LOC120554132 (prps2)


Basic Information

Item Value
gene id LOC120554132
gene name prps2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11140537 ~ 11150651 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792761.1
ACTGACCTGAAATTCCCTCTCTGCTCGCCACCCCAGTGCTGAACCATTGCAATGCTAAGGCTGCAACGTTAGCACGctatttttccattttcatAACCCTTGAGTGGGTCtacctgttgtatttttttttttactctcctttcttttcctttttaagcAAACGGCAGCGGTTTACGGACATGCCTAACATCGTGCTTTTTAGCGGGAGCTCCCACCACGACCTGTCCCAGAAAGTGGCTGATCGACTGGGACTAGAGCTGGGGAAAGTCATAACGAAAAAATTCAGCAATCAGGAGACATGCGTGGAGATCGGGGAAAGCGTGCGCGGCGAGGACGTGTACATCGTGCAGAGCGGCTGCGGCGAAATCAACGACAACCTGATGGAGCTGCTCATCATGATTAACGCCTGCAAGATTGCCTCCTCGTCCCGTGTGACCGCAGTCATCCCCTGCTTCCCCTACGCCCGGCAGGACAAAAAGGACaagAGCCGAGCACCCATATCAGCCAAGCTGGTGGCGAACATGTTGTCCGTGGCCGGCGCCGACCACATCATCACGATGGACCTCCACGCCTCACAGATCCAGGGCTTTTTTGACATCGCCGTGGACAACCTTTACGCAGAGCCCGCTGTCCTGCAGTGGATCAGAGAAAATATTCCAGAGTGGAAAAACTGTATCATCGTGTCCCCAGATGCCGGCGGAGCGAAGCGCGTGACGTCCATCGCGGACCGTCTGAACGTGGACTTCGCGCTCATCCACAAAGAGCGGAAGAAGGCCAACGAAGTGGACCGCATGGTGCTGGTGGGCGACGTCAAGGACCGCGTGGCCATCATGGTGGACGACATGGCCGACACCTGTGGCACCATCTGCCACGCCGCCGACAAGCTGATTGATGCGGGCGCAGTAAAGGTTTACGCCATCCTCACACACGGCATCTTCTCGGGCCCCGCCATCTCTCGCATTAACAGCGCCCCGTTCGAGGCCGTAGTGGTGACCAACACCATCCCACAGGAAGAGAAGATGAAGGCGTGCCCCAAAATACAGGTCATCGACATCTCCATGATCCTGGCGGAGGCGATCAGGAGAACCCACAACGGCGAGTCAGTGTCCTACCTCTTCAGCCACGTACCCTTGTAAAGAATGAGAGAGGGTGGCCCCCGGCCTTCTCCCTGACACCCCCTCACCCCCTTGGGCCACTTGGCTGGCACTTGGTTGCCACATATCCTCCAGAATAGGCTCGAAAAGAGGCCTTATGGTTTTTGGCCAACCTCAGTATGACTGTTTCAAATGTCATGGCCACACATTGTTTGAcattttcacccaggagacagaGCGACATTTCACTTCCTTCTCTGAAGACCAAGTTTGTATTtatggatatgtttattttttttttttatttctttatttttattttcagtttgagTCTAGCTGACCTTGATCACCCGAGGCCTGGCTTTCATTTTAACCAAAGGCTCCATTATGTAACTGTGTATTATTTGTACCTCATATTGAACTCGCGTTAAACGAAGCATTCCACTATGTCATGTGATGAGAAATAATTTTGGCCCATTCGGCTtcataaaatcataaaaatagttAAGAATGTGGTATAGTGTTTTGCTTTAACAGCTgctaaaagtattaaaataaaaatagcctAACCCTTAAATGCTTGATTGTAAAAGTTTCTGCTTAGTGCCATCATCAGGCCACAGTTTAAAATCTGCAGCGCCAGTGGAAGTGTGTTGATCTgaccacagacacaaacaggagTCAAATGAAAGATACACACTTAATTTACTcacttttagttttgtttttctttattagtgAGCCGCGTGAATGTGCCACCATTTCTCCCACCATAAGCTGCTGTCACCCATCGGTGGCTCATCTGTATGACAAGCTTGTCCTTTAATAATTGTgcttaaaaggaaaaaaaaatgtactgaCAAGGTCTGTTGGGGATTTAAAGGTGTATATTACGAGGTTTCGTTGGGTGTTTTACCCGTGTTCCAAAAGGTCATGAAATCAAGTTGAGCCCTAAGCTTGTTATAGTGTTATGATTTCTACCGTAATTTGTCTTAAAAAATAGTGAAATTGTCATCACAGCTGTAACGGGTCACTTATGTATTGAATGAGGCAGGTTTCACTGTTTGCCTGTAGgtgaattaaaaatgttttttggtgGAAAAGTGTGAtttaactcttttttttgttatgttaaCCCTTGAGAGCTGTTTCTTTGACAATAAAGCTTTGACAATGGCTTACA

Function

symbol description
prps2 Enables identical protein binding activity. Predicted to be involved in 5-phosphoribose 1-diphosphate biosynthetic process and purine nucleotide biosynthetic process. Predicted to be part of ribose phosphate diphosphokinase complex. Predicted to be active in cytoplasm.

NR:

description
PREDICTED: ribose-phosphate pyrophosphokinase 2

GO:

id name namespace
GO:0009165 nucleotide biosynthetic process biological_process
GO:0004749 ribose phosphate diphosphokinase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K00948 PRPS, prsA; ribose-phosphate pyrophosphokinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792761.1 True 2277 mRNA 0.47 7 11140537 11150651

Neighbor

gene id symbol gene type direction distance location
LOC120554130 NA coding downstream 34705 11104367 ~ 11105832 (-)
LOC120554129 LOC103361269,LOC104942788,LOC103151927 coding downstream 39384 11095516 ~ 11101153 (-)
LOC120554122 NA coding downstream 111176 11020833 ~ 11029361 (-)
LOC120554124 NA coding downstream 121875 11013995 ~ 11018662 (-)
LOC120554123 NA coding downstream 126899 11011232 ~ 11013638 (-)
LOC120554133 NA coding upstream 4275 11154926 ~ 11220986 (-)
LOC120554135 NA coding upstream 79570 11230221 ~ 11232384 (-)
LOC120554137 NA coding upstream 102995 11253646 ~ 11260652 (-)
arpc2 arpc2 coding upstream 114905 11265556 ~ 11274982 (-)
LOC120554144 NA coding upstream 156110 11306761 ~ 11314144 (-)
G234024 NA non-coding downstream 46355 11041186 ~ 11094182 (-)
G234026 NA non-coding downstream 57369 11060811 ~ 11083168 (-)
LOC120554121 NA non-coding downstream 182247 10957910 ~ 10958290 (-)
G233939 NA non-coding downstream 216721 10915974 ~ 10923816 (-)
LOC120554109 NA non-coding downstream 292182 10837792 ~ 10848355 (-)
G234032 NA non-coding upstream 1191 11151842 ~ 11152551 (-)
G234051 NA non-coding upstream 134141 11284792 ~ 11285090 (-)
G234063 NA non-coding upstream 154960 11305611 ~ 11306703 (-)
G234078 NA non-coding upstream 181630 11332281 ~ 11332560 (-)
G234080 NA non-coding upstream 182716 11333367 ~ 11334089 (-)
LOC120554131 NA other downstream 1292 11136627 ~ 11139245 (-)
LOC120554127 NA other downstream 93578 11037355 ~ 11046959 (-)
G233954 NA other downstream 171427 10948468 ~ 10969110 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other downstream 615452 10464322 ~ 10525085 (-)
LOC120554082 NA other downstream 752604 10383688 ~ 10387933 (-)
spega LOC103358966 other upstream 237901 11388552 ~ 11441926 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other upstream 308286 11458937 ~ 11489477 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other upstream 373731 11524382 ~ 11538321 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 1127868 12278519 ~ 12293143 (-)
G234405 NA other upstream 1802439 12953090 ~ 12954125 (-)

Expression


Co-expression Network