slc19a2 (slc19a2)


Basic Information

Item Value
gene id slc19a2
gene name slc19a2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 14356830 ~ 14399370 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792667.1
AGAAGCAGTATGTAAGAAGTATAATAACAAAGATTCTCTATACTGTAATAAGTAGCAGTTAGTTGTGGAGCCGAGGCAATGCTGGTGAGTCCAACATGTCTGTGCTCAGCCCAACTGTTCTGCTCTGTGTGTATGGCTTCTTTTCCAATCTCCGGCCGTCGGAGCCTTTCCTCACCGCCTACCTCATGGGACCAGACAAGAACCTGACAGAGACTCAGGTCGTCAATGAAATCTATCCAATTTGGACGTATTCCTACCTGGTGTTGCTGTTCCCCATCTTCCTAGCCACTGACTACCTCTGTTATAAGCCTGTATTGGTCCTGCAGGCCATAAGCTTAGTAGTTACCTATGTTATGTTGCTAAAGACACAGGGCATGCTGACAATGCAACTCCTGGAATGTTTCTTTGGGCTGGCCACGGCCTCGGAGGTGGCCTACTACTCCTACATCTACAGCATCGTGGAGCCGGCACACTACCAGAGAGTGACGGGTTACTGCCGCAGCATCGCTCTGTTTGGATCAGCTGCTggatctctgattggtcagctccTGCTCTCTGTGGCCAGAGTTCAGCTGGTCCACCTTGTCATCATCACTCTGACGTCAGCCGCTGTGGCCTGTGTTGCTCCCTGGTTTCTACCCATGCCCAAGAGGAGCTTGTTCTTCCACAAGAGTCCAGGACCAGCAGAGGAAAAGCCAGGCAGCAGCACAGCACTGTTGGAAAAGGCTGGGGATTCAGAGAGTGAATTGCCTCTAAACAGCCAGGATGTCTACACAATGTCCAGGTCCTTTAACACAGGAAGCCATAACAGTGGTCTTGTGGAGGTGTTACGGATACTGTTTGATGACTTCCTGCAGTGCTACAGGTATCAGCCCCTGCTTGCATGGTCGCTGTGGTGGGCACTGGCCACGTGCGGCTACTTCCAGGTCATCAACTACGCTCAAGCATTATGGGAGAACGTTCGTCCATCCCAGGACTATGAAATCTACAATGGCTACGtagagacactgtccacagtgCTAGGGGCTCTGGCAGCTCTGCTGGTGGGCTACCTGCCTGTATGCTGGGCTCTGTGGGGTGAGCTGGCTCTGTGTGCCCTCTCCCTGctgatggctgtgtgtgtgtttgtcatggACACACTGAGGAACATCTGGCTATGTTACAGCTCATACGTCCTCTTCAGAGCCACATACATGTTGCTCATTACTGTGGCTACATATCAGATTGCAGCTAGTCTCAATATGCATCGCTATGCCTTGGTGTTTGGAGTAAACACCTTTGTGGCTCTGCTGCTGCAGTCTCTCCTcactgtggtggtggtggactCAGCTGGCCTCGGGCTCAACATTTTCACTCAGTACCTCATCTATGGCGGTTACTTTGCTGTAATTTCAATGGTCTTTCTCCTTGCTGGGCTTTGCAAATTGGCCTACAGGAGACGCTCCAAACAAGAGGAGGAGGGCCTGGCCAACAGCCAAGCTTAAAGAGTCAGACTCTCCTCCAATCAGATGcaaataggacatacattatATTGATAGATCTTGTTTAGCTTCTCACATACTAAGCACCATAGGTGAGCTTCTCTAATCTCTTTAACCGCATAGTTGTTTTCATTGTATTGTTCTGTATAATGACTGCAGGCTACTCTCTGTGGCTTTGCCTACActtattaaaacattatttgtcACATATTTGTCCATTGCCCAGCTTATTGAATTGGTGCAATAGACTTGATGTGAAAAAATTTTTTGCAAAAATTTGTGTATGTTTTCACATATGTTTTCACATGAGaaatattgattgattgactgattgatttaaaagctaaataaaaactaacaaTGGTACCTTAATAGTACTActacttacagtacaggccaaaagtttggacacacctcctcattcaatgtgtttcct
>XM_039792668.1
AGAAGCAGTATGTAAGAAGTATAATAACAAAGATTCTCTATACTGTAATAAGTAGCAGTTAGTTGTGGAGCCGAGGCAATGCTGGTGAGTCCAACATGTCTGTGCTCAGCCCAACTGTTCTGCTCTGTGTGTATGGCTTCTTTTCCAATCTCCGGCCGTCGGAGCCTTTCCTCACCGCCTACCTCATGGGACCAGACAAGAACCTGACAGAGACTCAGGTCGTCAATGAAATCTATCCAATTTGGACGTATTCCTACCTGGTGTTGCTGTTCCCCATCTTCCTAGCCACTGACTACCTCTGTTATAAGCCTGTATTGGTCCTGCAGGCCATAAGCTTAGTAGTTACCTATGTTATGTTGCTAAAGACACAGGGCATGCTGACAATGCAACTCCTGGAATGTTTCTTTGGGCTGGCCACGGCCTCGGAGGTGGCCTACTACTCCTACATCTACAGCATCGTGGAGCCGGCACACTACCAGAGAGTGACGGGTTACTGCCGCAGCATCGCTCTGTTTGGATCAGCTGCTggatctctgattggtcagctccTGCTCTCTGTGGCCAGAGTTCAGCTGGTCCACCTTGTCATCATCACTCTGACGTCAGCCGCTGTGGCCTGTGTTGCTCCCTGGTTTCTACCCATGCCCAAGAGGAGCTTGTTCTTCCACAAGAGTCCAGGACCAGCAGAGGAAAAGCCAGGCAGCAGCACAGCACTGTTGGAAAAGGCTGGGGATTCAGAGAGTGAATTGCCTCTAAACAGCCAGGATGTCTACACAATGTCCAGGTCCTTTAACACAGGAAGCCATAACAGTGGTCTTGTGGAGGTGTTACGGATACTGTTTGATGACTTCCTGCAGTGCTACAGGTATCAGCCCCTGCTTGCATGGTCGCTGTGGTGGGCACTGGCCACGTGCGGCTACTTCCAGGTCATCAACTACGCTCAAGCATTATGGGAGAACGTTCGTCCATCCCAGGACTATGAAATCTACAATGGCTACGtagagacactgtccacagtgCTAGGGGCTCTGGCAGCTCTGCTGGTGGGCTACCTGCCTGTATGCTGGGCTCTGTGGGGTGAGCTGGCTCTGTGTGCCCTCTCCCTGctgatggctgtgtgtgtgtttgtcatggACACACTGAGGAACATCTGGCTATGTTACAGCTCATACGTCCTCTTCAGAGCCACATACATGTTGCTCATTACTGTGGCTACATATCAGATTGCAGCTAGTCTCAATATGCATCGCTATGCCTTGGTGTTTGGAGTAAACACCTTTGTGGCTCTGCTGCTGCAGTCTCTCCTcactgtggtggtggtggactCAGCTGGCCTCGGGCTCAACATTTTCACTCAGTACCTCATCTATGGCGGTTACTTTGCTGTAATTTCAATGGTCTTTCTCCTTGCTGGGCTTTGCAAATTGGCCTACAGGAGACGCTCCAATCAGATGcaaataggacatacattatATTGATAGATCTTGTTTAGCTTCTCACATACTAAGCACCATAGGTGAGCTTCTCTAATCTCTTTAACCGCATAGTTGTTTTCATTGTATTGTTCTGTATAATGACTGCAGGCTACTCTCTGTGGCTTTGCCTACActtattaaaacattatttgtcACATATTTGTCCATTGCCCAGCTTATTGAATTGGTGCAATAGACTTGATGTGAAAAAATTTTTTGCAAAAATTTGTGTATGTTTTCACATATGTTTTCACATGAGaaatattgattgattgactgattgatttaaaagctaaataaaaactaacaaTGGTACCTTAATAGTACTActacttacagtacaggccaaaagtttggacacacctcctcattcaatgtgtttcct
>XM_039792669.1
agtcagcacctaaaacgtaaacatgttggagtccatgatgaggaggaagagttCAACAGCACGGTGGAGTCACTACACAATCTTACTTCTGTTCAGTTCTGAAGTCGTCAATGAAATCTATCCAATTTGGACGTATTCCTACCTGGTGTTGCTGTTCCCCATCTTCCTAGCCACTGACTACCTCTGTTATAAGCCTGTATTGGTCCTGCAGGCCATAAGCTTAGTAGTTACCTATGTTATGTTGCTAAAGACACAGGGCATGCTGACAATGCAACTCCTGGAATGTTTCTTTGGGCTGGCCACGGCCTCGGAGGTGGCCTACTACTCCTACATCTACAGCATCGTGGAGCCGGCACACTACCAGAGAGTGACGGGTTACTGCCGCAGCATCGCTCTGTTTGGATCAGCTGCTggatctctgattggtcagctccTGCTCTCTGTGGCCAGAGTTCAGCTGGTCCACCTTGTCATCATCACTCTGACGTCAGCCGCTGTGGCCTGTGTTGCTCCCTGGTTTCTACCCATGCCCAAGAGGAGCTTGTTCTTCCACAAGAGTCCAGGACCAGCAGAGGAAAAGCCAGGCAGCAGCACAGCACTGTTGGAAAAGGCTGGGGATTCAGAGAGTGAATTGCCTCTAAACAGCCAGGATGTCTACACAATGTCCAGGTCCTTTAACACAGGAAGCCATAACAGTGGTCTTGTGGAGGTGTTACGGATACTGTTTGATGACTTCCTGCAGTGCTACAGGTATCAGCCCCTGCTTGCATGGTCGCTGTGGTGGGCACTGGCCACGTGCGGCTACTTCCAGGTCATCAACTACGCTCAAGCATTATGGGAGAACGTTCGTCCATCCCAGGACTATGAAATCTACAATGGCTACGtagagacactgtccacagtgCTAGGGGCTCTGGCAGCTCTGCTGGTGGGCTACCTGCCTGTATGCTGGGCTCTGTGGGGTGAGCTGGCTCTGTGTGCCCTCTCCCTGctgatggctgtgtgtgtgtttgtcatggACACACTGAGGAACATCTGGCTATGTTACAGCTCATACGTCCTCTTCAGAGCCACATACATGTTGCTCATTACTGTGGCTACATATCAGATTGCAGCTAGTCTCAATATGCATCGCTATGCCTTGGTGTTTGGAGTAAACACCTTTGTGGCTCTGCTGCTGCAGTCTCTCCTcactgtggtggtggtggactCAGCTGGCCTCGGGCTCAACATTTTCACTCAGTACCTCATCTATGGCGGTTACTTTGCTGTAATTTCAATGGTCTTTCTCCTTGCTGGGCTTTGCAAATTGGCCTACAGGAGACGCTCCAAACAAGAGGAGGAGGGCCTGGCCAACAGCCAAGCTTAAAGAGTCAGACTCTCCTCCAATCAGATGcaaataggacatacattatATTGATAGATCTTGTTTAGCTTCTCACATACTAAGCACCATAGGTGAGCTTCTCTAATCTCTTTAACCGCATAGTTGTTTTCATTGTATTGTTCTGTATAATGACTGCAGGCTACTCTCTGTGGCTTTGCCTACActtattaaaacattatttgtcACATATTTGTCCATTGCCCAGCTTATTGAATTGGTGCAATAGACTTGATGTGAAAAAATTTTTTGCAAAAATTTGTGTATGTTTTCACATATGTTTTCACATGAGaaatattgattgattgactgattgatttaaaagctaaataaaaactaacaaTGGTACCTTAATAGTACTActacttacagtacaggccaaaagtttggacacacctcctcattcaatgtgtttcct
>XM_039792670.1
TAAATCTGTGTTGTATCAGTGTCTCAAATTTGTGACTTGTGAAACttgtaaaacacatttcacaagtGAATGCAGAGCGATTTGTATCCGCAAACACAATTCACAATGAATGCAGAGCGATTTGTATCCGCAAATGCGTGTCTGTGTCCGTGCGTCTAATTTATAACTCGTGTTTCATCATTTGTGAATGAACttagtatttttcaatgtaaatatgTGTAAATCTCCTATTTGTGGGTACTTTCGATCCCAGTGCTCTCCAGTAGATGGCGGTAATGCAACACTTATGGATGCCAATTGCTGTTAAACTACATGTTTCAGAGACTGTTGGCAGAATCTACTCTAATTCTGCTTACTCCGGATCTGACTGATCAGATGCTGTCCTAAACACCTGTTTGATGAGGTTTATCTGGACCCACAAGACTCCTCACAGTATAAAGGTCGTCAATGAAATCTATCCAATTTGGACGTATTCCTACCTGGTGTTGCTGTTCCCCATCTTCCTAGCCACTGACTACCTCTGTTATAAGCCTGTATTGGTCCTGCAGGCCATAAGCTTAGTAGTTACCTATGTTATGTTGCTAAAGACACAGGGCATGCTGACAATGCAACTCCTGGAATGTTTCTTTGGGCTGGCCACGGCCTCGGAGGTGGCCTACTACTCCTACATCTACAGCATCGTGGAGCCGGCACACTACCAGAGAGTGACGGGTTACTGCCGCAGCATCGCTCTGTTTGGATCAGCTGCTggatctctgattggtcagctccTGCTCTCTGTGGCCAGAGTTCAGCTGGTCCACCTTGTCATCATCACTCTGACGTCAGCCGCTGTGGCCTGTGTTGCTCCCTGGTTTCTACCCATGCCCAAGAGGAGCTTGTTCTTCCACAAGAGTCCAGGACCAGCAGAGGAAAAGCCAGGCAGCAGCACAGCACTGTTGGAAAAGGCTGGGGATTCAGAGAGTGAATTGCCTCTAAACAGCCAGGATGTCTACACAATGTCCAGGTCCTTTAACACAGGAAGCCATAACAGTGGTCTTGTGGAGGTGTTACGGATACTGTTTGATGACTTCCTGCAGTGCTACAGGTATCAGCCCCTGCTTGCATGGTCGCTGTGGTGGGCACTGGCCACGTGCGGCTACTTCCAGGTCATCAACTACGCTCAAGCATTATGGGAGAACGTTCGTCCATCCCAGGACTATGAAATCTACAATGGCTACGtagagacactgtccacagtgCTAGGGGCTCTGGCAGCTCTGCTGGTGGGCTACCTGCCTGTATGCTGGGCTCTGTGGGGTGAGCTGGCTCTGTGTGCCCTCTCCCTGctgatggctgtgtgtgtgtttgtcatggACACACTGAGGAACATCTGGCTATGTTACAGCTCATACGTCCTCTTCAGAGCCACATACATGTTGCTCATTACTGTGGCTACATATCAGATTGCAGCTAGTCTCAATATGCATCGCTATGCCTTGGTGTTTGGAGTAAACACCTTTGTGGCTCTGCTGCTGCAGTCTCTCCTcactgtggtggtggtggactCAGCTGGCCTCGGGCTCAACATTTTCACTCAGTACCTCATCTATGGCGGTTACTTTGCTGTAATTTCAATGGTCTTTCTCCTTGCTGGGCTTTGCAAATTGGCCTACAGGAGACGCTCCAAACAAGAGGAGGAGGGCCTGGCCAACAGCCAAGCTTAAAGAGTCAGACTCTCCTCCAATCAGATGcaaataggacatacattatATTGATAGATCTTGTTTAGCTTCTCACATACTAAGCACCATAGGTGAGCTTCTCTAATCTCTTTAACCGCATAGTTGTTTTCATTGTATTGTTCTGTATAATGACTGCAGGCTACTCTCTGTGGCTTTGCCTACActtattaaaacattatttgtcACATATTTGTCCATTGCCCAGCTTATTGAATTGGTGCAATAGACTTGATGTGAAAAAATTTTTTGCAAAAATTTGTGTATGTTTTCACATATGTTTTCACATGAGaaatattgattgattgactgattgatttaaaagctaaataaaaactaacaaTGGTACCTTAATAGTACTActacttacagtacaggccaaaagtttggacacacctcctcattcaatgtgtttcct
>XM_039792671.1
TTATGGCGGTTATTATAGTTTAATCACTGACTTCACCATGTTTTACAGATCTGACTGATCAGATGCTGTCCTAAACACCTGTTTGATGAGGTTTATCTGGACCCACAAGACTCCTCACAGTATAAAGGTCGTCAATGAAATCTATCCAATTTGGACGTATTCCTACCTGGTGTTGCTGTTCCCCATCTTCCTAGCCACTGACTACCTCTGTTATAAGCCTGTATTGGTCCTGCAGGCCATAAGCTTAGTAGTTACCTATGTTATGTTGCTAAAGACACAGGGCATGCTGACAATGCAACTCCTGGAATGTTTCTTTGGGCTGGCCACGGCCTCGGAGGTGGCCTACTACTCCTACATCTACAGCATCGTGGAGCCGGCACACTACCAGAGAGTGACGGGTTACTGCCGCAGCATCGCTCTGTTTGGATCAGCTGCTggatctctgattggtcagctccTGCTCTCTGTGGCCAGAGTTCAGCTGGTCCACCTTGTCATCATCACTCTGACGTCAGCCGCTGTGGCCTGTGTTGCTCCCTGGTTTCTACCCATGCCCAAGAGGAGCTTGTTCTTCCACAAGAGTCCAGGACCAGCAGAGGAAAAGCCAGGCAGCAGCACAGCACTGTTGGAAAAGGCTGGGGATTCAGAGAGTGAATTGCCTCTAAACAGCCAGGATGTCTACACAATGTCCAGGTCCTTTAACACAGGAAGCCATAACAGTGGTCTTGTGGAGGTGTTACGGATACTGTTTGATGACTTCCTGCAGTGCTACAGGTATCAGCCCCTGCTTGCATGGTCGCTGTGGTGGGCACTGGCCACGTGCGGCTACTTCCAGGTCATCAACTACGCTCAAGCATTATGGGAGAACGTTCGTCCATCCCAGGACTATGAAATCTACAATGGCTACGtagagacactgtccacagtgCTAGGGGCTCTGGCAGCTCTGCTGGTGGGCTACCTGCCTGTATGCTGGGCTCTGTGGGGTGAGCTGGCTCTGTGTGCCCTCTCCCTGctgatggctgtgtgtgtgtttgtcatggACACACTGAGGAACATCTGGCTATGTTACAGCTCATACGTCCTCTTCAGAGCCACATACATGTTGCTCATTACTGTGGCTACATATCAGATTGCAGCTAGTCTCAATATGCATCGCTATGCCTTGGTGTTTGGAGTAAACACCTTTGTGGCTCTGCTGCTGCAGTCTCTCCTcactgtggtggtggtggactCAGCTGGCCTCGGGCTCAACATTTTCACTCAGTACCTCATCTATGGCGGTTACTTTGCTGTAATTTCAATGGTCTTTCTCCTTGCTGGGCTTTGCAAATTGGCCTACAGGAGACGCTCCAAACAAGAGGAGGAGGGCCTGGCCAACAGCCAAGCTTAAAGAGTCAGACTCTCCTCCAATCAGATGcaaataggacatacattatATTGATAGATCTTGTTTAGCTTCTCACATACTAAGCACCATAGGTGAGCTTCTCTAATCTCTTTAACCGCATAGTTGTTTTCATTGTATTGTTCTGTATAATGACTGCAGGCTACTCTCTGTGGCTTTGCCTACActtattaaaacattatttgtcACATATTTGTCCATTGCCCAGCTTATTGAATTGGTGCAATAGACTTGATGTGAAAAAATTTTTTGCAAAAATTTGTGTATGTTTTCACATATGTTTTCACATGAGaaatattgattgattgactgattgatttaaaagctaaataaaaactaacaaTGGTACCTTAATAGTACTActacttacagtacaggccaaaagtttggacacacctcctcattcaatgtgtttcct

Function

symbol description
slc19a2 Predicted to enable thiamine transmembrane transporter activity. Predicted to be involved in thiamine transport and transmembrane transport. Predicted to act upstream of or within vitamin transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in diabetes mellitus; megaloblastic anemia; and thiamine-responsive megaloblastic anemia syndrome. Orthologous to human SLC19A2 (solute carrier family 19 member 2).

NR:

description
PREDICTED: thiamine transporter 1

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016020 membrane cellular_component

KEGG:

id description
K14610 SLC19A2_3, THTR; solute carrier family 19 (thiamine transporter), member 2/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792667.1 False 1917 mRNA 0.47 6 14356830 14399370
XM_039792668.1 False 1860 mRNA 0.47 7 14356830 14399370
XM_039792669.1 False 1802 mRNA 0.47 6 14356830 14392648
XM_039792670.1 True 2139 mRNA 0.46 7 14356830 14391028
XM_039792671.1 False 1826 mRNA 0.47 6 14356830 14390576

Neighbor

gene id symbol gene type direction distance location
LOC120554388 NA coding downstream 57140 14290673 ~ 14299690 (-)
gtf3c3 gtf3c3 coding downstream 269348 14010265 ~ 14087482 (-)
hecw2b hecw2 coding downstream 348407 13797432 ~ 14008423 (-)
LOC120554288 NA coding downstream 375460 13980051 ~ 13981370 (-)
LOC120554566 NA coding downstream 644996 13706250 ~ 13711834 (-)
atg3 atg3 coding upstream 1495 14400865 ~ 14419991 (-)
LOC120554074 ddrgk1 coding upstream 34938 14434308 ~ 14446096 (-)
LOC120554302 ube3a coding upstream 146370 14545740 ~ 14569910 (-)
LOC120554575 NA coding upstream 201785 14601155 ~ 14614899 (-)
chrm4a LOC104937647,LOC103355860,LOC100699420 coding upstream 479188 14878558 ~ 14924344 (-)
G234752 NA non-coding downstream 430 14356095 ~ 14356400 (-)
G234736 NA non-coding downstream 59453 14297080 ~ 14297377 (-)
G234676 NA non-coding downstream 166592 14190031 ~ 14190238 (-)
G234675 NA non-coding downstream 167429 14189095 ~ 14189401 (-)
G234673 NA non-coding downstream 175805 14180705 ~ 14181025 (-)
LOC120554079 NA non-coding upstream 78056 14477426 ~ 14484029 (-)
G234802 NA non-coding upstream 138471 14537841 ~ 14542320 (-)
G234828 NA non-coding upstream 199766 14599136 ~ 14600286 (-)
G234896 LOC103355859,LOC104964875 non-coding upstream 407262 14806632 ~ 14828409 (-)
G234927 NA non-coding upstream 687580 15086950 ~ 15087401 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 66787 14194312 ~ 14290043 (-)
G234405 NA other downstream 1402705 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 2063687 12278519 ~ 12293143 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 2818509 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 2867353 11458937 ~ 11489477 (-)
G234898 NA other upstream 448464 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 566946 14966316 ~ 15013814 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 1849324 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 1926723 16326093 ~ 16352877 (-)
G235387 NA other upstream 2212613 16611983 ~ 16616316 (-)

Expression


Co-expression Network