LOC120554130


Basic Information

Item Value
gene id LOC120554130
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11104367 ~ 11105832 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792758.1
GTCCAACTCTGTGAGGCTACAGCACCATCTAGAGGTGAATTCAGGCAACTTCCTGTTTTAAAGACagatccaacatggctgccccctTGTAGACGTTTTAAGGCGAGCTGCTTGTGTGAAGTAACTGCAAACCATGAGGGATTTTCAGcCACCATGGATGCAAAAGAAATAGTCCACTGTGCTGTGCAGATAGAGCGATCCCTTGCAGAGAGAAGCTACGGGAACATCTTGACCCTCCTTGGTGACGTTGATAAGTTGCACGTCACAGCAGAGCAGCTGGAAACGACGGACATTGTTAGAGTACTCTACAGGCTCCTGAAGAGCTGCTCTGACGTCAGCGTGAAGAAGACCGCGAAGAGCCTGCTGTCCAAGTGGAAGAGGGAGTACGGCAAAGACACACGTGGTGTGAAATGCACGGGGGATGCTGAGCTCTCTCGCAGGGCTCCTCTACCAGATGATGAGGCAGGCGATGGAGGAGTTTCCGAGCACGGGGATTCCCACGCTGGTTCTGCACACGCATGTGGCAGTCAGGTGAAGTGTGCAGAGCAGGGAGCCTCATCCCCCGAGGCACACGATGGCCTTTCTTTCACTGCAGAGAGCACATCCGCATCCCGTAGTTTCTCACCTGTACGATCTAAATGTGTTCAGCTCCTTCTTGCTGCCCTCTGCCCCGAACTCCCTGATCAAGACAAGGCTGCAGAGCTCGCTGCAGATATCGAGCAGCACGTCCACGAGCTCCACAAACCCAGCCAGGGCAAATACAAAGCCTGCGTGAGGAGCAAGGTGGCCAACTTGAGAAATCCTAAAAACGGGCACCTACGCCAGGGCCTCCTGAGCGGCTCGCTGTCACCCGAGGCCTTCGCCCGGATGTCTCCAGAGGAGATGGCCGGCGCAGAGCTCCGGAAGCTGAGAGAGGAGTACTCGTCTCGTGGTGTGAGCGAAAGGCAGCTTCCTCGAGGGATAGAAGGAACGCAGACGCAGAAGATAAGATGCAAGCGATGCGGGGGGTCAGACTGTCGGGTGACGCAGGTGTCCAGGGGCGCCCTCTTCTTGCCTGCGTGGGTGAGGCAGAGCGGCCCTGATGAAGACGCAATGACTTTTGTGACCTGCAGCGAGTGTGGGCAGCAGTGGTACCACAGCAGCTGGGTCTGCCTCTGATTAACAAGTATCAGATTGATCATTCAGTATCTATCACAGTAAATCAATCCGCAACAATtttgaatatacagtacaggccaaaagtttggacacaccttctcattcaatgtgttcctttattttcatgactatttacattgtagattctcact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792758.1 True 1310 mRNA 0.54 2 11104367 11105832

Neighbor

gene id symbol gene type direction distance location
LOC120554129 LOC103361269,LOC104942788,LOC103151927 coding downstream 3214 11095516 ~ 11101153 (-)
LOC120554122 NA coding downstream 75006 11020833 ~ 11029361 (-)
LOC120554124 NA coding downstream 85705 11013995 ~ 11018662 (-)
LOC120554123 NA coding downstream 90729 11011232 ~ 11013638 (-)
LOC120554120 NA coding downstream 109007 10990549 ~ 10995360 (-)
LOC120554132 prps2 coding upstream 34705 11140537 ~ 11150651 (-)
LOC120554133 NA coding upstream 49094 11154926 ~ 11220986 (-)
LOC120554135 NA coding upstream 124389 11230221 ~ 11232384 (-)
LOC120554137 NA coding upstream 147814 11253646 ~ 11260652 (-)
arpc2 arpc2 coding upstream 159724 11265556 ~ 11274982 (-)
G234024 NA non-coding downstream 10185 11041186 ~ 11094182 (-)
G234026 NA non-coding downstream 21199 11060811 ~ 11083168 (-)
LOC120554121 NA non-coding downstream 146077 10957910 ~ 10958290 (-)
G233939 NA non-coding downstream 180551 10915974 ~ 10923816 (-)
LOC120554109 NA non-coding downstream 256012 10837792 ~ 10848355 (-)
G234032 NA non-coding upstream 46010 11151842 ~ 11152551 (-)
G234051 NA non-coding upstream 178960 11284792 ~ 11285090 (-)
G234063 NA non-coding upstream 199779 11305611 ~ 11306703 (-)
G234078 NA non-coding upstream 226449 11332281 ~ 11332560 (-)
G234080 NA non-coding upstream 227535 11333367 ~ 11334089 (-)
LOC120554127 NA other downstream 57408 11037355 ~ 11046959 (-)
G233954 NA other downstream 135257 10948468 ~ 10969110 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other downstream 579282 10464322 ~ 10525085 (-)
LOC120554082 NA other downstream 716434 10383688 ~ 10387933 (-)
G233703 atg13 other downstream 831508 10271069 ~ 10272859 (-)
LOC120554131 NA other upstream 30795 11136627 ~ 11139245 (-)
spega LOC103358966 other upstream 282720 11388552 ~ 11441926 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other upstream 353105 11458937 ~ 11489477 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other upstream 418550 11524382 ~ 11538321 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 1172687 12278519 ~ 12293143 (-)

Expression


Co-expression Network