LOC120554215


Basic Information

Item Value
gene id LOC120554215
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 15738442 ~ 15754859 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792961.1
CAACAAGAAAGATCTACTCAGAGAATTGCAAGAAATTTGCTTGGAAGAAGTGTCTCTGAAAAGTATTTTAGAAGTAGGATCAAGCGGGAGGGGAAAACgttgttttttcaaatttgTAATAGACACTGGGCTATATAGCCGGATATAGTGCTAATATAGTAGATTGCAGCAATGCAACTTATTGGATGCCGGCTGCCGTAAAAtcccagagaagaagaagaagatgaagaagtacaccaacaagaagaagaagaagaagacgaagaCGACGACGACCGGAAGTAGATATATTGTATTGTGGATAAGTTGTAACGTTGTTCATTTGACAATATTAACGTTATTATTTAGGTTATTTCAGGAAAAATGGGTCAGTATTGCTGCATTGTGAACTGCTACAATAGGTCTCACGATCGACAGGGCAAACGCCTGATAAATGGTATTAGTTTTCACCATTTTCCTACTTGGAAAAAGACGCAAGGAGACCTGGTGTCCGACCTCACAAAGAGGCGTCGCATGGCTTGGGTCGCCGCTGCACGGAGGAAAACCATCACCTTCGACAACATTTCCAAAGACATGCTTGTTTGCTCACGGCACTTTCACAAAGgcAAGCCAGCATATGAAATGTTTCAGTGCGACCCTGACTGGGCGCCGTCGCTACACCTTGGTCCCACAGGCGTCGGTGGCAATTCTGCCGGATGTAAGCGGAGGATTCAACGGCAGCAAGCTGCAGTTGTGTCACCCTTTGCCACACCTTCTGCCGCCACATCTGATGATGCTTGCTGTGTCGCACCTGTTGACTCATCCGATGACCCACCTGTTGACACACCCATGGCCGATGACACACCCTCTGACTCTGCAGcTTTACCTTCAGATGTCCAGATGGTGATTGTTGGTGAAGAACATCAGCACGAGTGGAGCTCCAGTCTGGACCAGGAGCACGCAAatcccccacacattaaagaggaacaggaggaactctgGACCAGTCTAGTGCGAGAGCGGTTTCAAGGGCTGGAGGTGTTCCCATACAGTCCCGTTCCTGTGaggagtgaagatgatgaagggAAACCTCAGttctcacagcttcatcaaagacaaactgAACAGATGAAAACTGAAGCTGACAGAGAGTACTGTGGaagaccagaaccagccaggaccTCAGATCCAGATTCACAATCACAACCAGATACTGATGACgggactggagactcttctgaacctgagacggatgacagtgctgattggaacgagaccagagaacctcagtcaggtttaaactctctgaataaTGATGAAGTCCTTGTCAGTGATCTGAGACGTAGTACCGGTGAGCAACGGTGTGGGAAAAGATCTGGCACCAGTAGACTTCTGAAGCGACACGGGAGATCTCATACAGGAAAGcgaccatttagctgctcagtctgtgaGAAAGATTTTAAACAGAGGGGACATTTACAGGaccacatgagaatccacaccgGAGAAAAACCATTtggctgctcagtctgtaagaaagcttttacCGTGAATGGAAATTTACAtagacacatgagaatccacacagaaAAGAAAGCTTTATTGGAGAGTGTATATCCACAGAATCACATGATGACCCACATAGGAGATAACACTTTCAGCTGCAGTATCTGTGACAGAATGTTCAACAGGCCTCGTCAGctcagaaaacacaaatgtgTTGGTCAGATGGAAACAGAAGCCGACGGAGAGGACTGTgaaggaccagaaccagccaggaacacGCATCCAGATTCACAATCGCAACCAGATACTGATGACgggactggagactcttctgaacctgagacggatgacagtgctgattggaacgagaccagagaacctcagtcaggtttaaactctctgaataaTGATGAAGTCCTTGTCAGTGATCTGAGATGTAGTACCGGTGAGCGACGGTGTGGGAAAAGATCTGGCACCAGTAGACTTCTGAAGCGACACGTGAGATCTCCTACAGGAAAGcgaccatttagctgctcagtctgtgaGAAAGATTTTATACAGAGGGGACATTTACAGGACCACATGAGaacccacacaggagaaaaaccatttggctgctcagtctgtaagaaagcttttacTGTGAATGGAAATTTACATAGGCACATGAGAATGCACACAGAAAAGAAAGCTTTATTGGAGAGTTGACCTCCACAGAAACACATGAGGACCCACATAGGAGAGAACCCTTCCAGCTGCAGTATCTGTGACCGAATCTTCAACAGGCCTCGTCGGCTCAGAAAACGTTAAAATGTGTTGgtcacatggaaacagaagccgacggagaggactgtggaggaccagaaccagccaggaacacATATCCAGATGTACATTTACAACCAGATACTGATGACGAGACTTGACACTGTTCTGAACTTGAAACTGATGACAGCAATGCTTGggaaaaactgaaaatgcaTGAA

Function

GO: NA

KEGG:

id description
ko03030 DNA replication

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792961.1 True 2471 mRNA 0.46 3 15738442 15754859

Neighbor

gene id symbol gene type direction distance location
cep70 NA coding downstream 38739 15684567 ~ 15699703 (-)
LOC120554219 NA coding downstream 60475 15672137 ~ 15677967 (-)
LOC120554239 NA coding downstream 83877 15636430 ~ 15654565 (-)
LOC120554251 NA coding downstream 104822 15623152 ~ 15633620 (-)
LOC120554257 NA coding downstream 126782 15602315 ~ 15611660 (-)
LOC120554237 NA coding upstream 12911 15767770 ~ 15781203 (-)
trnaq-uug_6 NA coding upstream 31462 15786321 ~ 15786392 (-)
trnak-cuu_17 NA coding upstream 33468 15788327 ~ 15788399 (-)
trnav-cac_14 NA coding upstream 34789 15789648 ~ 15789719 (-)
trnak-cuu_18 NA coding upstream 35357 15790216 ~ 15790288 (-)
G235075 zbed1 non-coding downstream 72560 15660293 ~ 15665882 (-)
G235053 NA non-coding downstream 181026 15556638 ~ 15557416 (-)
LOC120554274 NA non-coding downstream 252955 15482306 ~ 15485487 (-)
LOC120554277 NA non-coding downstream 309066 15428280 ~ 15429376 (-)
LOC120554282 NA non-coding downstream 369420 15368257 ~ 15369022 (-)
G235151 NA non-coding upstream 127766 15882625 ~ 15883001 (-)
LOC120554279 NA non-coding upstream 218716 15973575 ~ 15991395 (-)
G235208 NA non-coding upstream 376727 16131586 ~ 16132246 (-)
G235215 NA non-coding upstream 445473 16200332 ~ 16200591 (-)
G235225 NA non-coding upstream 490268 16245127 ~ 16245397 (-)
LOC120554377 LOC103355861 other downstream 724628 14966316 ~ 15013814 (-)
G234898 NA other downstream 888705 14847834 ~ 14849737 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 1448399 14194312 ~ 14290043 (-)
G234405 NA other downstream 2784317 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 3445299 12278519 ~ 12293143 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 493835 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 571234 16326093 ~ 16352877 (-)
G235387 NA other upstream 857124 16611983 ~ 16616316 (-)
LOC120554263 NA other upstream 981327 16736186 ~ 16742288 (-)
trnat-cgu_19 NA other upstream 1001134 16755993 ~ 16756065 (-)

Expression


Co-expression Network