAGCGACCGTCAGCAATATTATGTACTCCCACCCGCCAGACAACAACCAGGAAATCAACGCTACTCAGAGCCTGACAAGGACCTTGTCCAGGCTGTCGGTGGACCTGAGTCTGATCTCGGATCAGCTTGATTCTAAGGTGGTTCAGCCAAACATCGTGGTCCAGTCTGCTCAGATCTCGGCAGCCGACACTCAGGGAGTCCAGTTCACCGCGCTGTCAGGATGGTCATTTAGTTTCGTTGCCGACCGCATCCAGCTGGACACCAACACATCGGCCGTCGCCGTGGAAACTGGCTTCACTGCCGACGCGGTCGTTTACCTCAAGTTCCCCCCAGTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792560.1 True 829 mRNA 0.55 8 21157961 21165554

Neighbor

gene id symbol gene type direction distance location
LOC120554651 NA coding upstream 37191 21098583 ~ 21120770 (+)
LOC120554645 NA coding upstream 94044 21049514 ~ 21063917 (+)
LOC120554642 NA coding upstream 110645 21027052 ~ 21047316 (+)
LOC120554650 NA coding upstream 131436 21012494 ~ 21026525 (+)
eef1b2 eef1b2,LOC102792575 coding upstream 201689 20952152 ~ 20956272 (+)
LOC120554666 NA coding downstream 249 21165803 ~ 21191445 (+)
LOC120554662 NA coding downstream 123809 21289363 ~ 21292223 (+)
dph3 dph3,LOC107559917,LOC105022091,LOC107660145 coding downstream 201891 21367445 ~ 21371904 (+)
cdk15 cdk15,LOC100710713 coding downstream 207061 21372615 ~ 21392410 (+)
LOC120554659 NA coding downstream 437938 21603492 ~ 21605036 (+)
G236413 NA non-coding upstream 169550 20980566 ~ 20988411 (+)
G236407 NA non-coding upstream 190228 20966396 ~ 20967733 (+)
G236405 NA non-coding upstream 192214 20962588 ~ 20965747 (+)
G236387 NA non-coding upstream 216504 20899018 ~ 20941457 (+)
G236446 NA non-coding downstream 28049 21193603 ~ 21247124 (+)
G236448 NA non-coding downstream 31871 21197425 ~ 21223693 (+)
G236441 NA non-coding downstream 81010 21246564 ~ 21345168 (+)
G236455 NA non-coding downstream 130623 21296177 ~ 21330483 (+)
G236492 NA non-coding downstream 207567 21373121 ~ 21373379 (+)
LOC120554011 cd59,LOC102793758,LOC101486506,LOC100705993,LOC104934006,LOC103366567 other upstream 80165 20976072 ~ 21077796 (+)
zdbf2 NA other upstream 193376 20956949 ~ 20964585 (+)
G236394 NA other upstream 241184 20912655 ~ 20916777 (+)
cavin2b NA other upstream 270592 20845648 ~ 20887369 (+)
fmnl2b LOC101465085,LOC102790854,LOC102292591,LOC106517599,LOC100693318 other upstream 316183 20769476 ~ 20841778 (+)
G236467 NA other downstream 136772 21302326 ~ 21361235 (+)
G236461 LOC102792843 other downstream 242373 21407927 ~ 21422915 (+)
G236459 LOC103360213,LOC106936810,LOC103477369,LOC103473932,LOC106933094,LOC107835021,LOC108249964,LOC107380983,LOC108250351,LOC108242155,LOC108250349,LOC108229490 other downstream 258731 21424285 ~ 21634001 (+)
G236530 NA other downstream 456944 21622498 ~ 21623439 (+)
G236466 NA other downstream 460384 21625938 ~ 21633849 (+)

Expression


Co-expression Network