LOC120554163


Basic Information

Item Value
gene id LOC120554163
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 11441810 ~ 11449836 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792852.1
TTGGGCCTCTTGGAAGGGATGTTGAGACTGGGACTGGATCCGGGGCCTTCTGCCATCTTGATTTCTCTCGAACGTCTTCACGGACTGGAGTTTTTATCTGTCTTGGCTGCAACTTGGTGTTGGATATCAGATGGACAACTCTATGATGTGGCATGTCCTGGTGTAAACAGCCAGCTGCAATGCCCTGAAGAACACGTGATTGAAGTGCTGTCAGTGCAGCATGGTGCGAAGAGCTCTGCTGACTGCACTGCCAGAAGCCAGCCTGCCGTGGTCTCAGACGAGAAGTGCATACACAAAGACATGATAGGATGGATCAAGTTCATCTGTGACAAACTGGAACAATGCCGACTGCCCAAGCCCAATAGGCAGATGTTTGTGTGCGACTATTCAGAAGATACCTTCGTTCAGATCACCTACAACTGTAACAAGAAAAGTGCTGATGTGCGTACCACTGTTGTATGTGAAGATCAAGCTGGAGTGCTAGAGTGTGAAACAGGAGTCCTTAACATCGTGAGGGCCAATTTCGGGCGTttggacatgaacacctgcacCGACACTCCTTCGGACATGACCTTCTGTGCAAGTCCCACAGCTGCGGGGAGATTGAAAacattgtgtgtattGTGTGAGGGCAAACAATCATGCGACGGTAACGCCACCTCTGCCAATCTGGGAGAACCTGCTCAGTGCGATGATCTTCCCAAGTATCTGACTGTGGATTATGTTTGTCAGTGATTGGAGATTTGCGTCTGACAACAGTGTCCCAGGGAGGAGCGGTGACGTCCTAATTGATTTCATCTAGGGCTGCGACTAACTAATTGTTTTCATGACTATTGtttcgattaatcgattggttgtctggtctataaaatgtaggaaaatggtgaaaaaattCAATCCGTGTTTCCCCAAAGTCCAGTGTACGTCCTCCggccttgttttgtccacaactctaaagatattcagttgacttgtcatagaggagagaagaaactagaaaatattcatatttgagaagctggaatcagagaatttgtacttttttaacataaagaTGACTCAAACCGaactaatcaattatcaaaatatttgGCGATTCATTTGATAGtcgacaactaatcgattcatcctTGCAGCTCTAATTTCATCCAATGTATCCATTGGTTTTATCCAAACgcatataaaaaaacaatgtgatGAGATGAATTATTAAAAGGGTACTGCTAAAGAttgtgttttggtcttttttttgtcaca
>XM_039792853.1
TTGGGCCTCTTGGAAGGGATGTTGAGACTGGGACTGGATCCGGGGCCTTCTGCCATCTTGATTTCTCTCGAACGTCTTCACGGACTGGAGTTTTTATCTGTCTTGGCTGCAACTTGGTGTTGGATATCAGATGGACAACTCTATGATGTGGCATGTCCTGGTGTAAACAGCCAGCTGCAATGCCCTGAAGAACACGTGATTGAAGTGCTGTCAGTGCAGCATGGTGCGAAGAGCTCTGCTGACTGCACTGCCAGAAGCCAGCCTGCCGTGGTCTCAGACGAGAAGTGCATACACAAAGACATGATAGGATGGATCAAGTTCATCTGTGACAAACTGGAACAATGCCGACTGCCCAAGCCCAATAGGCAGATGTTTGTGTGCGACTATTCAGAAGATACCTTCGTTCAGATCACCTACAACTGTAACAAGAAAAGTGCTGATGTGCGTACCACTGTTGTATGTGAAGATCAAGCTGGAGTGCTAGAGTGTGAAACAGGAGTCCTTAACATCGTGAGGGCCAATTTCGGGCGTttggacatgaacacctgcacCGACACTCCTTCGGACATGACCTTCTGTGCAAGTCCCACAGCTGCGGGGAGATTGAAAacattGTGTGAGGGCAAACAATCATGCGACGGTAACGCCACCTCTGCCAATCTGGGAGAACCTGCTCAGTGCGATGATCTTCCCAAGTATCTGACTGTGGATTATGTTTGTCAGTGATTGGAGATTTGCGTCTGACAACAGTGTCCCAGGGAGGAGCGGTGACGTCCTAATTGATTTCATCTAGGGCTGCGACTAACTAATTGTTTTCATGACTATTGtttcgattaatcgattggttgtctggtctataaaatgtaggaaaatggtgaaaaaattCAATCCGTGTTTCCCCAAAGTCCAGTGTACGTCCTCCggccttgttttgtccacaactctaaagatattcagttgacttgtcatagaggagagaagaaactagaaaatattcatatttgagaagctggaatcagagaatttgtacttttttaacataaagaTGACTCAAACCGaactaatcaattatcaaaatatttgGCGATTCATTTGATAGtcgacaactaatcgattcatcctTGCAGCTCTAATTTCATCCAATGTATCCATTGGTTTTATCCAAACgcatataaaaaaacaatgtgatGAGATGAATTATTAAAAGGGTACTGCTAAAGAttgtgttttggtcttttttttgtcaca
>XM_039792855.1
TCTGGAACAATCTGGTCCTTGGTGACTTTGGGCCTCTTGGAAGGGATGTTGAGACTGGGACTGGATCCGGGGCCTTCTGCCATCTTGATTTCTCTCGAACGTCTTCACGGACTGGAGTTTTTATCTGGACAACTCTATGATGTGGCATGTCCTGGTGTAAACAGCCAGCTGCAATGCCCTGAAGAACACGTGATTGAAGTGCTGTCAGTGCAGCATGGTGCGAAGAGCTCTGCTGACTGCACTGCCAGAAGCCAGCCTGCCGTGGTCTCAGACGAGAAGTGCATACACAAAGACATGATAGGATGGATCAAGTTCATCTGTGACAAACTGGAACAATGCCGACTGCCCAAGCCCAATAGGCAGATGTTTGTGTGCGACTATTCAGAAGATACCTTCGTTCAGATCACCTACAACTGTAACAAGAAAAGTGCTGATGTGCGTACCACTGTTGTATGTGAAGATCAAGCTGGAGTGCTAGAGTGTGAAACAGGAGTCCTTAACATCGTGAGGGCCAATTTCGGGCGTttggacatgaacacctgcacCGACACTCCTTCGGACATGACCTTCTGTGCAAGTCCCACAGCTGCGGGGAGATTGAAAacattgtgtgtattGTGTGAGGGCAAACAATCATGCGACGGTAACGCCACCTCTGCCAATCTGGGAGAACCTGCTCAGTGCGATGATCTTCCCAAGTATCTGACTGTGGATTATGTTTGTCAGTGATTGGAGATTTGCGTCTGACAACAGTGTCCCAGGGAGGAGCGGTGACGTCCTAATTGATTTCATCTAGGGCTGCGACTAACTAATTGTTTTCATGACTATTGtttcgattaatcgattggttgtctggtctataaaatgtaggaaaatggtgaaaaaattCAATCCGTGTTTCCCCAAAGTCCAGTGTACGTCCTCCggccttgttttgtccacaactctaaagatattcagttgacttgtcatagaggagagaagaaactagaaaatattcatatttgagaagctggaatcagagaatttgtacttttttaacataaagaTGACTCAAACCGaactaatcaattatcaaaatatttgGCGATTCATTTGATAGtcgacaactaatcgattcatcctTGCAGCTCTAATTTCATCCAATGTATCCATTGGTTTTATCCAAACgcatataaaaaaacaatgtgatGAGATGAATTATTAAAAGGGTACTGCTAAAGAttgtgttttggtcttttttttgtcaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792852.1 True 1257 mRNA 0.44 9 11441837 11449836
XM_039792853.1 False 1248 mRNA 0.44 9 11441837 11449836
XM_039792855.1 False 1251 mRNA 0.44 8 11441810 11449836

Neighbor

gene id symbol gene type direction distance location
LOC120554145 NA coding upstream 111264 11324005 ~ 11330546 (+)
slc19a1 slc19a1 coding upstream 137477 11293687 ~ 11304333 (+)
LOC120554141 NA coding upstream 150696 11275005 ~ 11291114 (+)
LOC120554138 NA coding upstream 177633 11260429 ~ 11264177 (+)
LOC120554136 gpbar1 coding upstream 189737 11248793 ~ 11252073 (+)
inha NA coding downstream 6171 11456007 ~ 11458720 (+)
igfbp2a igfbp2 coding downstream 56673 11506509 ~ 11522886 (+)
mettl21a mettl21a,LOC102786790 coding downstream 266569 11716405 ~ 11717508 (+)
LOC120554157 LOC104957756,LOC104928318,LOC101466657,LOC100697713 coding downstream 337110 11786946 ~ 11821870 (+)
si:ch211-93g23.2 NA coding downstream 383421 11833257 ~ 11837137 (+)
LOC120554172 NA non-coding upstream 5608 11432670 ~ 11436202 (+)
G234088 NA non-coding upstream 98394 11343166 ~ 11343416 (+)
G234087 NA non-coding upstream 99520 11341980 ~ 11342290 (+)
G234081 NA non-coding upstream 104185 11337366 ~ 11337625 (+)
G234079 NA non-coding upstream 107718 11333278 ~ 11334092 (+)
G234117 NA non-coding downstream 9131 11458967 ~ 11460570 (+)
G234123 NA non-coding downstream 18778 11468614 ~ 11570724 (+)
G234135 NA non-coding downstream 121172 11571008 ~ 11572562 (+)
G234137 NA non-coding downstream 124566 11574402 ~ 11577940 (+)
G234145 NA non-coding downstream 271719 11721555 ~ 11723072 (+)
G234095 NA other upstream 46464 11393664 ~ 11395346 (+)
G234085 mest other upstream 61707 11362541 ~ 11380103 (+)
gemin8 gemin8 other upstream 392403 11046296 ~ 11049407 (+)
pln NA other upstream 851728 10579826 ~ 10590082 (+)
trnas-cga_10 NA other upstream 1052755 10388974 ~ 10389055 (+)
LOC120554149 erbb4,LOC102292440,LOC101467929,LOC100701577 other downstream 402553 11852389 ~ 12152440 (+)
LOC120554357 NA other downstream 849796 12299632 ~ 12357177 (+)
LOC120554058 obsl1,LOC102777652 other downstream 908191 12358027 ~ 12369221 (+)
LOC120554049 ect2l other downstream 1336805 12786641 ~ 12797654 (+)
G234425 tsc22d1,LOC106531085,LOC102196627 other downstream 1553127 13002963 ~ 13025520 (+)

Expression


Co-expression Network