LOC120554020 (LOC103368590)


Basic Information

Item Value
gene id LOC120554020
gene name LOC103368590
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 2100152 ~ 2107127 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792592.1
TGACACTCTGGGCCCCTCCCCAGTAGGCCAGTTAAGTAATCCCCCCATGAGTGGGTGGGCTCTCTGTCAGCTACAGGTGACCCTTCACAGACTCAAGGTGTTCATGTCAGAGTCAAGGGTCCCCTTTTTCATTTCTGGAGCAGGTCACGTCCTTCCTGGGTCTGGGATGACAACAAAAATCATTCACTTCTTGGTTAATGGGAGGCCGGAGCAAGCAGAGTTTGGAGCCGACTGCTCTGCTGCAGATGTCAAAGATCTGTTCCGGGCGGCTGCGGAGGCAGGGCCTCACCACATCCTGAAGTTGTACAACACAAACGGCGGCGTGGTGAAcatctcccccctgctggaagccAACAGCGAGGACTCGTACTACCGACTGGAGGTGGTGGCGTCAAATCTAAAGAGTGTGGGGATGCCAAAAGAGCTGGACACCATGGAATACAGGCTGCATTATCTGGAGAGCAAAGTCAATGAAGACTTGGGGAAGACTCCGACTATCATCTCTGATCTGAAGAGCCAAGTGGAGTCTTTTAAGAGGAAGCTGGAGAGTGTGGAGCACCTGAGCTGGATGGGTCTATTTAAGGAGGACAGCGACCAACAGCTCTCCAAGTTGTCCCCAAAACCCCAAACCTCTCAGCTAAGCATGCATGAGGAGCGCCAACAAGTCCGCAGGGAGTTCCTCAACATGAGCACGCTGCAGGTGACAGAAGAAGTGAGAGAGCATCTGAAAACTCCCATTTTTGACAACTGGCAGTGGGAGGATGCGGAGATGCTGGTGCTCCTCCAGGTGATGTTCACCGACCTGGAGTTCCTGACGGCGTTTCACATCGAGCTGGACGTCCTGCAGAACTTCCTGTTTAAGGTCTACTGCCACTACAACAGCATCCCCTTCCACAACTTCAGGCACTGCTTCTGCGTCACTCAGATGATGTACGGGCTCATCTGGCTGACAGACCTCCAGAGTAAAATAGCAAGAATCGACCTGTTGATCATGTTGACCTCGGCTCTGTGCCACGACCTCGACCACCCCGGCTACAACAACGTCTACCAGATCAATGCTCAGACCGACTTAGCTCTTCGCTACAACGACATTTCCCCCCTGGAAAACCACCACTGTGCCGTCGCCTTCGGCATCATGTCCAAGCAAGAGTGCAACATCCTAAAAAACCTGACCTGCGAGCAGTACAAATACATCCGAGGAGGAATGATTAAaTGTATTCTGGCCACCGACATGGCGAGACACAACGAAATTCTCAACAAGTTCAAAACAATGCGGCCGGTGTTCAACTTCACGAACAAGGAGCACAAGGAAGTGCTGATGAACATCATGGTGAAGGTGAGTGACATCTCCAACGAGGCGAGGCCGATGGCCGTGGCCGAGCCCTGGCTGGACTGTCTGCTGCAGGAGTTCTTCAACCAGAGCGACACAGAGAAACTCAAAGGGCTCCCAGTGACTCCTTTCATGGACCGAGACAAAGTGTCCAAACCGTCCTCTCAGACCAACTTCATCCGATTTGTCCTCCTGCCGCTCTTCAGTGAGCTCACCAAGCTGTTCCCCTGTCTGGAGCAACATATTCTGGAGCCGGTGCGACGGGCCCTGGAGTATTACTCTGACCTGGAGAGAGCCAGCAAGGAGGAGGAGCGGACGACCAaagcatgaggaggaggaagaggaggaggagattcAATACTAGCAGTGTTAGAGGACGTTATGAATCATTTGAAATTTTATAGAGGAATGTCAGAGTTTTATAATTAGTCAAATTCTCCTGAATATCTTCTGTACATGTTATATTTTTGGAGTAGTTGGGAATATGATATTTTTAGATGAGGTTTCTGACAGTGATGAGAGGTAAAGATgtgatgttttctttgtttctcaTTTGACATGTTGTATTTTAACTCTTAAAACATTAACATATTCAAGACACCTTGAAATTAAACttaattattacttttactttataaaaggtttgtttttgct
>XM_039792593.1
TGACACTCTGGGCCCCTCCCCAGTAGGCCAGTTAAGTAATCCCCCCATGAGTGGGTGGGCTCTCTGTCAGCTACAGGTGACCCTTCACAGACTCAAGGTGTTCATGTCAGAGTCAAGGGTCCCCTTTTTCATTTCTGGAGCAGGTCACGTCCTTCCTGGGTCTGGGATGACAACAAAAATCATTCACTTCTTGGTTAATGGGAGGCCGGAGCAAGCAGAGTTTGGAGCCGACTGCTCTGCTGCAGATGTCAAAGATCTGTTCCGGGCGGCTGCGGAGGCAGGGCCTCACCACATCCTGAAGTTGTACAACACAAACGGCGGCGTGGTGAAcatctcccccctgctggaagccAACAGCGAGGACTCGTACTACCGACTGGAGGTGGTGGCGTCAAATCTAAAGAGTGTGGGGATGCCAAAAGAGCTGGACACCATGGAATACAGGCTGCATTATCTGGAGAGCAAAGTCAATGAAGACTTGGGGAAGACTCCGACTATCATCTCTGATCTGAAGAGCCAAGTGGAGTCTTTTAAGAGGAAGCTGGAGAGTGTGGAGCACCTGAGCTGGATGGGTCTATTTAAGGAGGACAGCGACCAACAGCTCTCCAAGTTGTCCCCAAAACCCCAAACCTCTCAGCTAAGCATGCATGAGGAGCGCCAACAAGTCCGCAGGGAGTTCCTCAACATGAGCACGCTGCAGGTGACAGAAGAAGTGAGAGAGCATCTGAAAACTCCCATTTTTGACAACTGGCAGTGGGAGGATGCGGAGATGCTGGTGCTCCTCCAGGTGATGTTCACCGACCTGGAGTTCCTGACGGCGTTTCACATCGAGCTGGACGTCCTGCAGAACTTCCTGTTTAAGGTCTACTGCCACTACAACAGCATCCCCTTCCACAACTTCAGGCACTGCTTCTGCGTCACTCAGATGATGTACGGGCTCATCTGGCTGACAGACCTCCAGAGTAAAATAGCAAGAATCGACCTGTTGATCATGTTGACCTCGGCTCTGTGCCACGACCTCGACCACCCCGGCTACAACAACGTCTACCAGGTCACCTCACTGCCAGTCTCTTCGTCTCACCATCAAAGGCAAGAGTGCAACATCCTAAAAAACCTGACCTGCGAGCAGTACAAATACATCCGAGGAGGAATGATTAAaTGTATTCTGGCCACCGACATGGCGAGACACAACGAAATTCTCAACAAGTTCAAAACAATGCGGCCGGTGTTCAACTTCACGAACAAGGAGCACAAGGAAGTGCTGATGAACATCATGGTGAAGGTGAGTGACATCTCCAACGAGGCGAGGCCGATGGCCGTGGCCGAGCCCTGGCTGGACTGTCTGCTGCAGGAGTTCTTCAACCAGAGCGACACAGAGAAACTCAAAGGGCTCCCAGTGACTCCTTTCATGGACCGAGACAAAGTGTCCAAACCGTCCTCTCAGACCAACTTCATCCGATTTGTCCTCCTGCCGCTCTTCAGTGAGCTCACCAAGCTGTTCCCCTGTCTGGAGCAACATATTCTGGAGCCGGTGCGACGGGCCCTGGAGTATTACTCTGACCTGGAGAGAGCCAGCAAGGAGGAGGAGCGGACGACCAaagcatgaggaggaggaagaggaggaggagattcAATACTAGCAGTGTTAGAGGACGTTATGAATCATTTGAAATTTTATAGAGGAATGTCAGAGTTTTATAATTAGTCAAATTCTCCTGAATATCTTCTGTACATGTTATATTTTTGGAGTAGTTGGGAATATGATATTTTTAGATGAGGTTTCTGACAGTGATGAGAGGTAAAGATgtgatgttttctttgtttctcaTTTGACATGTTGTATTTTAACTCTTAAAACATTAACATATTCAAGACACCTTGAAATTAAACttaattattacttttactttataaaaggtttgtttttgct

Function

NR:

description
PREDICTED: high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like

GO: NA

KEGG:

id description
K13761 PDE9; high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792592.1 True 1984 mRNA 0.49 14 2100152 2107127
XM_039792593.1 False 1930 mRNA 0.49 13 2100152 2107127

Neighbor

gene id symbol gene type direction distance location
LOC120554798 NA coding upstream 4753 2095271 ~ 2095399 (+)
LOC120554025 NA coding upstream 68397 1964757 ~ 2031755 (+)
LOC120554615 inhbb,LOC104931304,LOC101477046 coding upstream 260911 1828526 ~ 1839241 (+)
LOC120554028 NA coding upstream 289450 1809145 ~ 1810702 (+)
mlpha LOC107384560 coding upstream 318725 1749278 ~ 1781427 (+)
LOC120554727 gp91phox,LOC107384631,LOC103389690,LOC100705711,LOC103372494 coding downstream 138584 2245711 ~ 2258027 (+)
bin1b bin1,LOC100703344,LOC102312482,LOC101065659,LOC103154120,LOC105916432,LOC107384639,LOC102793948,LOC103389239,LOC108251630 coding downstream 221384 2328511 ~ 2349442 (+)
LOC120554740 si:ch211-114n24.6,LOC107581392,LOC107659977,LOC107659949,LOC108436424,LOC103034569,LOC102213574 coding downstream 243417 2350544 ~ 2352359 (+)
LOC120554738 si:ch211-114n24.6,LOC108255233,LOC101061790,LOC102793273,LOC102213860 coding downstream 246521 2353648 ~ 2356348 (+)
desmb des,LOC103366968,LOC101472777 coding downstream 300768 2407895 ~ 2417552 (+)
G231512 NA non-coding upstream 29310 2069157 ~ 2070842 (+)
G231495 NA non-coding upstream 188089 1856072 ~ 1912063 (+)
G231494 NA non-coding upstream 248306 1851176 ~ 1851846 (+)
G231463 NA non-coding upstream 327913 1716700 ~ 1772239 (+)
G231555 NA non-coding downstream 88913 2196040 ~ 2196378 (+)
G231564 NA non-coding downstream 107526 2214653 ~ 2216612 (+)
G231573 NA non-coding downstream 162926 2270053 ~ 2286959 (+)
G231574 NA non-coding downstream 174092 2281219 ~ 2282893 (+)
G231910 NA non-coding downstream 255766 2362893 ~ 2406781 (+)
G231514 LOC101480717,LOC102290810,LOC102794459 other upstream 1403 2096875 ~ 2098749 (+)
G231461 LOC107384560,LOC103366582 other upstream 308294 1716411 ~ 1791858 (+)
G231423 agap1,LOC101478076,LOC102798364,LOC103389825 other upstream 386750 1399732 ~ 1713402 (+)
LOC120554068 agap1,LOC101478076 other upstream 579088 1468168 ~ 1521064 (+)
G231428 NA other upstream 603545 1487274 ~ 1496607 (+)
sumo1 sumo1 other downstream 382008 2489135 ~ 2494174 (+)
G232031 NA other downstream 792686 2899813 ~ 2906486 (+)
LOC120554435 NA other downstream 1446451 3553578 ~ 3590879 (+)
dock9b LOC103359855 other downstream 2233367 4340494 ~ 4399319 (+)
G232425 NA other downstream 2310037 4417164 ~ 4418102 (+)

Expression


Co-expression Network