LOC120554053 (mpp4)


Basic Information

Item Value
gene id LOC120554053
gene name mpp4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 18177570 ~ 18186577 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792650.1
TCCAAAGACAAATCGGAGAGGTCCGTCCGGTGTGGGCGTGAATAAACTTCGGAGGCGCTTGATTGAAATGAACCCCAACATCTTCCAGGGCGCTGTACCTCACACCACAAGAGCACCAAAGGGATACGAGGAGTCTGGTAGAGAATATCACTTCACCAGCCGAGAAATCTTTGACAACATGGCGTATAACAACAGGTTTTTGGAGTACGGGGAGTACAAAGGGAATCTGTACGGCACGAGCATTGCGTCTGTGAGGGAAGTTTTAAACAGCGGGAAGATCTGCGTCATCGACATCGAGCCCAATTCCATCCAGGCGGTGCGGAGCCACGAGCTGCGGGCCTACATCATCTACGTGAAGCCCCCGCCGCCGGAGCGACTCAAGGAGACCCGACGGGACTCATACATCACCACCAACTACTACGTCAACCGGCCGTTCAAAGATGAAGACTTCCAGGAGATGGAAGAAGCCGCCCAGAAAATGGAGTCCGACTTAAGTCAGTTCTTTGACCATGTGATCGTCAATGACGAGCTGCAGGACTCCTGCGTCCAGCTGCTGGCGGCGGCGAGGAAGGCGCAGGACGAGCCGCAGTGGGTCCCTGCCAGCTGGATACGACCCACCACCGAGTCCTAAGGCCACAAAGAATGTGACCCCCCTGTTACCATGGCAGCAgttactttttcatttttattcaacAGATTCCTCACTGTAAAATCTTAACATGTAAATCAATGTTCATGTTCCAGGGGAGAAGGGCATGAAATATAATTATTTTGATCTTCTTCTTACTTGTGTGCTTGATCtgcagcggtggaatgtaactgagtacatttactccagtactgtacttgagtccaaatgttgaggtacttgtacttttactagagtc

Function

symbol description
mpp4 Predicted to enable signaling receptor binding activity. Predicted to act upstream of or within protein localization to synapse. Located in actin cytoskeleton; adherens junction; and cytosol. Part of protein-containing complex.

NR:

description
MAGUK p55 subfamily member 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792650.1 True 887 mRNA 0.50 6 18177570 18186577

Neighbor

gene id symbol gene type direction distance location
LOC120554723 NA coding downstream 862 18159816 ~ 18176708 (-)
LOC120554721 LOC104966233,LOC100698939 coding downstream 19270 18143977 ~ 18158300 (-)
abi2b abi2 coding downstream 34117 18113995 ~ 18143453 (-)
LOC120554632 LOC103360035,LOC103370267 coding downstream 75539 18029836 ~ 18102031 (-)
LOC120554265 NA coding downstream 204393 17971201 ~ 17973177 (-)
LOC120554369 LOC104960229 coding upstream 76259 18262836 ~ 18269669 (-)
LOC120554384 NA coding upstream 141931 18328508 ~ 18340419 (-)
LOC120554329 LOC100698054,LOC102783597 coding upstream 156136 18342713 ~ 18353343 (-)
LOC120554003 LOC103370269 coding upstream 170527 18357104 ~ 18402213 (-)
acvr2ab acvr2a,LOC102784913,LOC103371821 coding upstream 279371 18465948 ~ 18523016 (-)
G235793 NA non-coding downstream 63613 18062294 ~ 18113957 (-)
G235743 NA non-coding downstream 191392 17985922 ~ 17986178 (-)
G235725 NA non-coding downstream 234073 17943210 ~ 17943497 (-)
G235724 NA non-coding downstream 237243 17934775 ~ 17940327 (-)
G235723 NA non-coding downstream 246585 17930532 ~ 17930985 (-)
G235816 NA non-coding upstream 23926 18210503 ~ 18214168 (-)
G235844 NA non-coding upstream 66247 18252824 ~ 18300953 (-)
LOC120554613 NA non-coding upstream 70366 18256943 ~ 18257506 (-)
G235908 NA non-coding upstream 346870 18533447 ~ 18534684 (-)
G235929 NA non-coding upstream 410422 18596999 ~ 18597208 (-)
s100b LOC103360204,LOC104927403 other downstream 432313 17734731 ~ 17745257 (-)
G235350 NA other downstream 1074053 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 1421505 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 1435282 16736186 ~ 16742288 (-)
G235387 NA other downstream 1561254 16611983 ~ 16616316 (-)
LOC120554370 LOC103370263 other upstream 84501 18271078 ~ 18327103 (-)
LOC120554371 mbd5,LOC102784158 other upstream 217649 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 1336927 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 1544742 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 2180764 20367341 ~ 20368433 (-)

Expression


Co-expression Network