LOC120554208


Basic Information

Item Value
gene id LOC120554208
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 15953868 ~ 15966585 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792943.1
TGTTGAGTGAGCTGGAGGAGACCGTATTGTAGTCGTAGTGCAGCTAATTCTTTCAGGTGTAATTAAACAGCAATGTCTTCTTCAGTAAGGTATTTGAGAGAGTTTGTCAACGAGCGagtaactgctgctgctgaagaaatattcagagtttaacaaagaaaaagaaaagaaaactttcGTCAGCGCAGACTGTTGGATATTGTTTGGAAACCCGAGACAAAGTTACACAGGATAGACTGGAGAGAACTTGAGGAGAACTGTGCTCAGAAGACGTTTGATTTTACGTGCATAGAGagtttggcagtttgcagaggAAAGTTCCCGAAGTCATATTAACATGGACTCGATCTACAGTGACCACACATACTCACACTGTTTCAACCATCGAGcttTACCTTCAGATGTCCACAAAGTGACTGTTGGTGAAGAACATCCACATGAGTGGAGCCCCAGTCTGGACCAGGAGGACACAAagcccccacacattaaagaagaaaaggaggaCCTCTGGATCAGTCAGGATGGAGAGCAGtatcaagggctggaggaggcagatatcaccaagttcccattcactcttCTCCATGTAAAGAGTGAAGATAATAAAGAGAAACCTCAGTTCTTacagcttcatcaaagacaaactgaagagatgaaaacagaagctgatggagaggactgtggaggatcAGAACAAGATGGAAACacgcatacatatacatatttacaaCCAGATACTAATGACAAGACCAGAGTACCTCATTCAGGTATGAACTCTCTGAATAATATTGAAGACCCTGTCAGTGATTCCAGATGTAGTGCTGGtgagaaaccatttagctgctcggAGTGTGAGAAAAGATTTGAACGCAAGGGACATCTGAAGACACACATGAGAACCCACAGAAGAGGGAAACAATTGaactgctcagtctgtaagaaagcttttaaACACCGTGGACATTTACAGCAACACATGGAAACCCACACAGGAcagaaaccatttagctgctcagtctgtaaaaaAGCTTTTACAGAGAGTGGAagtttaaataaacacatgatAATCCACAAAGGAAATAAAGCTTCATTAGAGAGTGGACATTTACACAATCACATGATAACCCACAAAGGAGATAACCCTTTCAGCTGCAGTATTTGTGATAAAATCTTCAGCAGGCCTCGTCAGCTCAGaaaacataaatgtgttggtcagATGGAAACAGAAGGTGATGGAAAgaactgtggaggaccagaaccagccaggaacacATATCCAGATTCACGTTTACAACCAGATGCTGATGACAAGACGCAACACttttctgaacctgagactgataaCAGTAACAATtcgaaggagaccagagaacctcagtcaggtttaaactctctgaataaCAATGAAGTCCCTGTCAGTGATTCCAGATGTCGTACTGGtgagaaaccatttagctgctcggAGTGTGGGAAAAGATGTGACCGCAAGATACATCTGAAGTTACACATGAGAACCCACACAAGAACTAATACAACAGTTAGCTGCTCCATCTGTAAGAAGGCTTTTACAGCCAGGGGACAATTTTACAAACACATGAGAAACCACAGAAGAGGGAAACCATTTAACTGCTCActctgtaagaaagcttttagACAGCGTGGAAATTTACAGGAACACATGAGaacccacacaggagagaaaccatttagctgctcagtctgtaaagAAGCTTTTGCAGGGCGTTACAGTTTGTATAAACACATGACAATCCACAAAGAAAAGCAATCTTTATTAGAGAGTGGACACATGAGAACCCACATAGCAGAGAACCCTTTCAGCTGCGGTAATTGTGACAAAATGTTCAACAGGCCGCGTCAGCTCAGaaaacataaatgtgttggtAAGATGGAAACTGAAGGGGAtcgagaggactgtggaggaccagaaacAACCAGGAACACATATCAAGATACACATATACAACCAAATACTGATCCcaagactggagactcttctgagactgatgacagtgagGATTGGACCGAggccagagaacctcagtcaggtgTCAACTCTCTGTGTAATGATGAAGTCCCTGTCAGTGATTCCAGATGTGGTACTGGtgagaaaccatttagctgctctgagtgcGGAAAAAGATTTGGCCGTAAGATCAATCTTAAGTTACACATGACAACCCACACAagagagaaaccatttagctgctcagtctgtatgAAAGCTTTTACAATGAGTAGAAGCTTAAAATATCACATGACAgcccacacaggagagaaaccatttagctgctcaatCTGTAAGAGAGCTTTTAAAGGGATTGGAAGTTTAGTAACTCACATTAGAACCCACACAGGAAAGAAACCATATAGCTGCTCGGTCTGTGAAAAATCTTTTACGCGGAGTGGGTATTTAAAGAGACACATACAAATGCACACCCGGGAAGGGAATCCATTTAGCTGCTTAGTCTGTAAAAAAGCTTTTACACTGAGAGGAAATTTAAAGCTGCACATGCAAATTCACACGCGGGAGGGaatccatttagctgctcactctgtatgaGAGCTTTTACAGTGCGTGGACATTAAGGAGAGAAGAGAATTGAGAATTTAGGCACCATTGTGTTCTAATCTACTATCAATCTAGGCTAAAGTCAACgatattaaaaatgtatgcatGTTTCTTCCTTTAAATTTAAGTTTGTGGTTGACTAGCAGGCCGGCTTTAGTTGTTtcataaattgattgattgtgtTTGCTGATTCGCTCTGCATGCAGAGCCTGCATGTAACACACCACCAAGTGTGTATCCATGGACACTTAAATCAGTGTAAATAACATTATATCAAGGACAGATTTATGTTGTAGATTAATGTTCCGTTTCCAGCGTCGCGGCTCAGAACTATAACGTAAGTTGTGACATATCCCTTGTTTCTTTAGGCTAACTAACATtatattagctttagcctggctggtagCAACAGTCTGGCAACTCTTCGGTGAATAATGGCCAGGAGACGTTGTGATAACGTTGCATTCaggtgatttattttgtctttttagcgaacataaaacactgactaCTGTAGGTTCACTACCCCTGGAAAAGCATCACTGTGTCTGCGGCAGCTGTCGCTTACGGTACTTTTCTACACGCGAGAGAGCCTCACTTCCCATAACAAACCCCGTAGGACTAAGGCTGAATCTCATTTCTCATCTTACCCCTTCCCCTTACCCCTACCACTTCGTCTTACGCCTAGCCCTTGTCCCTCGAAACCAAGTGGTAAGGGGTAGGGGTGAAAAAACCTCTATGAAATGAGACGCCACTTGGTTACATACATACTTAGGTCTGTTTGCAATAAATATGT
>XM_039792944.1
tgttttggggaaagggggctttgcgttctcctttgccttgttaagcttTACCTTCAGATGTCCACAAAGTGACTGTTGGTGAAGAACATCCACATGAGTGGAGCCCCAGTCTGGACCAGGAGGACACAAagcccccacacattaaagaagaaaaggaggaCCTCTGGATCAGTCAGGATGGAGAGCAGtatcaagggctggaggaggcagatatcaccaagttcccattcactcttCTCCATGTAAAGAGTGAAGATAATAAAGAGAAACCTCAGTTCTTacagcttcatcaaagacaaactgaagagatgaaaacagaagctgatggagaggactgtggaggatcAGAACAAGATGGAAACacgcatacatatacatatttacaaCCAGATACTAATGACAAGACCAGAGTACCTCATTCAGGTATGAACTCTCTGAATAATATTGAAGACCCTGTCAGTGATTCCAGATGTAGTGCTGGtgagaaaccatttagctgctcggAGTGTGAGAAAAGATTTGAACGCAAGGGACATCTGAAGACACACATGAGAACCCACAGAAGAGGGAAACAATTGaactgctcagtctgtaagaaagcttttaaACACCGTGGACATTTACAGCAACACATGGAAACCCACACAGGAcagaaaccatttagctgctcagtctgtaaaaaAGCTTTTACAGAGAGTGGAagtttaaataaacacatgatAATCCACAAAGGAAATAAAGCTTCATTAGAGAGTGGACATTTACACAATCACATGATAACCCACAAAGGAGATAACCCTTTCAGCTGCAGTATTTGTGATAAAATCTTCAGCAGGCCTCGTCAGCTCAGaaaacataaatgtgttggtcagATGGAAACAGAAGGTGATGGAAAgaactgtggaggaccagaaccagccaggaacacATATCCAGATTCACGTTTACAACCAGATGCTGATGACAAGACGCAACACttttctgaacctgagactgataaCAGTAACAATtcgaaggagaccagagaacctcagtcaggtttaaactctctgaataaCAATGAAGTCCCTGTCAGTGATTCCAGATGTCGTACTGGtgagaaaccatttagctgctcggAGTGTGGGAAAAGATGTGACCGCAAGATACATCTGAAGTTACACATGAGAACCCACACAAGAACTAATACAACAGTTAGCTGCTCCATCTGTAAGAAGGCTTTTACAGCCAGGGGACAATTTTACAAACACATGAGAAACCACAGAAGAGGGAAACCATTTAACTGCTCActctgtaagaaagcttttagACAGCGTGGAAATTTACAGGAACACATGAGaacccacacaggagagaaaccatttagctgctcagtctgtaaagAAGCTTTTGCAGGGCGTTACAGTTTGTATAAACACATGACAATCCACAAAGAAAAGCAATCTTTATTAGAGAGTGGACACATGAGAACCCACATAGCAGAGAACCCTTTCAGCTGCGGTAATTGTGACAAAATGTTCAACAGGCCGCGTCAGCTCAGaaaacataaatgtgttggtAAGATGGAAACTGAAGGGGAtcgagaggactgtggaggaccagaaacAACCAGGAACACATATCAAGATACACATATACAACCAAATACTGATCCcaagactggagactcttctgagactgatgacagtgagGATTGGACCGAggccagagaacctcagtcaggtgTCAACTCTCTGTGTAATGATGAAGTCCCTGTCAGTGATTCCAGATGTGGTACTGGtgagaaaccatttagctgctctgagtgcGGAAAAAGATTTGGCCGTAAGATCAATCTTAAGTTACACATGACAACCCACACAagagagaaaccatttagctgctcagtctgtatgAAAGCTTTTACAATGAGTAGAAGCTTAAAATATCACATGACAgcccacacaggagagaaaccatttagctgctcaatCTGTAAGAGAGCTTTTAAAGGGATTGGAAGTTTAGTAACTCACATTAGAACCCACACAGGAAAGAAACCATATAGCTGCTCGGTCTGTGAAAAATCTTTTACGCGGAGTGGGTATTTAAAGAGACACATACAAATGCACACCCGGGAAGGGAATCCATTTAGCTGCTTAGTCTGTAAAAAAGCTTTTACACTGAGAGGAAATTTAAAGCTGCACATGCAAATTCACACGCGGGAGGGaatccatttagctgctcactctgtatgaGAGCTTTTACAGTGCGTGGACATTAAGGAGAGAAGAGAATTGAGAATTTAGGCACCATTGTGTTCTAATCTACTATCAATCTAGGCTAAAGTCAACgatattaaaaatgtatgcatGTTTCTTCCTTTAAATTTAAGTTTGTGGTTGACTAGCAGGCCGGCTTTAGTTGTTtcataaattgattgattgtgtTTGCTGATTCGCTCTGCATGCAGAGCCTGCATGTAACACACCACCAAGTGTGTATCCATGGACACTTAAATCAGTGTAAATAACATTATATCAAGGACAGATTTATGTTGTAGATTAATGTTCCGTTTCCAGCGTCGCGGCTCAGAACTATAACGTAAGTTGTGACATATCCCTTGTTTCTTTAGGCTAACTAACATtatattagctttagcctggctggtagCAACAGTCTGGCAACTCTTCGGTGAATAATGGCCAGGAGACGTTGTGATAACGTTGCATTCaggtgatttattttgtctttttagcgaacataaaacactgactaCTGTAGGTTCACTACCCCTGGAAAAGCATCACTGTGTCTGCGGCAGCTGTCGCTTACGGTACTTTTCTACACGCGAGAGAGCCTCACTTCCCATAACAAACCCCGTAGGACTAAGGCTGAATCTCATTTCTCATCTTACCCCTTCCCCTTACCCCTACCACTTCGTCTTACGCCTAGCCCTTGTCCCTCGAAACCAAGTGGTAAGGGGTAGGGGTGAAAAAACCTCTATGAAATGAGACGCCACTTGGTTACATACATACTTAGGTCTGTTTGCAATAAATATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792943.1 True 3386 mRNA 0.42 3 15953868 15966585
XM_039792944.1 False 3042 mRNA 0.42 2 15953868 15962533

Neighbor

gene id symbol gene type direction distance location
LOC120553994 NA coding downstream 48838 15885644 ~ 15905030 (-)
trnaq-cug_39 NA coding downstream 118858 15834939 ~ 15835010 (-)
trnal-aag_20 NA coding downstream 119538 15834248 ~ 15834330 (-)
trnal-aag_19 NA coding downstream 136035 15817751 ~ 15817833 (-)
trnaq-uug_15 NA coding downstream 136542 15817255 ~ 15817326 (-)
trnat-cgu_13 NA coding upstream 1529 15968114 ~ 15968186 (-)
LOC120553996 NA coding upstream 210144 16176729 ~ 16183893 (-)
LOC120554198 NA coding upstream 322516 16289101 ~ 16310011 (-)
LOC120554221 NA coding upstream 390237 16356822 ~ 16365361 (-)
LOC120554797 NA coding upstream 408192 16374777 ~ 16374965 (-)
G235151 NA non-coding downstream 70867 15882625 ~ 15883001 (-)
G235075 zbed1 non-coding downstream 287986 15660293 ~ 15665882 (-)
G235053 NA non-coding downstream 396452 15556638 ~ 15557416 (-)
LOC120554274 NA non-coding downstream 468381 15482306 ~ 15485487 (-)
LOC120554277 NA non-coding downstream 524492 15428280 ~ 15429376 (-)
LOC120554279 NA non-coding upstream 6990 15973575 ~ 15991395 (-)
G235208 NA non-coding upstream 165001 16131586 ~ 16132246 (-)
G235215 NA non-coding upstream 233747 16200332 ~ 16200591 (-)
G235225 NA non-coding upstream 278542 16245127 ~ 16245397 (-)
G235242 NA non-coding upstream 354526 16321111 ~ 16321517 (-)
LOC120554377 LOC103355861 other downstream 940054 14966316 ~ 15013814 (-)
G234898 NA other downstream 1104131 14847834 ~ 14849737 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 1663825 14194312 ~ 14290043 (-)
G234405 NA other downstream 2999743 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 3660725 12278519 ~ 12293143 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 282109 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 359508 16326093 ~ 16352877 (-)
G235387 NA other upstream 645398 16611983 ~ 16616316 (-)
LOC120554263 NA other upstream 769601 16736186 ~ 16742288 (-)
trnat-cgu_19 NA other upstream 789408 16755993 ~ 16756065 (-)

Expression


Co-expression Network