LOC120554135


Basic Information

Item Value
gene id LOC120554135
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11230221 ~ 11232384 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792770.1
agtcTGCGCAGTACGCTCAGCTCTCACCGGAAACGTGCTTcttcttcactggtctccgtccgtCTTTAGCTTTACTCCGTCGAAGTCATGGTCGAAGTTAGCGTTGTTTACCTCTGTGGGCCACATGCTGGTGGTGCTATGCAAAATAAATCTATATAAACTTCTGGTCATCGTTCAAGACAAGTATTGTGTCATAGGtggtatttttttaattcagtgtGTTAACTAGCTAGTTGTTTGttgccgttttttgtttttttctcgtTAGTGCGAACATGTCTTGCTGTGTAGCAAACATGTGTTCTAACAGACAAGGTTCCGggttaagctttttcaaGTTCCCCCTCAATGACAAAGACCGGTTGAAGCAGTGGATACACAATGTCAAGAGAACGAGCTGGACGCCAACCAAGCATTCTCGCCTCTGCGCCATTCACTTCAGACAGGACTGTTTCCTCGTTTTCCGGGAAAGGATTATGCTTAAACCAGACGCCGTGCCAACCATCTTCTACCCAGATTTACATGCGAAGGCCAAGGTGAGGCACACCAGCGTCAGTAGGAACGCGACGGCTAGGAAGACTGACCCTGCCACGCAAGCGCGTAGACGCAGGAACGTCAGTCATGACCACGATTACATCGTTTGCGCTCCCAGCGAACCGCAGACGGTCGAGGCGAACGTAGCCAGCTGCGAGCGTAGCCCTTCTGCAGATCACGGCGGGTACTCGCTGAAAACCTCCGCCAGTCCTCTACAGGGGAAGGCGCCGCTTCTTCAGAGTAGATTGCTTTCTTGCAAGAAAAAGATGAAGCTTCAAGAGCAGACCATCAGAAGACTGAAACAGAAAGTGGCGTCTCCCTCCTCAGTTGTTCCAAGTTGCTCGTGTTCTTGCAAGAAAAAAGTGAAGCTTGAAAGCGGACAATCCGAAGACTGAAACAGAAGGTGAAGTCTCTCTCCTCGGTTGTCACCGAGCTGGAAGAGAAGCTGCGTGTTGCCACCAACGGCGGCGACGTGCTGGAGGCTTCCTTTAGCGGAGAAATTCAAGTGATCCTTGAGTAAGGCGCACAGCATCGCCCCCAAAAGACTGATCTCCCCTCACCTCGGGCCACCAccggaggaaaaaaaagtgcttctaattgacTTCACCGGTCTCTGTCTGGTGTCGCTgtgtccatttattttactgtctatggataaTAGGCTACCGCTCAGAAAATATTGCATAACCATGTTTGGAGGATGTTTCAATGGCTGAGGTTGATTTTATAAAGATGCTTCGACCCCTTATTATGTTATTTCTGTTCATAAACATTGTCGTTaacacaaaatctttttttttttttttttgcattttgtatcCCACTTAAGCATGATAGCATATTAATAGGCTACTAGAATAACAGCTACTGCTACTACCACACTACAACAGattttatcttttattatttattatttattttgtgttttttatgctTAGTTTTGTGCACAGAACAATTCTGTCTCAATGTAGTCATGATAATAAGCCAGTTCCAATAAAGAGATATTTACCTGACAGGAAATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792770.1 True 1558 mRNA 0.45 2 11230221 11232384

Neighbor

gene id symbol gene type direction distance location
LOC120554133 NA coding downstream 9235 11154926 ~ 11220986 (-)
LOC120554132 prps2 coding downstream 79570 11140537 ~ 11150651 (-)
LOC120554130 NA coding downstream 124389 11104367 ~ 11105832 (-)
LOC120554129 LOC103361269,LOC104942788,LOC103151927 coding downstream 129068 11095516 ~ 11101153 (-)
LOC120554122 NA coding downstream 200860 11020833 ~ 11029361 (-)
LOC120554137 NA coding upstream 21262 11253646 ~ 11260652 (-)
arpc2 arpc2 coding upstream 33172 11265556 ~ 11274982 (-)
LOC120554144 NA coding upstream 74377 11306761 ~ 11314144 (-)
LOC120554143 LOC104935050 coding upstream 82298 11314682 ~ 11323086 (-)
LOC120554162 ctdsp1,LOC104928328,LOC104957766,LOC103148703 coding upstream 138569 11370953 ~ 11387252 (-)
G234032 NA non-coding downstream 77670 11151842 ~ 11152551 (-)
G234024 NA non-coding downstream 136039 11041186 ~ 11094182 (-)
G234026 NA non-coding downstream 147053 11060811 ~ 11083168 (-)
LOC120554121 NA non-coding downstream 271931 10957910 ~ 10958290 (-)
G233939 NA non-coding downstream 306405 10915974 ~ 10923816 (-)
G234051 NA non-coding upstream 52408 11284792 ~ 11285090 (-)
G234063 NA non-coding upstream 73227 11305611 ~ 11306703 (-)
G234078 NA non-coding upstream 99897 11332281 ~ 11332560 (-)
G234080 NA non-coding upstream 100983 11333367 ~ 11334089 (-)
G234152 NA non-coding upstream 104226 11336610 ~ 11341839 (-)
LOC120554131 NA other downstream 90976 11136627 ~ 11139245 (-)
LOC120554127 NA other downstream 183262 11037355 ~ 11046959 (-)
G233954 NA other downstream 261111 10948468 ~ 10969110 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other downstream 705136 10464322 ~ 10525085 (-)
LOC120554082 NA other downstream 842288 10383688 ~ 10387933 (-)
spega LOC103358966 other upstream 156168 11388552 ~ 11441926 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other upstream 226553 11458937 ~ 11489477 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other upstream 291998 11524382 ~ 11538321 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other upstream 1046135 12278519 ~ 12293143 (-)
G234405 NA other upstream 1720706 12953090 ~ 12954125 (-)

Expression


Co-expression Network