LOC120554198


Basic Information

Item Value
gene id LOC120554198
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16289101 ~ 16310011 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792928.1
tttattgTAAAAATAACCTTATTAGGACATTAACATCTAcaacatgtgtgtatgtttgtgtgtgtgtctgtttgtgtttgtgtgggtgtgtgtctgtgtgagcgtgcatgcatgtgtgtgttcaaaTGCCTTTTGTGAAGGATATCATAAGGTCTTGAGGCAATCTAatgaaaaatgccatatttatgCTACAGGGAATGTGTAAATCTGTCATTTTTGACCAATAATAATAAGCAGTAATATTATAAATCATCATGTTGTTGTTTGTTAACAATTACAATAACTTATAACTGAAGTTTAATTTCCTGTTTATCACTGCTGGTTGTTATGAAGTGTTACTGCTCCTCTGATCTCTGTTGTCAGTGTTTCTGGTTCTACAGGattctttctgtcttctcttcTGTACcccgcctcctcctcttcctcctgatgAAGCTGAAACAGGTTTGTTGTTTTGCTGTCAGAGACAAAGGTTTCAGTTGACACACGCAATAAGATGTCTTAGTGTCCCAGTCTTCCAGGTCGAGCTGCAGCATGAGAAACCCTCCAATCAGAGCAGTCAAgacCCGTCAGAGACCAGACCCTGCTGAACCtgaacctgaacccagctgtgtgtcctttaaGAGTGACCGGTCACATCAAGGCCTCATTAACTTTAAAGGAGAGCAACCTTCTGCTGAAAAGAGGATCCATCAAAGACCAGACtctgctgaacctgaacccagctgtgtgtccttcaagAGAGAACGGCTCAATGATTTTAAAGGTCAACAACCCACTGCTGAAAAGAGagtggaccaggagagATCAGAGGTTCCCAGTGGAAGTCGTTCTGGAGTTTGTAAGCGTAAACTCAAATCTAACCTAAACAAGAAGTtccattgtgtgtttgtggggattgctaaagcaggaaacccaacccttctgaatcagatgttcacagagatctacatcacaaagggagggactgcagatgtcaatgatgaacatgaggtcagacagattgaaactaggaaaccagacagaccacaaacaacaatcaaacaagaagacatctttaaaaccccacctggaagagttgaaccaatcagaacagtgatgacaaagggagtggctggcatcgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacatccagttcacatttccattcaccttcagagagctgaatatgctgaaagagaaaaggttcagcttggtggaacttgttgattacttctttagtgaaaccaaagaagcaggaatctgcaggtttgaagagttcccagttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttcctcaacactgagatcctgactgatgttacagagtccacctcagtgggtgtactgctgacaaacctcatcagggggaatctgcttccctctgctcagctctggataaccacacgacctgcagcagccaattaGATCCCTCCTGAGTttgttgacatggtgacagaggtcagagggttcactgacccacagaaggaagagtacttcaggaagaaattcagagatgaggagcaggccaacagaatcatctcccacatcaagacatcacgaagcctccacatcatgtgtcacatcccagtcttctgctggatcactgctacagttctggaggctgtgttgaagaccagagagggaggagagctgcccaagaccctgactgagatgtacatccacctcctggtggttcagtccaaaatgaagaacatcaagtatgatggaggagctgagacCGATCCACACTGGAGTGAAGAGAACTGGAAGATGATtgagtctctgggaaaacttgcttttgagcagctgcagaaaggtaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacagatctttaaagaggagagaggactgtaccaggacaaggtgtactgcttcatccatctgagtgttcaggagtttctggctgctcttcatgtccatctgacattcatCAACTCTGGATTCAACGTGCTGACAGAAGAACAAATAACCTCCCGCTCCCGGTGGTCTGAAGTGTTCAGAGACAAATCAACACGTTTCTAccacagtgctgtggacaaggccttacagagtccaaatggacacctggacttgtttctccgcttcctcctgggtctttcactgcagaccaatcagacTCTCCTACGAGGTCTGATGACGCCGACAGGAAGTAGCTCACAGACCAATCAGAAAACAGTTGAGTACATCAAGAAAACGATCAGTGAGAATCtctctgcagagagaagcatcaatctgttccactgtctgaatgaactgaattaTCGTTCTCTAGTTGAGGAGATCCAACAGGCCCTGAGATCAGGATGTCTCTCCACAAAtgaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagagaAAGATCTGgatgtgtttgacctgaagaaatactgtGCCTCAGAGGAGACTCTTCTgaagctgctgccagtggtcaaagcctccaacaaagcttTactgagtggctgtaacctgtcagagagaagctgtgaagctctgtcctcagttctcagctctcagtcctctagtctgagagagctggacctgagtaacaacaacctgcaggattcaggagggaagctgatttctgttggactgaagagtccacactgcacactggagactctcagtctgtcaggctgtctgatctcagaggaagggtgttcttctctggtctcagctctgagctccaacccctctcatctgagagagctggacctgagctacaatcatccaggagactcgGGAGTGAAGCTACTGTCAGCGGGACTGAAGGATCCTCTCTGGACATtggacactctcagggtggagcctgctggagtcagatggttgacaccaggtttgaggaagtattcctATGAACTCACACTCGACaaaaacacagtgaacagaaaactcaaactgtgtgacaacaacaggaaggtgacatttGTGATGgaggatcagccatatcctgatcatccagagaggtttgactgtcctcagctgctgtgtatagatggtctgactggtcgctgttactgggaggttgagGTGAGAGGAGTGGTTgttatatcagtgagttacagaggaatcaagAGGAGAGGATACAGTGCTGACTGTTTGTTTGGatgtaatgatcagtcctggagtttGATCTGCTCTAATGGTCATTACTCTGTCCGTCACAATAACAGAGaaacatccatctcctcctcctctgtttctggtagagtagcagtgtatgttgACTGTCCtactggctctctgtccttctacacagtctcctctgactcactgatcaacctccacaccttcaacaccacattcactcaaccTCTTTACCCTGGGTTCTGGATCTGGTCTCGTTCCTCAGTGTCTTTGTGTTCTGTGTAGGAcggagagtctcctcctgtttctcactgctgatcagttgagtctgtacaggatcacacttacagaaatatttcaggttattgttataaaccaggggtgtcaaactcaacttccca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792928.1 True 3656 mRNA 0.46 10 16289101 16310011

Neighbor

gene id symbol gene type direction distance location
LOC120553996 NA coding downstream 105208 16176729 ~ 16183893 (-)
trnat-cgu_13 NA coding downstream 320915 15968114 ~ 15968186 (-)
LOC120554208 NA coding downstream 322516 15953868 ~ 15966585 (-)
LOC120553994 NA coding downstream 384071 15885644 ~ 15905030 (-)
trnaq-cug_39 NA coding downstream 454091 15834939 ~ 15835010 (-)
LOC120554221 NA coding upstream 46811 16356822 ~ 16365361 (-)
LOC120554797 NA coding upstream 64766 16374777 ~ 16374965 (-)
LOC120554247 NA coding upstream 70301 16380312 ~ 16386295 (-)
trnat-agu_40 NA coding upstream 76761 16386772 ~ 16386845 (-)
LOC120554212 NA coding upstream 100749 16410760 ~ 16854135 (-)
G235225 NA non-coding downstream 43704 16245127 ~ 16245397 (-)
G235215 NA non-coding downstream 88510 16200332 ~ 16200591 (-)
G235208 NA non-coding downstream 156855 16131586 ~ 16132246 (-)
LOC120554279 NA non-coding downstream 297706 15973575 ~ 15991395 (-)
G235151 NA non-coding downstream 406100 15882625 ~ 15883001 (-)
G235242 NA non-coding upstream 11100 16321111 ~ 16321517 (-)
G235351 NA non-coding upstream 12877 16322888 ~ 16324236 (-)
LOC120554275 NA non-coding upstream 30786 16340797 ~ 16345265 (-)
trnat-cgu_15 NA non-coding upstream 43866 16353877 ~ 16353949 (-)
LOC120554287 NA non-coding upstream 195580 16505591 ~ 16506631 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other downstream 951 16248694 ~ 16288150 (-)
LOC120554377 LOC103355861 other downstream 1275287 14966316 ~ 15013814 (-)
G234898 NA other downstream 1439364 14847834 ~ 14849737 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 1999058 14194312 ~ 14290043 (-)
G234405 NA other downstream 3334976 12953090 ~ 12954125 (-)
LOC120554218 NA other upstream 16082 16326093 ~ 16352877 (-)
G235387 NA other upstream 301972 16611983 ~ 16616316 (-)
LOC120554263 NA other upstream 426175 16736186 ~ 16742288 (-)
trnat-cgu_19 NA other upstream 445982 16755993 ~ 16756065 (-)
G235350 NA other upstream 754291 17064302 ~ 17103517 (-)

Expression


Co-expression Network