LOC120554116


Basic Information

Item Value
gene id LOC120554116
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 10948321 ~ 10980875 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792735.1
AATCAGACCCGATGGCGCTCCGTGCAGTCCTACAGTTCCTTTGTGCGTTGGGAGTCTTTCACAAAGGTCTAACCTCTCTGATAGAAACCCAGCAGACTGTGATGGCAGCAGTGGGAGAAGAGGCTCAGTTAAACTGTCAGCTGATGCAATCTAAAGATGTTCTGCAGGTCACATGGCAGAAACGTTTACCTGAGGGGGAGAAGAATCTAGCTACTTACAGCAACAAATTTGGTAAATCAGTGAATCCTGAATTTAGAAACAACGTGGAGTTTAAATATGCTGGACTACAGAACAGCTCCATAGTCATCAGGAAGGTGACGGAGCAGGATGAAGGATGCTATCTCTGTTTGTTTAACATCTACCCTGAAGGTGCTCTCACTGCTACAACCTGCCTCCTTCTCTATGAGCTGCATGAAGCCATTCTCCATGTTGGAGAATCCAACTCTCCTGAAGAGGCAGTAGTGTCCTGCTCGGCCACAGGTCGACCTGCTCCCACAGTTACACTGACTGTCCCTCACCACAACTCTTCCAGTGTCACCAACACCAACGGTACAGTCACTGTCACCACTACAGCTGTGCTGCCTCgtctccatggcaacagcaCACAGGTTGGATGTGCAGTGCGAGTGCTCTCTGGTCCTCAGATAGAGGTGTTCACCATGATTCCTGAGATCAGACAGCCGTCTGCTGATGgttttgatGAGAAATCTAGGTCTGATAACAGTGGTCACAGTCTAACCTCTGTGATAGAAACCCAGCAGACTGTGATGGCAGCAGTGGGAGAAGAGGCTCAGTTAAACTGTCAGCTGATGCAATCTAAAGATGTTCTGCAGGTCACATGGCAGAAACTATTACCTGAGGGGGAGAAGAATCTAGCTACTTACAGCAACAAATTTGGTCAAACAGTGAATCCTGACTTTAGAAACAATGTGGAGTTTAAATGTGCTGGACTACAGAACAGCTCCATAGTCATCAGGAAGGTGATGGAGCAGGATGAAGGATGCTATCTCTGTTTGTTTAACACCTACCCTGAAGGAGCTCTCACTGCTACAACCTGCCTCCTTCTCTATGGTCTAACCTCTCTGATAGAAACCCAGCAGACTGTGATGGCAGCAGTGGGAGAAGAGGCTCAGTTAAACTGTCAGCTGATGCAATCTAAAGAGGTTCTGCAGGTCACATGGCAGAAACTATTACCTGAGGGGGAGAAGAATCTAGCTACTTACAACAAATACTTTGGTCAAAAGGTGAATGCTGGTTTTGAAGAGAAAGTGGAGTTTAAATGTGCTGGACTACAGAACAGCTCCATAGTCATCAGGAAGGTGACGGAGCAGGATGAAGGATGCTATCGCTGTTTGTTTAACACCTACCCTGAAGGAGCTCTCACTGCTACAACCTGCCTCCTTCTCTATGGTCTAACCTCTCTGATAGAAACCCAGCAGACTGTGATGGCAGCAGTGGGAGAAGAGGCTCAGTTAAACTGTCAGCTGATGCAATCTAAAGATGTTCGGCAGGTCACATGGCAGAAACTATTACCTTATGGGGAGAAGAATTTAGCTACTTACAACAAATACTTTGGTCAAAAGGTGAATGCTGGTTTTGAAGAGAAAGTGGAGTTTAAATGTGCTGGACTACAGAACAGCTCCATAGTCATCAGGAAGGTGACGGAGCAGGATGAAGGATGCTATCTCTGTTTGTTTAACACCTACCCTGAAGGAGCTCTCACTGCTACAACCTGCCTCCTACTCTATGAGCTGCATGAAGCCATTCTCCATGTTGGAGAATCCAACTCTCCTGAAGAGGCAGTAGTGTCCTGCTCGGCCACAGGTCGACCTGCTCCCACAGTTACACTGACTGTCCCTCACCACAACTCTTCCAGTGTCACCAACACCAACGGTACAGTCACTGTCACCACTACAGCTGTGCTGCCTTGCCCTCGCAGCACAGCACGAAAGGTTGGATGTGCAGTGCGAGTGCTCTCTGGTCCTCAGATAGAGGTGTTTACCATGATTCCTGAGATCAGACAGCCGTCTGCTGATGgttttgatGAGAAATCTTGGTCTGATAACAGTGATCACAATTTCACTGTGatccttgtgttgtctgtgGTAATGGCCGGTGTTTGTCTTGCTGTAATCATCACCGTCTGCATCTGGCTCATAAGAAAACACTGGAACTGTGTGTCACACAGGGACTCTGAGGAGAACAAGACACCACAGAAACCAACTAAAGATGATCATGAGCCCAAAACACCTTTAATGAGTCAAGAGAATGAGGTACGGCAACGGGGGtctactgggggaaaaaaacattgcatCTACCCTAAAGTACCGTCTCCAAACTTAAGGTGTAAGCTTAAGCTATTTAGTGGTACAGAATAACCCACAAAGCCGAAGTCCCTGAATGAAGACAGTTGGACTTGAACAAAAACTGCCTCAAAGcct
>XM_039792736.1
CATCAGAAGTGCAGGTGACTTTCACTTTTAAAAATGTGGCGGTAAACCCAAAGATGGCACACCGTACAGTCATATATTTCCTTAGTGCGTTGGGAGCGTTTGGAGTCTTTCAGGAAGGTCTAACCTCTCTGATAGAAACCCAGCAGACTGTGATGGCAGCAGTGGGAGAAGAGGCTCAGTTAAACTGTCAGCTGATGCAATCTAAAGATGTTCTGCAGGTCACATGGCAGAAACGTTTACCTGAGGGGGAGAAGAATCTAGCTACTTACAGCAACAAATTTGGTAAATCAGTGAATCCTGAATTTAGAAACAACGTGGAGTTTAAATATGCTGGACTACAGAACAGCTCCATAGTCATCAGGAAGGTGACGGAGCAGGATGAAGGATGCTATCTCTGTTTGTTTAACATCTACCCTGAAGGTGCTCTCACTGCTACAACCTGCCTCCTTCTCTATGGTCTAACCTCTGTGATAGAAACCCAGCAGACTGTGATGGCAGCAGTGGGAGAAGAGGCTCAGTTAAACTGTCAGCTGATGCAATCTAAAGATGTTCTGCAGGTCACATGGCAGAAACTATTACCTGAGGGGGAGAAGAATCTAGCTACTTACAGCAACAAATTTGGTCAAACAGTGAATCCTGACTTTAGAAACAATGTGGAGTTTAAATGTGCTGGACTACAGAACAGCTCCATAGTCATCAGGAAGGTGATGGAGCAGGATGAAGGATGCTATCTCTGTTTGTTTAACACCTACCCTGAAGGAGCTCTCACTGCTACAACCTGCCTCCTTCTCTATGGTCTAACCTCTCTGATAGAAACCCAGCAGACTGTGATGGCAGCAGTGGGAGAAGAGGCTCAGTTAAACTGTCAGCTGATGCAATCTAAAGAGGTTCTGCAGGTCACATGGCAGAAACTATTACCTGAGGGGGAGAAGAATCTAGCTACTTACAACAAATACTTTGGTCAAAAGGTGAATGCTGGTTTTGAAGAGAAAGTGGAGTTTAAATGTGCTGGACTACAGAACAGCTCCATAGTCATCAGGAAGGTGACGGAGCAGGATGAAGGATGCTATCGCTGTTTGTTTAACACCTACCCTGAAGGAGCTCTCACTGCTACAACCTGCCTCCTTCTCTATGGTCTAACCTCTCTGATAGAAACCCAGCAGACTGTGATGGCAGCAGTGGGAGAAGAGGCTCAGTTAAACTGTCAGCTGATGCAATCTAAAGATGTTCGGCAGGTCACATGGCAGAAACTATTACCTTATGGGGAGAAGAATTTAGCTACTTACAACAAATACTTTGGTCAAAAGGTGAATGCTGGTTTTGAAGAGAAAGTGGAGTTTAAATGTGCTGGACTACAGAACAGCTCCATAGTCATCAGGAAGGTGACGGAGCAGGATGAAGGATGCTATCTCTGTTTGTTTAACACCTACCCTGAAGGAGCTCTCACTGCTACAACCTGCCTCCTACTCTATGAGCTGCATGAAGCCATTCTCCATGTTGGAGAATCCAACTCTCCTGAAGAGGCAGTAGTGTCCTGCTCGGCCACAGGTCGACCTGCTCCCACAGTTACACTGACTGTCCCTCACCACAACTCTTCCAGTGTCACCAACACCAACGGTACAGTCACTGTCACCACTACAGCTGTGCTGCCTTGCCCTCGCAGCACAGCACGAAAGGTTGGATGTGCAGTGCGAGTGCTCTCTGGTCCTCAGATAGAGGTGTTTACCATGATTCCTGAGATCAGACAGCCGTCTGCTGATGgttttgatGAGAAATCTTGGTCTGATAACAGTGATCACAATTTCACTGTGatccttgtgttgtctgtgGTAATGGCCGGTGTTTGTCTTGCTGTAATCATCACCGTCTGCATCTGGCTCATAAGAAAACACTGGAACTGTGTGTCACACAGGGACTCTGAGGAGAACAAGACACCACAGAAACCAACTAAAGATGATCATGAGCCCAAAACACCTTTAATGAGTCAAGAGAATGAGGTACGGCAACGGGGGtctactgggggaaaaaaacattgcatCTACCCTAAAGTACCGTCTCCAAACTTAAGGTGTAAGCTTAAGCTATTTAGTGGTACAGAATAACCCACAAAGCCGAAGTCCCTGAATGAAGACAGTTGGACTTGAACAAAAACTGCCTCAAAGcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792735.1 True 2441 mRNA 0.47 12 10948321 10980875
XM_039792736.1 False 2165 mRNA 0.46 10 10948321 10970937

Neighbor

gene id symbol gene type direction distance location
LOC120554115 NA coding downstream 819 10931280 ~ 10947502 (-)
LOC120554111 u2af1,LOC102219527,LOC105917412,LOC103389252,LOC107380862,LOC101158751 coding downstream 48661 10885752 ~ 10899660 (-)
LOC120554104 NA coding downstream 80818 10854723 ~ 10867503 (-)
LOC120554097 LOC100699868,LOC108246800,LOC102211082,LOC101482602,LOC102799187,LOC106525709 coding downstream 162468 10784874 ~ 10785853 (-)
LOC120554100 LOC103371276,LOC104950903,LOC100700136 coding downstream 165793 10780954 ~ 10782528 (-)
LOC120554120 NA coding upstream 9674 10990549 ~ 10995360 (-)
LOC120554123 NA coding upstream 30357 11011232 ~ 11013638 (-)
LOC120554124 NA coding upstream 33120 11013995 ~ 11018662 (-)
LOC120554122 NA coding upstream 39958 11020833 ~ 11029361 (-)
LOC120554129 LOC103361269,LOC104942788,LOC103151927 coding upstream 114641 11095516 ~ 11101153 (-)
G233939 NA non-coding downstream 24505 10915974 ~ 10923816 (-)
LOC120554109 NA non-coding downstream 99966 10837792 ~ 10848355 (-)
G233918 NA non-coding downstream 117191 10829346 ~ 10831130 (-)
LOC120554110 NA non-coding downstream 118061 10824907 ~ 10830260 (-)
G233913 NA non-coding downstream 123465 10818253 ~ 10824856 (-)
G234024 NA non-coding upstream 60311 11041186 ~ 11094182 (-)
G234026 NA non-coding upstream 79936 11060811 ~ 11083168 (-)
G234032 NA non-coding upstream 170967 11151842 ~ 11152551 (-)
G234051 NA non-coding upstream 303917 11284792 ~ 11285090 (-)
G234063 NA non-coding upstream 324736 11305611 ~ 11306703 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other downstream 423236 10464322 ~ 10525085 (-)
LOC120554082 NA other downstream 560388 10383688 ~ 10387933 (-)
G233703 atg13 other downstream 675462 10271069 ~ 10272859 (-)
arhgef7b arhgef7,LOC102205121,LOC101465658,LOC100696931 other downstream 771511 10152861 ~ 10176810 (-)
G233644 NA other downstream 905915 9965692 ~ 10042406 (-)
LOC120554127 NA other upstream 56480 11037355 ~ 11046959 (-)
LOC120554131 NA other upstream 155752 11136627 ~ 11139245 (-)
spega LOC103358966 other upstream 407677 11388552 ~ 11441926 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other upstream 478062 11458937 ~ 11489477 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other upstream 543507 11524382 ~ 11538321 (-)

Expression


Co-expression Network