gemin8 (gemin8)


Basic Information

Item Value
gene id gemin8
gene name gemin8
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11046296 ~ 11049407 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792748.1
CCAGAATTTAATTTGCTGTGGCTCAAAGGCTGCTGGGAAATTTGGCTTTCAGGAAGCAGCATGAGCCACTAAATAAATAAGTTGCCGTTACACCAGAATTAGCAGGTTGGCGGGCGGAATAACGTTAGCGAAGTTGCCAGGAAGATTCACTCAACCTGCATGCGTCTTCAATCATGCAGAAGGACATAAGCTCCGTGATGTCCTGGTTCTCCAGCCCCGTGTACAGCCGCTACTGGCAGCACTACCAGCAGGCTATGGCCTGGCACCAGAGGCACGGGCGAGCCTACCGAAAGGCCTTGGAGGCGGCCTACGGCTACAGCCAGGAGGAGCGGTATCCCAGCAGCCACCAGCAGCGCTACGCTGACTGGAACGCAGGAGAGGAAGACGACGGCGAGGACGGGGACGAGGAGAGCGGCTCGGACAGCGAGATCGAGTGCGACGTCAGCAACATGGAGATCAGCGAGGAGCTTCGGCAGTACTTCGcccagacagagaaacacagagaggagctgaagaagcagcagcagttgGAGGCCGAGCAGCACGAGCGCTACGTGCCGGCCGACCAGGACCTGCGCGGCGCCTCCTGGCGAAGTAGCATGGCCCCTCCCTTGGAGCGACCGGGCGAAAGACGCGGCGCtgagatgaagaagctgtacgGCAGGGACGCCGCCAAGATCCTGGCCATGGAGGCGGCAATGCAGCTCAATTTCGACAGGAACTGTGACCTCAAACAGCCCAAGTACTGGCCTGTTATTCCACTGAAACTGTGACGGCTGCGGGCTGTGAACGCTTTGATTTGGAGGAAATCCCTTCCCTGATCTCTTGGTGAGACAGCAGCTTTGTCGTGTAATGGATTGTGGCTGCTGATGGAGAACTAATGGTGTCGCTTAGCTGAGGGTTACGAGTTATTTtaagcacaaaaaaaagttgcataaATTAGCCGAGCTTCTGCTTCGACAGACGCGAATGTTACTGACCTGTCAGCGGCCCTGCTCTAAATGAAAacgtatgatttttttttttttttttaatgctacaTATAACATTGGATTTCTTTGTTGCTTTACACGTTTACAGAAGTTTATTTTTAACTCCGGATCAAGCAAGCAACACTACCGTTTATCCAAGAGACTGCATGGTTTGTACATGGTCCTTCCAAAGTTGGTTTTGACAGATTTTCTGGACGAAAACTGAGAATCACCAAGAATAAAAGTGAATGTGCCTGCATGTAACCTCctaatgtgtttctgtgtaccCTCTAGCTGGGTGGTGATGCATGCGGCAGGAGCTCCTCTTATGCTTATCAACTTGGTCTAACCACAAAACCATTTCCAACCCCCCCCTTTTCCTCTGTTCAGATTTAGAAGTGCTCCCGCATCACTGCATCTGATATTCCACATTTCAACAAACCCACACGGagagtgattttgtttttgtcgttttctaAACTGTGCCTCTCTGGTTCTGACGTTTCACCGGGTTCAAAGCTGCTCACGTGGTTTCTCAGGAGGGTCGTTGACTATTCTCTTTTATCTTGTGCTTGCACCACCCAGCACCCCACTTTTTAGACTGAAGGATGTGTATTTTAATATGATTCTGTTTTCAATAAAGTGTACCCAGTCTGGATTAAACCTG
>XM_039792749.1
CTAAATAAATAAGTTGCCGTTACACCAGGTAAATGTTCCCTAATGAGAGGCGTTCAGCATAATTAGCAGGTTGGCGGGCGGAATAACGTTAGCGAAGTTGCCAGGAAGATTCACTCAACCTGCATGCGTCTTCAATCATGCAGAAGGACATAAGCTCCGTGATGTCCTGGTTCTCCAGCCCCGTGTACAGCCGCTACTGGCAGCACTACCAGCAGGCTATGGCCTGGCACCAGAGGCACGGGCGAGCCTACCGAAAGGCCTTGGAGGCGGCCTACGGCTACAGCCAGGAGGAGCGGTATCCCAGCAGCCACCAGCAGCGCTACGCTGACTGGAACGCAGGAGAGGAAGACGACGGCGAGGACGGGGACGAGGAGAGCGGCTCGGACAGCGAGATCGAGTGCGACGTCAGCAACATGGAGATCAGCGAGGAGCTTCGGCAGTACTTCGcccagacagagaaacacagagaggagctgaagaagcagcagcagttgGAGGCCGAGCAGCACGAGCGCTACGTGCCGGCCGACCAGGACCTGCGCGGCGCCTCCTGGCGAAGTAGCATGGCCCCTCCCTTGGAGCGACCGGGCGAAAGACGCGGCGCtgagatgaagaagctgtacgGCAGGGACGCCGCCAAGATCCTGGCCATGGAGGCGGCAATGCAGCTCAATTTCGACAGGAACTGTGACCTCAAACAGCCCAAGTACTGGCCTGTTATTCCACTGAAACTGTGACGGCTGCGGGCTGTGAACGCTTTGATTTGGAGGAAATCCCTTCCCTGATCTCTTGGTGAGACAGCAGCTTTGTCGTGTAATGGATTGTGGCTGCTGATGGAGAACTAATGGTGTCGCTTAGCTGAGGGTTACGAGTTATTTtaagcacaaaaaaaagttgcataaATTAGCCGAGCTTCTGCTTCGACAGACGCGAATGTTACTGACCTGTCAGCGGCCCTGCTCTAAATGAAAacgtatgatttttttttttttttttaatgctacaTATAACATTGGATTTCTTTGTTGCTTTACACGTTTACAGAAGTTTATTTTTAACTCCGGATCAAGCAAGCAACACTACCGTTTATCCAAGAGACTGCATGGTTTGTACATGGTCCTTCCAAAGTTGGTTTTGACAGATTTTCTGGACGAAAACTGAGAATCACCAAGAATAAAAGTGAATGTGCCTGCATGTAACCTCctaatgtgtttctgtgtaccCTCTAGCTGGGTGGTGATGCATGCGGCAGGAGCTCCTCTTATGCTTATCAACTTGGTCTAACCACAAAACCATTTCCAACCCCCCCCTTTTCCTCTGTTCAGATTTAGAAGTGCTCCCGCATCACTGCATCTGATATTCCACATTTCAACAAACCCACACGGagagtgattttgtttttgtcgttttctaAACTGTGCCTCTCTGGTTCTGACGTTTCACCGGGTTCAAAGCTGCTCACGTGGTTTCTCAGGAGGGTCGTTGACTATTCTCTTTTATCTTGTGCTTGCACCACCCAGCACCCCACTTTTTAGACTGAAGGATGTGTATTTTAATATGATTCTGTTTTCAATAAAGTGTACCCAGTCTGGATTAAACCTG
>XM_039792750.1
GTGTTTTAGTCGCTCGGTATTTTTGAATTAGCAGGTTGGCGGGCGGAATAACGTTAGCGAAGTTGCCAGGAAGATTCACTCAACCTGCATGCGTCTTCAATCATGCAGAAGGACATAAGCTCCGTGATGTCCTGGTTCTCCAGCCCCGTGTACAGCCGCTACTGGCAGCACTACCAGCAGGCTATGGCCTGGCACCAGAGGCACGGGCGAGCCTACCGAAAGGCCTTGGAGGCGGCCTACGGCTACAGCCAGGAGGAGCGGTATCCCAGCAGCCACCAGCAGCGCTACGCTGACTGGAACGCAGGAGAGGAAGACGACGGCGAGGACGGGGACGAGGAGAGCGGCTCGGACAGCGAGATCGAGTGCGACGTCAGCAACATGGAGATCAGCGAGGAGCTTCGGCAGTACTTCGcccagacagagaaacacagagaggagctgaagaagcagcagcagttgGAGGCCGAGCAGCACGAGCGCTACGTGCCGGCCGACCAGGACCTGCGCGGCGCCTCCTGGCGAAGTAGCATGGCCCCTCCCTTGGAGCGACCGGGCGAAAGACGCGGCGCtgagatgaagaagctgtacgGCAGGGACGCCGCCAAGATCCTGGCCATGGAGGCGGCAATGCAGCTCAATTTCGACAGGAACTGTGACCTCAAACAGCCCAAGTACTGGCCTGTTATTCCACTGAAACTGTGACGGCTGCGGGCTGTGAACGCTTTGATTTGGAGGAAATCCCTTCCCTGATCTCTTGGTGAGACAGCAGCTTTGTCGTGTAATGGATTGTGGCTGCTGATGGAGAACTAATGGTGTCGCTTAGCTGAGGGTTACGAGTTATTTtaagcacaaaaaaaagttgcataaATTAGCCGAGCTTCTGCTTCGACAGACGCGAATGTTACTGACCTGTCAGCGGCCCTGCTCTAAATGAAAacgtatgatttttttttttttttttaatgctacaTATAACATTGGATTTCTTTGTTGCTTTACACGTTTACAGAAGTTTATTTTTAACTCCGGATCAAGCAAGCAACACTACCGTTTATCCAAGAGACTGCATGGTTTGTACATGGTCCTTCCAAAGTTGGTTTTGACAGATTTTCTGGACGAAAACTGAGAATCACCAAGAATAAAAGTGAATGTGCCTGCATGTAACCTCctaatgtgtttctgtgtaccCTCTAGCTGGGTGGTGATGCATGCGGCAGGAGCTCCTCTTATGCTTATCAACTTGGTCTAACCACAAAACCATTTCCAACCCCCCCCTTTTCCTCTGTTCAGATTTAGAAGTGCTCCCGCATCACTGCATCTGATATTCCACATTTCAACAAACCCACACGGagagtgattttgtttttgtcgttttctaAACTGTGCCTCTCTGGTTCTGACGTTTCACCGGGTTCAAAGCTGCTCACGTGGTTTCTCAGGAGGGTCGTTGACTATTCTCTTTTATCTTGTGCTTGCACCACCCAGCACCCCACTTTTTAGACTGAAGGATGTGTATTTTAATATGATTCTGTTTTCAATAAAGTGTACCCAGTCTGGATTAAACCTG
>XM_039792751.1
CCAGAATTTAATTTGCTGTGGCTCAAAGGCTGCTGGGAAATTTGGCTTTCAGGAAGCAGCATGAGCCACTAAATAAATAAGTTGCCGTTACACCAGAATTAGCAGGTTGGCGGGCGGAATAACGTTAGCGAAGTTGCCAGGAAGATTCACTCAACCTGCATGCGTCTTCAATCATGAAGGACATAAGCTCCGTGATGTCCTGGTTCTCCAGCCCCGTGTACAGCCGCTACTGGCAGCACTACCAGCAGGCTATGGCCTGGCACCAGAGGCACGGGCGAGCCTACCGAAAGGCCTTGGAGGCGGCCTACGGCTACAGCCAGGAGGAGCGGTATCCCAGCAGCCACCAGCAGCGCTACGCTGACTGGAACGCAGGAGAGGAAGACGACGGCGAGGACGGGGACGAGGAGAGCGGCTCGGACAGCGAGATCGAGTGCGACGTCAGCAACATGGAGATCAGCGAGGAGCTTCGGCAGTACTTCGcccagacagagaaacacagagaggagctgaagaagcagcagcagttgGAGGCCGAGCAGCACGAGCGCTACGTGCCGGCCGACCAGGACCTGCGCGGCGCCTCCTGGCGAAGTAGCATGGCCCCTCCCTTGGAGCGACCGGGCGAAAGACGCGGCGCtgagatgaagaagctgtacgGCAGGGACGCCGCCAAGATCCTGGCCATGGAGGCGGCAATGCAGCTCAATTTCGACAGGAACTGTGACCTCAAACAGCCCAAGTACTGGCCTGTTATTCCACTGAAACTGTGACGGCTGCGGGCTGTGAACGCTTTGATTTGGAGGAAATCCCTTCCCTGATCTCTTGGTGAGACAGCAGCTTTGTCGTGTAATGGATTGTGGCTGCTGATGGAGAACTAATGGTGTCGCTTAGCTGAGGGTTACGAGTTATTTtaagcacaaaaaaaagttgcataaATTAGCCGAGCTTCTGCTTCGACAGACGCGAATGTTACTGACCTGTCAGCGGCCCTGCTCTAAATGAAAacgtatgatttttttttttttttttaatgctacaTATAACATTGGATTTCTTTGTTGCTTTACACGTTTACAGAAGTTTATTTTTAACTCCGGATCAAGCAAGCAACACTACCGTTTATCCAAGAGACTGCATGGTTTGTACATGGTCCTTCCAAAGTTGGTTTTGACAGATTTTCTGGACGAAAACTGAGAATCACCAAGAATAAAAGTGAATGTGCCTGCATGTAACCTCctaatgtgtttctgtgtaccCTCTAGCTGGGTGGTGATGCATGCGGCAGGAGCTCCTCTTATGCTTATCAACTTGGTCTAACCACAAAACCATTTCCAACCCCCCCCTTTTCCTCTGTTCAGATTTAGAAGTGCTCCCGCATCACTGCATCTGATATTCCACATTTCAACAAACCCACACGGagagtgattttgtttttgtcgttttctaAACTGTGCCTCTCTGGTTCTGACGTTTCACCGGGTTCAAAGCTGCTCACGTGGTTTCTCAGGAGGGTCGTTGACTATTCTCTTTTATCTTGTGCTTGCACCACCCAGCACCCCACTTTTTAGACTGAAGGATGTGTATTTTAATATGATTCTGTTTTCAATAAAGTGTACCCAGTCTGGATTAAACCTG
>XM_039792752.1
TTTAGTCGCTCGGTATTTTTGAATTAGCAGGTTGGCGGGCGGAATAACGTTAGCGAAGTTGCCAGGAAGATTCACTCAACCTGCATGCGTCTTCAATCATGAAGGACATAAGCTCCGTGATGTCCTGGTTCTCCAGCCCCGTGTACAGCCGCTACTGGCAGCACTACCAGCAGGCTATGGCCTGGCACCAGAGGCACGGGCGAGCCTACCGAAAGGCCTTGGAGGCGGCCTACGGCTACAGCCAGGAGGAGCGGTATCCCAGCAGCCACCAGCAGCGCTACGCTGACTGGAACGCAGGAGAGGAAGACGACGGCGAGGACGGGGACGAGGAGAGCGGCTCGGACAGCGAGATCGAGTGCGACGTCAGCAACATGGAGATCAGCGAGGAGCTTCGGCAGTACTTCGcccagacagagaaacacagagaggagctgaagaagcagcagcagttgGAGGCCGAGCAGCACGAGCGCTACGTGCCGGCCGACCAGGACCTGCGCGGCGCCTCCTGGCGAAGTAGCATGGCCCCTCCCTTGGAGCGACCGGGCGAAAGACGCGGCGCtgagatgaagaagctgtacgGCAGGGACGCCGCCAAGATCCTGGCCATGGAGGCGGCAATGCAGCTCAATTTCGACAGGAACTGTGACCTCAAACAGCCCAAGTACTGGCCTGTTATTCCACTGAAACTGTGACGGCTGCGGGCTGTGAACGCTTTGATTTGGAGGAAATCCCTTCCCTGATCTCTTGGTGAGACAGCAGCTTTGTCGTGTAATGGATTGTGGCTGCTGATGGAGAACTAATGGTGTCGCTTAGCTGAGGGTTACGAGTTATTTtaagcacaaaaaaaagttgcataaATTAGCCGAGCTTCTGCTTCGACAGACGCGAATGTTACTGACCTGTCAGCGGCCCTGCTCTAAATGAAAacgtatgatttttttttttttttttaatgctacaTATAACATTGGATTTCTTTGTTGCTTTACACGTTTACAGAAGTTTATTTTTAACTCCGGATCAAGCAAGCAACACTACCGTTTATCCAAGAGACTGCATGGTTTGTACATGGTCCTTCCAAAGTTGGTTTTGACAGATTTTCTGGACGAAAACTGAGAATCACCAAGAATAAAAGTGAATGTGCCTGCATGTAACCTCctaatgtgtttctgtgtaccCTCTAGCTGGGTGGTGATGCATGCGGCAGGAGCTCCTCTTATGCTTATCAACTTGGTCTAACCACAAAACCATTTCCAACCCCCCCCTTTTCCTCTGTTCAGATTTAGAAGTGCTCCCGCATCACTGCATCTGATATTCCACATTTCAACAAACCCACACGGagagtgattttgtttttgtcgttttctaAACTGTGCCTCTCTGGTTCTGACGTTTCACCGGGTTCAAAGCTGCTCACGTGGTTTCTCAGGAGGGTCGTTGACTATTCTCTTTTATCTTGTGCTTGCACCACCCAGCACCCCACTTTTTAGACTGAAGGATGTGTATTTTAATATGATTCTGTTTTCAATAAAGTGTACCCAGTCTGGATTAAACCTG
>XR_005638319.1
CCAGAATTTAATTTGCTGTGGCTCAAAGGCTGCTGGGAAATTTGGCTTTCAGGAAGCAGCATGAGCCACTAAATAAATAAGTTGCCGTTACACCAGAATTAGCAGGTTGGCGGGCGGAATAACGTTAGCGAAGTTGCCAGGAAGATTCACTCAACCTGCATGCGTCTTCAATCATGCAGAAGGACATAAGCTCCGTGATGTCCTGGTTCTCCAGCCCCGTGTACAGCCGCTACTGGCAGCACTACCAGCAGGCTATGGCCTGGCACCAGAGGCACGGGCGAGCCTACCGAAAGGCCTTGGAGGCGGCCTACGGCTACAGCCAGGAGGAGCGGTATCCCAGCAGCCACCAGCAGCGCTACGCTGACTGGAACGCAGGAGAGGAAGACGACGGCGAGGACGGGGACGAGGAGAGCGGCTCGGACAGCGAGATCGAGTGCGACGTCAGCAACATGGAGATCAGCGAGGAGCTTCGGCAGTACTTCGcccagacagagaaacacagagaggagctgaagaagcagcagcagttgGAGGCCGAGCAGCACGAGCGCTACGTGCCGGCCGACCAGGACCTGCGCGGCGCCTCCTGGCGAAGTAGCATGGCCCCTCCCTTGGAGCGACCGGGCGAAAGACGCGGCGCtgagatgaagaagctgtacgGCAGGGACGCCGCCAAGATCCTGGCCATGGAGGCGGCAATGCAGCTCAATTTCGACAGGAACTGTGACCTCAAACAGCCCAAGTACTGGCCTGTTATTCCACTGAAACTGTGACGGCTGCGGGCTGTGAACGCTTTGATTTGGAGGAAATCCCTTCCCTGATCTCTTGAAGTTTATTTTTAACTCCGGATCAAGCAAGCAACACTACCGTTTATCCAAGAGACTGCATGGTTTGTACATGGTCCTTCCAAAGTTGGTTTTGACAGATTTTCTGGACGAAAACTGAGAATCACCAAGAATAAAAGTGAATGTGCCTGCATGTAACCTCctaatgtgtttctgtgtaccCTCTAGCTGGGTGGTGATGCATGCGGCAGGAGCTCCTCTTATGCTTATCAACTTGGTCTAACCACAAAACCATTTCCAACCCCCCCCTTTTCCTCTGTTCAGATTTAGAAGTGCTCCCGCATCACTGCATCTGATATTCCACATTTCAACAAACCCACACGGagagtgattttgtttttgtcgttttctaAACTGTGCCTCTCTGGTTCTGACGTTTCACCGGGTTCAAAGCTGCTCACGTGGTTTCTCAGGAGGGTCGTTGACTATTCTCTTTTATCTTGTGCTTGCACCACCCAGCACCCCACTTTTTAGACTGAAGGATGTGTATTTTAATATGATTCTGTTTTCAATAAAGTGTACCCAGTCTGGATTAAACCTG

Function

symbol description
gemin8 Predicted to be involved in spliceosomal snRNP assembly. Predicted to be part of SMN complex. Orthologous to human GEMIN8 (gem nuclear organelle associated protein 8).

NR:

description
PREDICTED: gem-associated protein 8 isoform X1

GO: NA

KEGG:

id description
K13136 GEMIN8; gem associated protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792748.1 True 1638 mRNA 0.50 4 11046296 11049407
XM_039792749.1 False 1602 mRNA 0.50 4 11046364 11049407
XM_039792750.1 False 1567 mRNA 0.50 4 11046460 11049407
XM_039792751.1 False 1635 mRNA 0.50 4 11046296 11049407
XM_039792752.1 False 1560 mRNA 0.50 4 11046464 11049407
XR_005638319.1 False 1386 transcript 0.52 5 11046296 11049407

Neighbor

gene id symbol gene type direction distance location
LOC120554118 NA coding upstream 55969 10972258 ~ 10990327 (+)
LOC120554112 NA coding upstream 127953 10906797 ~ 10918343 (+)
LOC120554113 NA coding upstream 139811 10901295 ~ 10906485 (+)
LOC120554106 LOC104937628,LOC103361286 coding upstream 192828 10839102 ~ 10853468 (+)
LOC120554107 stoml2,LOC103361287,LOC104937629,LOC104954639 coding upstream 209823 10822966 ~ 10836473 (+)
LOC120554128 LOC101077481,LOC103361270,LOC104935061,LOC108246803 coding downstream 377 11049784 ~ 11091687 (+)
LOC120554134 aamp coding downstream 183288 11232695 ~ 11243167 (+)
LOC120554136 gpbar1 coding downstream 199386 11248793 ~ 11252073 (+)
LOC120554138 NA coding downstream 211022 11260429 ~ 11264177 (+)
LOC120554141 NA coding downstream 225598 11275005 ~ 11291114 (+)
G233941 NA non-coding upstream 93318 10947922 ~ 10952978 (+)
LOC120554114 NA non-coding upstream 124176 10921241 ~ 10922120 (+)
G233896 NA non-coding upstream 160262 10882267 ~ 10886034 (+)
G233891 cbs,LOC101487143,LOC102192167,LOC106958598,LOC102789306,LOC100707752,LOC103147202,LOC106531788 non-coding upstream 168816 10876865 ~ 10877480 (+)
G233890 LOC106593678,LOC106582148,LOC100707752,LOC106562750,LOC107557921 non-coding upstream 171600 10872822 ~ 10874696 (+)
G233987 NA non-coding downstream 46109 11095516 ~ 11139279 (+)
G233994 NA non-coding downstream 72451 11121858 ~ 11141816 (+)
G234001 NA non-coding downstream 111589 11160996 ~ 11166024 (+)
G234010 NA non-coding downstream 181080 11230487 ~ 11232506 (+)
G234079 NA non-coding downstream 283871 11333278 ~ 11334092 (+)
pln NA other upstream 456214 10579826 ~ 10590082 (+)
trnas-cga_10 NA other upstream 657241 10388974 ~ 10389055 (+)
LOC120554323 LOC104929110,LOC103356760,LOC101067516,LOC102314427,LOC102201222,LOC101482517,LOC107381121,LOC106905396,LOC103147142,LOC106529266 other upstream 1226731 9726383 ~ 9819565 (+)
prkag3a prkag3,LOC103372145,LOC104934537 other upstream 1581979 9460752 ~ 9464317 (+)
pard3ba LOC103357367 other upstream 1704883 9197518 ~ 9341413 (+)
G234085 mest other downstream 313134 11362541 ~ 11380103 (+)
G234095 NA other downstream 344257 11393664 ~ 11395346 (+)
LOC120554149 erbb4,LOC102292440,LOC101467929,LOC100701577 other downstream 802982 11852389 ~ 12152440 (+)
LOC120554357 NA other downstream 1250225 12299632 ~ 12357177 (+)
LOC120554058 obsl1,LOC102777652 other downstream 1308620 12358027 ~ 12369221 (+)

Expression


Co-expression Network