LOC120554141


Basic Information

Item Value
gene id LOC120554141
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11275005 ~ 11291114 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792778.1
ATTAGGAGACCCGCAATGTTGCCTGTACTAAATTCGCAGCAACATGTCAGAAACAGCTTTAATTTACCAATCATGTCGTTCATCTATAGCTTTGAGAATTATGAACTGAATGAAACCATCCACAACAACTACACAACCTACGTTCCGGATCCAGAGAAGATATCATGTAGGACAGAACCTCTGGCTCCTACAGCAGCGCTGACCCTGTGTCTCATCCTCATTGCCATCTTTTTCCTGGCAGTACCTGGGAACCTGTTAGTGGGGTGGGTGATTGGCACCAGCAGACAGATGCTGACTCCGTCGGATGTGTACCTGTTTCACTTAACAATAGCGGATGGTCTGATGGCCCTAACCCTCCCATTCTGGGCCGCTGCAGCTATCCAAGGATGGATCTTTGGAGACTTAATGTGCAAGCTCCTCAGCCTCATCAAAGAAGCAAACTTCTACACCAGCATCCTCTTTCTGGCCTGCATTAGCATTGACCGCTATCTTGTGATAGTGCACGCCAGTGAGAGTCTCCAGAGTCGTCAGAGGATGTGCACCCGGATCCTGTGTGCAGCAGTTTGGGCCCTTGGTGTGGCCCTCGCTCTGCCTGCGCTTTTCAACGATGCCTCCAAGCTACCTAACTCAGAGGGGATGATGTGCCAAGAATCCTTTCACATCGGCAGCGCCTCCTTATGGAGGAGTTTCACTCGCGGGTTTCGCCATATTTTTGGCTTCTTGCTCCCTCTGGGTGCCATGATAGCCTGCTACAGCGTCACCATCGCGAGGCTGCTGCGCACTCGAGGTTTCCAGAAGCACAGGGCCATGAAGGTGATCATAGCCGTGGTGATTGCGTTTCTTCTGTGCTGGACGCCATACCACATAGTCCTGATAGTGGAAACACTCCTGAGGGCTAAGCTGATAAATTATGACTGTGCTTTGAGGAAATCAGTGGACAGGGCTTTGTATATAAGTCAAAACCTGGCTCTGTCCCACAGCTGCATCAACCCTTTCCTCTATGCCTTCGTAGGAGTGAAGTTCAGGAACAAAATGACACGACTTCTTCCGCGGAAAGCCAGACAGGAGTGGATGTCGGGGTCAAAGTTCAGCAGGTCGACATCTCAGACCTCAGAAACGAACGGAGCTGTTCTTTGAAATCGATCAATGTAGactaacattttttaaatatatatgtttatgattgtgtattttcccttttttgtttCATGCATTCTCTAATTTTGATCTGTGGTACACTGCTGCCATCTATTGGATTTACTGTTTCTCTACATCCACTATTGAAGCCTCTGATTTGATCAAatctattttcattttttctcaTTATTTCCATTTTCCTTGCTCAGGAATAGACCAGCATTATAATTCTGTAAATTaattttagtgtttttaatCTTGGAGTGCATGTATTAAATAGGTCTATACAATAGGTACCCCCAATTCAACCCTTCACTCTGACACAGCTTTTATAATCCATCTGATGTTTCCGTTTATTTAtagcctatactgtatatgctaaaaatgttttataaactGTAAATCCTGCTGTCTTCATGTTTCAGTGTTTTCAGGTTCCAACAAGTTCATCAttagcagactgatctcatatatttacgcaaagtcatgatgccatgttgtcaTTAGAAATAAAAGGCTATGCAATCTTTCTTGCACTGACTGATTTAATCTTGTAGACTTGTGGTTAGTTAATATTCACACAGGGTATTTTCtgacaaataaaataatgaacAACTCA
>XM_039792779.1
TCATGACGTAGTATCATATCGGGGAAGGAAACAGGATATTGGGTCAACTAcccataaaaaaagacattatattacACTTAAAAGGAGGCACACATTTGGTCGTTGAACTGTTGTCATCTTTGAAAGCTACGGCCAAGTCAGAAGTCATGTCGTTCATCTATAGCTTTGAGAATTATGAACTGAATGAAACCATCCACAACAACTACACAACCTACGTTCCGGATCCAGAGAAGATATCATGTAGGACAGAACCTCTGGCTCCTACAGCAGCGCTGACCCTGTGTCTCATCCTCATTGCCATCTTTTTCCTGGCAGTACCTGGGAACCTGTTAGTGGGGTGGGTGATTGGCACCAGCAGACAGATGCTGACTCCGTCGGATGTGTACCTGTTTCACTTAACAATAGCGGATGGTCTGATGGCCCTAACCCTCCCATTCTGGGCCGCTGCAGCTATCCAAGGATGGATCTTTGGAGACTTAATGTGCAAGCTCCTCAGCCTCATCAAAGAAGCAAACTTCTACACCAGCATCCTCTTTCTGGCCTGCATTAGCATTGACCGCTATCTTGTGATAGTGCACGCCAGTGAGAGTCTCCAGAGTCGTCAGAGGATGTGCACCCGGATCCTGTGTGCAGCAGTTTGGGCCCTTGGTGTGGCCCTCGCTCTGCCTGCGCTTTTCAACGATGCCTCCAAGCTACCTAACTCAGAGGGGATGATGTGCCAAGAATCCTTTCACATCGGCAGCGCCTCCTTATGGAGGAGTTTCACTCGCGGGTTTCGCCATATTTTTGGCTTCTTGCTCCCTCTGGGTGCCATGATAGCCTGCTACAGCGTCACCATCGCGAGGCTGCTGCGCACTCGAGGTTTCCAGAAGCACAGGGCCATGAAGGTGATCATAGCCGTGGTGATTGCGTTTCTTCTGTGCTGGACGCCATACCACATAGTCCTGATAGTGGAAACACTCCTGAGGGCTAAGCTGATAAATTATGACTGTGCTTTGAGGAAATCAGTGGACAGGGCTTTGTATATAAGTCAAAACCTGGCTCTGTCCCACAGCTGCATCAACCCTTTCCTCTATGCCTTCGTAGGAGTGAAGTTCAGGAACAAAATGACACGACTTCTTCCGCGGAAAGCCAGACAGGAGTGGATGTCGGGGTCAAAGTTCAGCAGGTCGACATCTCAGACCTCAGAAACGAACGGAGCTGTTCTTTGAAATCGATCAATGTAGactaacattttttaaatatatatgtttatgattgtgtattttcccttttttgtttCATGCATTCTCTAATTTTGATCTGTGGTACACTGCTGCCATCTATTGGATTTACTGTTTCTCTACATCCACTATTGAAGCCTCTGATTTGATCAAatctattttcattttttctcaTTATTTCCATTTTCCTTGCTCAGGAATAGACCAGCATTATAATTCTGTAAATTaattttagtgtttttaatCTTGGAGTGCATGTATTAAATAGGTCTATACAATAGGTACCCCCAATTCAACCCTTCACTCTGACACAGCTTTTATAATCCATCTGATGTTTCCGTTTATTTAtagcctatactgtatatgctaaaaatgttttataaactGTAAATCCTGCTGTCTTCATGTTTCAGTGTTTTCAGGTTCCAACAAGTTCATCAttagcagactgatctcatatatttacgcaaagtcatgatgccatgttgtcaTTAGAAATAAAAGGCTATGCAATCTTTCTTGCACTGACTGATTTAATCTTGTAGACTTGTGGTTAGTTAATATTCACACAGGGTATTTTCtgacaaataaaataatgaacAACTCA

Function

GO: NA

KEGG:

id description
ko04670 Leukocyte transendothelial migration

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792778.1 False 1756 mRNA 0.44 2 11275005 11291114
XM_039792779.1 True 1830 mRNA 0.44 2 11288532 11291114

Neighbor

gene id symbol gene type direction distance location
LOC120554138 NA coding upstream 10828 11260429 ~ 11264177 (+)
LOC120554136 gpbar1 coding upstream 22932 11248793 ~ 11252073 (+)
LOC120554134 aamp coding upstream 31838 11232695 ~ 11243167 (+)
LOC120554128 LOC101077481,LOC103361270,LOC104935061,LOC108246803 coding upstream 183318 11049784 ~ 11091687 (+)
LOC120554118 NA coding upstream 284678 10972258 ~ 10990327 (+)
slc19a1 slc19a1 coding downstream 2573 11293687 ~ 11304333 (+)
LOC120554145 NA coding downstream 32891 11324005 ~ 11330546 (+)
LOC120554163 NA coding downstream 150696 11441810 ~ 11449836 (+)
inha NA coding downstream 164893 11456007 ~ 11458720 (+)
igfbp2a igfbp2 coding downstream 215395 11506509 ~ 11522886 (+)
G234010 NA non-coding upstream 42499 11230487 ~ 11232506 (+)
G234001 NA non-coding upstream 108981 11160996 ~ 11166024 (+)
G233994 NA non-coding upstream 133189 11121858 ~ 11141816 (+)
G233987 NA non-coding upstream 135726 11095516 ~ 11139279 (+)
G233941 NA non-coding upstream 322027 10947922 ~ 10952978 (+)
G234079 NA non-coding downstream 42164 11333278 ~ 11334092 (+)
G234081 NA non-coding downstream 46252 11337366 ~ 11337625 (+)
G234087 NA non-coding downstream 50866 11341980 ~ 11342290 (+)
G234088 NA non-coding downstream 52052 11343166 ~ 11343416 (+)
LOC120554172 NA non-coding downstream 141556 11432670 ~ 11436202 (+)
gemin8 gemin8 other upstream 225598 11046296 ~ 11049407 (+)
pln NA other upstream 684923 10579826 ~ 10590082 (+)
trnas-cga_10 NA other upstream 885950 10388974 ~ 10389055 (+)
LOC120554323 LOC104929110,LOC103356760,LOC101067516,LOC102314427,LOC102201222,LOC101482517,LOC107381121,LOC106905396,LOC103147142,LOC106529266 other upstream 1455440 9726383 ~ 9819565 (+)
prkag3a prkag3,LOC103372145,LOC104934537 other upstream 1810688 9460752 ~ 9464317 (+)
G234085 mest other downstream 71427 11362541 ~ 11380103 (+)
G234095 NA other downstream 102550 11393664 ~ 11395346 (+)
LOC120554149 erbb4,LOC102292440,LOC101467929,LOC100701577 other downstream 561275 11852389 ~ 12152440 (+)
LOC120554357 NA other downstream 1008518 12299632 ~ 12357177 (+)
LOC120554058 obsl1,LOC102777652 other downstream 1066913 12358027 ~ 12369221 (+)

Expression


Co-expression Network