LOC120554124


Basic Information

Item Value
gene id LOC120554124
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11013995 ~ 11018662 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792746.1
GCATTCTGTGATTATGGATCAATGGAAACTCTGGCTTGTTCATCTTCTCCcactgtgtttctgttttgACAATGAAGTGACTTTTGTGACAACCACAGGGAGGGATCCATATGTGGCTCGGCTATGCACCATTGACTCCTGGCGTAAAGGCACACTTATCCGTTGTAAGATCAGCAGAGAAAGGAGAAGGGGAGATGACTGTTTTGTGGCGTATCCTCCGGGTGGAGAGGACTTGTTTACAATATGTGAATCTAGGTTCACTTTAATGATGGTGAATCAGACTGTATTTCTCCACCTGACCGGGTTAACACCAGCGGACAGTGGGAACTACACCTGTGTGTGTCCATTTCCTGATGGAAAAGATATTCTCCGTCTCAACATCACTGTGGAAGAGCTTAGGTCCAGGATACTGCTCATTACTGTGATTGGTTTTGCATGCATTGTTGTGTCCGTAGTTGCCACTGGACATATCCTGAGAAAAAAACATCGCAGACACAATACGAGGTCAGGAGCACCTGTCTGTGAAACCCCCGTCTCTTTGGACCAAAATGACCCAGATGACCTCGATGACCCCTACACAAGCCTCCAGCAGCCAGCCGATGATCTCTACCAGACCATCTCCTCGGTCCACCGTCAACACGACAACAAGAGGAATTCAGCCAGCAACAGCATAGTGACTGTCCATCTGGGATCAATTTAAAGAGTAATTTAACACTGTGCTGTAAAGCAGCCCTCTGGTTGGATGTTGCAAGATTATTAGGGCATGTTAAGTTACCCTTTCATTTTTTAACACGCATTCATTGTCATAAATCATGTACAGAATCCTCAACGAAGAAGttgagaccttttttttttattctcataATTATTCATACATCTATCACTGTTGTGGATTATAAAATAGTGTTGC
>XM_039792747.1
GCATTCTGTGATTATGGATCAATGGAAACTCTGGCTTGTTCATCTTCTCCcactgtgtttctgttttgACAATGAAGTGACTTTTGTGACAACCACAGGGAGGGATCCATATGTGGCTCGGCTATGCACCATTGACTCCTGGCGTAAAGGCACACTTATCCGTTGTAAGATCAGCAGAGAAAGGAGAAGGGGAGATGACTGTTTTGTGGCGTATCCTCCGGGTGGAGAGGACTTGTTTACAATATGTGAATCTAGGTTCACTTTAATGATGGTGAATCAGACTGTATTTCTCCACCTGACCGGGTTAACACCAGCGGACAGTGGGAACTACACCTGTGTGTGTCCATTTCCTGATGGAAAAGATATTCTCCGTCTCAACATCACTGTGGAAGACACAATACGAGGTCAGGAGCACCTGTCTGTGAAACCCCCGTCTCTTTGGACCAAAATGACCCAGATGACCTCGATGACCCCTACACAAGCCTCCAGCAGCCAGCCGATGATCTCTACCAGACCATCTCCTCGGTCCACCGTCAACACGACAACAAGAGGAATTCAGCCAGCAACAGCATAGTGACTGTCCATCTGGGTAATGAGGAAATAGATGAAAGAGAGACTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792746.1 True 910 mRNA 0.44 6 11013995 11018662
XM_039792747.1 False 621 mRNA 0.48 4 11014355 11018662

Neighbor

gene id symbol gene type direction distance location
LOC120554123 NA coding downstream 357 11011232 ~ 11013638 (-)
LOC120554120 NA coding downstream 18635 10990549 ~ 10995360 (-)
LOC120554119 NA coding downstream 24946 10967135 ~ 10989049 (-)
LOC120554116 NA coding downstream 33120 10948321 ~ 10980875 (-)
LOC120554115 NA coding downstream 66493 10931280 ~ 10947502 (-)
LOC120554122 NA coding upstream 2171 11020833 ~ 11029361 (-)
LOC120554129 LOC103361269,LOC104942788,LOC103151927 coding upstream 76854 11095516 ~ 11101153 (-)
LOC120554130 NA coding upstream 85705 11104367 ~ 11105832 (-)
LOC120554132 prps2 coding upstream 121875 11140537 ~ 11150651 (-)
LOC120554133 NA coding upstream 136264 11154926 ~ 11220986 (-)
LOC120554121 NA non-coding downstream 55705 10957910 ~ 10958290 (-)
G233939 NA non-coding downstream 90179 10915974 ~ 10923816 (-)
LOC120554109 NA non-coding downstream 165640 10837792 ~ 10848355 (-)
G233918 NA non-coding downstream 182865 10829346 ~ 10831130 (-)
LOC120554110 NA non-coding downstream 183735 10824907 ~ 10830260 (-)
G234024 NA non-coding upstream 22524 11041186 ~ 11094182 (-)
G234026 NA non-coding upstream 42149 11060811 ~ 11083168 (-)
G234032 NA non-coding upstream 133180 11151842 ~ 11152551 (-)
G234051 NA non-coding upstream 266130 11284792 ~ 11285090 (-)
G234063 NA non-coding upstream 286949 11305611 ~ 11306703 (-)
G233954 NA other downstream 44885 10948468 ~ 10969110 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other downstream 488910 10464322 ~ 10525085 (-)
LOC120554082 NA other downstream 626062 10383688 ~ 10387933 (-)
G233703 atg13 other downstream 741136 10271069 ~ 10272859 (-)
arhgef7b arhgef7,LOC102205121,LOC101465658,LOC100696931 other downstream 837185 10152861 ~ 10176810 (-)
LOC120554127 NA other upstream 18693 11037355 ~ 11046959 (-)
LOC120554131 NA other upstream 117965 11136627 ~ 11139245 (-)
spega LOC103358966 other upstream 369890 11388552 ~ 11441926 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other upstream 440275 11458937 ~ 11489477 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other upstream 505720 11524382 ~ 11538321 (-)

Expression


Co-expression Network