LOC120554120


Basic Information

Item Value
gene id LOC120554120
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 10990549 ~ 10995360 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792742.1
TGAAGCCGTTCCTTCCTCTAAACCTACCGTGGCAACAACTTGGTCTCTAGTCCCAAAGTATTTTCTTGTGCTCAGTCTCGTATTTTTGGAACCCTGCCtaaacctgctttttttttttcttccctctgtGCCACACTAACTAGCCACGTCCAGCCTCACCTGTCGTGTCTGTTGGTTCACCTGCACTTTTTGGTCAAAaatcttttatgttttttccaACCTCTTCCTGTTCACATGTCTGGCAGTCTGCATTGTGGGTCCAGTTAAAAGCTAATGCTAAACCTAACAGTATAGTATTTAACCCCAACCTTATGTACTGACAGCCCTTTAAAAGCCTGATCAGAGGCTAAACTGAAAGTGTTCTCTGTACAGCAGCAGATAAAGATGTTGCCTCTCCTGATACTGGCTGGTTTGCTGTTTAAAGCCTGCACGTCGCAGATTACTGGTTATGGAAATACAACAGCTGACTATGGCAGCAATGCGTATTACAGCTGCACAGACAGTCCTACAGCAGGTGTGCGCCAGGTTACATGGCAGAGGCTTTTCAAAGATGACTCCATTGAAAATTTGGCAACCTACAGCAAGCGGTTTGGAGAGCAAGTAAATGACCCTTACAGAGGGAAAGTGATCTTCACAGAGGCGTCTCTCAACTCGACGTCAATCACTGTGGCGAATGTTACATGGGGGGATGAAAGCTGTTATATTTGCTCTTTCAACGCGTTTCCCGATGGGTCCAAAAGAAAGCAGACTTGCCTCACGGTGCGAGGGATATCCAGGTTTAAAACAGAAGTGCAAGTTCCCAGCAGTGAACAGGACGAAGAATACGTGAAGGTTGTGTTCAGCTGCACTGCTACAGGCAAACCAGCTCCAACCATTCAGTGGGACTTCTCACCCGGTGCCACCCCGGCACACCAACCACAGACTACTACAGTAACAAACAGTGACCACACttttaacagcagcagcaacatcaCTCTGCAAGTGCCCCCAAACTGGGAAGGAAATGTGGATTGTCTTCTGAACACTGGAGTGACGGGACAGAGGCGGGAGAGGATTCCCTTTTCTTTacagaagcagaagaagaaggaggaggaggaagaggGGAAAGGACCATCTTCATCAGGGATCGCACTTGTAATCATTGCTGTAATGTGTATTTTGGCAATTGCTGTTGCTGTTATAATGAGGCGAAAAAGGTTAAAGGGTAGCAGAAGAGATGAAAATGTTTGATCAGCATTTGGACTTTCACCCAGCTGTCATTTAAGCACGCAAGCATgaaaaacatttgcattttacaGTGAGTCAAGCTGCAATGCAAGATCCACTTTCTGCAGATAGTTTTCAAAACTACCATTTCTCTTGAATTTCAAAACTTAGCACTTTAACATGGTTTATGGAGCAGTTCTGACTTTGTTCTGACTTTGTAGAATGTAAAAATGTTCTGAACAGTGACCAGTGTTTTTCTAGAGCATTACAGAGTATGAAAACTGTGAGGTAAAGAGTTAGTGAGCAGACAAGGTGTCTACATTTGAGGTTAATGATTTATATGCAGAACTTTCAACCTCTTATGAGGGTTACAGTGACTGCAACTTAGTGAAATGGTACAGTCAAGgtggatcttcaacaggggctCCAGGACCCTTAGGGGGGGGTCCTCatagttactgcaggggggccaccaaattattgttaatttttgaaagctttttcaaaaatgaaaacgtcttaacatgaatccaaaatattattagcaaatataaatcaggttattagtaaaaaacaaaaaaacaattattgatATGCTTACTGGCCTGtagtaaggtagtcactaaggtagccatctaCAGATAACAGTTCATCCTAAAGGTTTCACTGTTCTACATGTATgttcaacattaaaacatgattcttGAAATCATGCCAAGTACTATTTTAATAGTTTAGTATTCTATTCACTAAAAAGgtgtgtataaaggctttaggccgccctataCATtgttgtaggcccagtttaatacgCAACTTAATTGTCTTctaatatatgtagtagggggtccctgctccgtctctcttttagTTAAGTGGTCCTTGCCTTAAAATGTTTTAGAGAGCTTTAAAGTAATCCAACGGGCACATCACAGCATAACCAACTGATGGTTGAAGGAAatgtcatctggctccatctagtgtgcattgtgggggaaaaaaaagagcctATATTAATTTTTTACAcagcaaatttatttatttgatgaaaTTATCTATAAAGTTTACAGGTGAAGCAATCAAAATGATTGTATACTGAAATTAACATTTGtatatctatatgtatataGAATTTAAATCAGAGataatatattaaataataGACATAATATATGTGTCTTGGTCATTTTGCACTTTAACGttcattttttgttatttatttctctgtgcacat
>XM_039792743.1
TGAAGCCGTTCCTTCCTCTAAACCTACCGTGGCAACAACTTGGTCTCTAGTCCCAAAGTATTTTCTTGTGCTCAGTCTCGTATTTTTGGAACCCTGCCtaaacctgctttttttttttcttccctctgtGCCACACTAACTAGCCACGTCCAGCCTCACCTGTCGTGTCTGTTGGTTCACCTGCACTTTTTGGTCAAAaatcttttatgttttttccaACCTCTTCCTGTTCACATGTCTGGCAGTCTGCATTGTGGGTCCAGTTAAAAGCTAATGCTAAACCTAACAGTATAGTATTTAACCCCAACCTTATGTACTGACAGCCCTTTAAAAGCCTGATCAGAGGCTAAACTGAAAGTGTTCTCTGTACAGCAGCAGATAAAGATGTTGCCTCTCCTGATACTGGCTGGTTTGCTGTTTAAAGCCTGCACGTCGCAGATTACTGGTTATGGAAATACAACAGCTGACTATGGCAGCAATGCGTATTACAGCTGCACAGACAGTCCTACAGGTGTGCGCCAGGTTACATGGCAGAGGCTTTTCAAAGATGACTCCATTGAAAATTTGGCAACCTACAGCAAGCGGTTTGGAGAGCAAGTAAATGACCCTTACAGAGGGAAAGTGATCTTCACAGAGGCGTCTCTCAACTCGACGTCAATCACTGTGGCGAATGTTACATGGGGGGATGAAAGCTGTTATATTTGCTCTTTCAACGCGTTTCCCGATGGGTCCAAAAGAAAGCAGACTTGCCTCACGGTGCGAGGGATATCCAGGTTTAAAACAGAAGTGCAAGTTCCCAGCAGTGAACAGGACGAAGAATACGTGAAGGTTGTGTTCAGCTGCACTGCTACAGGCAAACCAGCTCCAACCATTCAGTGGGACTTCTCACCCGGTGCCACCCCGGCACACCAACCACAGACTACTACAGTAACAAACAGTGACCACACttttaacagcagcagcaacatcaCTCTGCAAGTGCCCCCAAACTGGGAAGGAAATGTGGATTGTCTTCTGAACACTGGAGTGACGGGACAGAGGCGGGAGAGGATTCCCTTTTCTTTacagaagcagaagaagaaggaggaggaggaagaggGGAAAGGACCATCTTCATCAGGGATCGCACTTGTAATCATTGCTGTAATGTGTATTTTGGCAATTGCTGTTGCTGTTATAATGAGGCGAAAAAGGTTAAAGGGTAGCAGAAGAGATGAAAATGTTTGATCAGCATTTGGACTTTCACCCAGCTGTCATTTAAGCACGCAAGCATgaaaaacatttgcattttacaGTGAGTCAAGCTGCAATGCAAGATCCACTTTCTGCAGATAGTTTTCAAAACTACCATTTCTCTTGAATTTCAAAACTTAGCACTTTAACATGGTTTATGGAGCAGTTCTGACTTTGTTCTGACTTTGTAGAATGTAAAAATGTTCTGAACAGTGACCAGTGTTTTTCTAGAGCATTACAGAGTATGAAAACTGTGAGGTAAAGAGTTAGTGAGCAGACAAGGTGTCTACATTTGAGGTTAATGATTTATATGCAGAACTTTCAACCTCTTATGAGGGTTACAGTGACTGCAACTTAGTGAAATGGTACAGTCAAGgtggatcttcaacaggggctCCAGGACCCTTAGGGGGGGGTCCTCatagttactgcaggggggccaccaaattattgttaatttttgaaagctttttcaaaaatgaaaacgtcttaacatgaatccaaaatattattagcaaatataaatcaggttattagtaaaaaacaaaaaaacaattattgatATGCTTACTGGCCTGtagtaaggtagtcactaaggtagccatctaCAGATAACAGTTCATCCTAAAGGTTTCACTGTTCTACATGTATgttcaacattaaaacatgattcttGAAATCATGCCAAGTACTATTTTAATAGTTTAGTATTCTATTCACTAAAAAGgtgtgtataaaggctttaggccgccctataCATtgttgtaggcccagtttaatacgCAACTTAATTGTCTTctaatatatgtagtagggggtccctgctccgtctctcttttagTTAAGTGGTCCTTGCCTTAAAATGTTTTAGAGAGCTTTAAAGTAATCCAACGGGCACATCACAGCATAACCAACTGATGGTTGAAGGAAatgtcatctggctccatctagtgtgcattgtgggggaaaaaaaagagcctATATTAATTTTTTACAcagcaaatttatttatttgatgaaaTTATCTATAAAGTTTACAGGTGAAGCAATCAAAATGATTGTATACTGAAATTAACATTTGtatatctatatgtatataGAATTTAAATCAGAGataatatattaaataataGACATAATATATGTGTCTTGGTCATTTTGCACTTTAACGttcattttttgttatttatttctctgtgcacat

Function

GO:

id name namespace
GO:0009186 deoxyribonucleoside diphosphate metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792742.1 True 2440 mRNA 0.40 7 10990549 10995360
XM_039792743.1 False 2437 mRNA 0.40 7 10990549 10995360

Neighbor

gene id symbol gene type direction distance location
LOC120554119 NA coding downstream 1500 10967135 ~ 10989049 (-)
LOC120554116 NA coding downstream 9674 10948321 ~ 10980875 (-)
LOC120554115 NA coding downstream 43047 10931280 ~ 10947502 (-)
LOC120554111 u2af1,LOC102219527,LOC105917412,LOC103389252,LOC107380862,LOC101158751 coding downstream 90889 10885752 ~ 10899660 (-)
LOC120554104 NA coding downstream 123046 10854723 ~ 10867503 (-)
LOC120554123 NA coding upstream 15872 11011232 ~ 11013638 (-)
LOC120554124 NA coding upstream 18635 11013995 ~ 11018662 (-)
LOC120554122 NA coding upstream 25473 11020833 ~ 11029361 (-)
LOC120554129 LOC103361269,LOC104942788,LOC103151927 coding upstream 100156 11095516 ~ 11101153 (-)
LOC120554130 NA coding upstream 109007 11104367 ~ 11105832 (-)
LOC120554121 NA non-coding downstream 32259 10957910 ~ 10958290 (-)
G233939 NA non-coding downstream 66733 10915974 ~ 10923816 (-)
LOC120554109 NA non-coding downstream 142194 10837792 ~ 10848355 (-)
G233918 NA non-coding downstream 159419 10829346 ~ 10831130 (-)
LOC120554110 NA non-coding downstream 160289 10824907 ~ 10830260 (-)
G234024 NA non-coding upstream 45826 11041186 ~ 11094182 (-)
G234026 NA non-coding upstream 65451 11060811 ~ 11083168 (-)
G234032 NA non-coding upstream 156482 11151842 ~ 11152551 (-)
G234051 NA non-coding upstream 289432 11284792 ~ 11285090 (-)
G234063 NA non-coding upstream 310251 11305611 ~ 11306703 (-)
G233954 NA other downstream 21439 10948468 ~ 10969110 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other downstream 465464 10464322 ~ 10525085 (-)
LOC120554082 NA other downstream 602616 10383688 ~ 10387933 (-)
G233703 atg13 other downstream 717690 10271069 ~ 10272859 (-)
arhgef7b arhgef7,LOC102205121,LOC101465658,LOC100696931 other downstream 813739 10152861 ~ 10176810 (-)
LOC120554127 NA other upstream 41995 11037355 ~ 11046959 (-)
LOC120554131 NA other upstream 141267 11136627 ~ 11139245 (-)
spega LOC103358966 other upstream 393192 11388552 ~ 11441926 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other upstream 463577 11458937 ~ 11489477 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other upstream 529022 11524382 ~ 11538321 (-)

Expression


Co-expression Network