LOC120554219


Basic Information

Item Value
gene id LOC120554219
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 15672137 ~ 15677967 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792966.1
AAGAGGCAGGGAACGCCTGATTGAACGCTAGAAATACAACGCAGGTAAAAAGCGATGCCTCACACCTGTGTCGTCACTTGTACACGTAGGCTATTAACGGATCTACTTCAGTCATTTCTGTTCCGGAGGACAATTCGGTGAATATTTCTGCTCGGGGGCGCTACGACAGAAAAGCATGCTTACAAAAGATGGTCTGTGACTTTTAACGGTTAACGTTACtttcccccccaccctctgGCTAACAATGGCCGCCGAGTGTACTGAAGAGGCGATTCTGGACTTTGTGAAGGAGAACGGGGGCAAAGTGAAAAACACGGACTTAATTGAGCATTTCAAAGTCGTGTTCCCGGAGGACCCGGAGAAGAAAACGGCCGCCCGCATGGCCTTTAAAAGCCACGTTGACCACATTGCGTACGTGAAAACCGAGAGCGGAGTTAAATACGTCTGTCTGAGAAAAAAGTTCCGCGGgtcagaggaggagagtggcACGGAGAGGGATTTAAACCAAGAGAGGCTCATTAAGCCGTATAATCCAGACCGAGCATGCGGCGGagacgcagcagcagcaggcgggGAGGCGCAACGGCAAACCCTACCTGGCTCAGGTTACGGAAGCGACAGCCAGGTGAGGGTTCCGCATGCTTTCTCCACTGCTAAAACCATTTCCCCGGACGAAACCGACGACAGGAGTCGGCGTCATGAGTCCGTCTGTGTAGTGGAAGAGGCGGACAGCCACTCAGGGGAGATGGGAAACCGAGGAAGCCTCCGCAGGGAGCAGAGGGAGTCCATGAAGGAGCGTGTTGGGAAAACTCCTCCTCGCATACCAGAGGTTGCAGTCACCGAGGCATCCGCTCTCCCCGCGGCAGAGGGATCGGCGTTCAACCTGCACGGGCCTGCACAAACTGGTCCCACAGGATTACCGGAGCAGGCAGCCGGACCCAGTCCCAGAGACACACCTGCCACCGAGTCGCTCTCACGAGAAGAAGCAGGGCACGTTCCAAACTCTGAAGAGGATACACCCAAACGCAGTTTGTCCGGGAGTGAAGGAAGACCCTTCCTGCAGGTCACGATGGACCGCTCCCCGCAGGTGAGGCGCAGCGGTGTGTTCCGCAGCTCAGTGTTCCGCAGCTCAGTGTTCCGCAGCTCAGCGTGGATGTCCTCCCGAAACGACAGCGATGCCGCCTCCATGGTCTCCTCCAACCCGGACGACGACAGGGCCTCGGCCACTCTGGACCCGCTGGAACACGAGTGGATGCTGTGCGCTTCGGACGGCGAGTGGGCCAGCTTGTACCAGCTCCTCGCGGCGGAGCCCAGCCTCGTCCTGCGGAAGGATTTCGTCACGGGCTTCACGTGCCTGCACTGGGCGGCCAAGCTGGGCAAGCCGGAGCTCATCGCGCTCATCGTCAACTTTGCCAAACAGCACGGCGTCCCCGCGAGCGTCGACGTCCGGTCGAGCAGCGGCTACACGCCGTTGCACGTCGCCGCCATGCACGGCCACATGGAGGTGGTGAAGCTGCTGGTGGGTGCCTACGGCGCAGACGTGGACGCCCGAGACTACAGCGGGAGGAAGGCCTGCCACTACCTCACGGACAACGTAAGCGTGGACATACGGGACATCGTCGGCGCGTACGAGCACTCCGACGCCGAGGACGAAGGCCCCAGGGACGCAGGAAGACGCTGGAGCGTCTCCAGGGTTCTCCAGTCTCACCTGAAGCCACTGGGCGACTCTGTGGACGGGGGGGTGGCCCCCAGAGAGAAACCCCTCAGGAGGAAGTCCTCGCTTTACAGGATGAAGCCCAAGCTGCAGAAGCTCCGCTCGAGGACGTCCCAAATCGTCCACAGCACATCGTTCCGGGGCACGGAGGAGCTGGACGGATCCGCGAAGGCGTCCTTTAAGTCCAGACCCAAGACGCATTTCTTCGGGTGAGATCATCATTATAGAGCTAATCGCCAGTGCCACACGGATGCAGAATTCTGccgattttttttagcagattttaaacaaaataaaaaaaaactagcagACCTGAGCAGAACAGTCTGCTGAATTCCGCAGATTTTCCGCAGAATTTTTCTGCAGATTTCAAACAATTAAACACGTTAAAGAAGTGGAAATAAAACGTCTCTTGGGCTTGTGGAGAAACTGgtcaacatttttcaccattgtctgacattttatagacctaaCATTAACATTCTAAGTCATAGAATGTTAAAAAATCAGTTTGGAGCTGGGGGTTCAACATTTTCGGGACatctattttgttgttttatagTTGGTGTGCAGGTGAAAGCTGATGGGATTATTcagtcttaaaaaaataaataaataaatcatttgaTGCCAAACAATCAGTCAAACTTTTAGAAGATCCATTCAGTCAAGATGTCTTCCTATAGACTCAGTTTTGTTAACAACTAGTcgtaataaatattttgaatgtTGTTCGGAAAAACAGAAATGTCGACAAATTTAACAAAAATCGCAAAAAACGACTAACGTTGAAATAGTTACAAGCGCCAAAAGCCTAAAAAGATCTATTgataaatttgaaaaaaagtgcaTAGCTGCCGCTGGGTAACGGCTGTGTCTTATTTCGCATACCTCCGTCAGTACACTGCTAATGTGCACCGACCATGGTTAGTATTGTCCCAAAAGGAACACTTAGGTTAAAACGCTTACCGGAAATGACAtgtcaaaatctgacaaatctaTTAAACTTTTGTCgatcaaaaaaacagacagattcagcaactgtatggcccACTTCTGGTTTAAAATGTTaacagaaacacgtttcggtgaactatttacgtaaaatacgagatcgtattctgagcGAGCCGCCATTCTGCGCTGTCGTGATATCCGGGAGAAGCCACACCCACGTGaggcgttcgtccaatcagctgccggtcgacGTCCCcggtccctcccctttccgctTTGTAGTCAAGATGGCGCACGTTTAGTGCGCGTAGTGTCCATCGTTCCCACACTGAgctttttgaccgtttttagggggtcagccgggtactttcagtgcactgactttttgcgttatctacactatatacttaaaactaagtgttttgaagtgtgcaagtaggcaGTTTGAGACACCGCCTTAGTCTACACCTACACTAATACGTTTTTAAAAACGCATATCTTTTGCTACGGAGCCCCTAAAACGAAGACGAGGagtaattttattttacagcaCTGTTCGTTCATCCATTCATACACTATTTTGAGTATGAACAGCCTTTTTAATTTGGCCAGAAATGATTAACGGCACACTTTAAACTGCTAATTACCGATGTGTTTGAGGTCAAAACAATGTCCCAATTCGTACTCTGTGTCTTTGCTCCCAAttctttttaaaatcaatataaTGCCTAtcaaaaatgttaatttaaaacattattggGCTCCAATTTATTATattcattttaactttaaagTTTTTCGTTTCAAAAACACACCTCGCGTCCTTACTACTCCGGCGCTTCGGATGCCCCTTAAACGAAGGCGTTTGGAAAACAGTGCTGCCCCCGTTTCGGTTCTTAAACTCCGGAGTTGTGTTTTAGTGTGGACGGGCAGAAACGGAGAGATTTGAAAATGTTGCCAACCcgttttttaatttgaaaaccCTGGAGTTGTGTTTCAGTCCGGACGGTCAAAGGCAGAGACCTTTTTGATAAAGGACGACGCGGACGCCCTCGTTCGCTTCCTGATTGGGTTTTATAAATCCTGTTGTGCCCTGCCCTGATTTGTCACAACCCCATCAGGTGACCCTTTTCTGAAAGAACAAACCGCAGCCTCGACTATCTGTGGTTACTCTAACATGGCTAACAAGCTACAACCGTTTTCACGCACGTTGGTATGGATGAAGATTAGTTGAAACGGTGCTAAAATGCTTGtgagattgtttttattttattaaaagccGTTTAAAAACGAAAATGCTTGTATGTAGCCTAAGTTAGAGAGGCACGAGCATAGGCggtgatttatgttttcctccgtgggtacACGTGCAcgcccttttaaaaaaaaaaaagtagtcaaaaaatgtttgcatttcagaaccttaggaaatggacagcggccgacacgaacacacacgcgcCCATTAACTGGATAATAAAGCCGTGAAGTggtctttcaactcaggacagcgccacttctcagaAATACAGacaggattggagatgagaagtgtAACTGCGATCGGATAGGAGGGCGGGGGGGTCACCAAAGAGGCGTTTTCATCcgagagacgctgtgattggtggataggctatagggttgggcgatgtcccctaaattgccagttgacgatgtttacagtaaaacatcctGATGGACGATGTTATCGTCGTCGGGGGGTTaagcactttttattttactatatctctttaaatacattttttttctactactatgAGCTAACAGTTTGACCAGACATACATTgcaatgccctctgtaaatggacAGTATTACATGGCTATGCTGCCGCCTGCTGGTAGGGGCAGCAATTACAATTTGACCTACTTTTACGGCGCCGTAAAGTCTAgactcaatcagatgtccgtgatctgcgtaacgacagtacagtggaaCGTTTGGCTTTAACAGAGCGAGAGGAACAACCTAATATACCATCGTTACTGagattaaactacattctcggttacgtttgcactgaataacgcattcaataaaccgAAACCTAACTGTtacagcgcacatgaacagatgcgcaatataaGCTCACacaaatagca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792966.1 True 4791 mRNA 0.49 2 15672137 15677967

Neighbor

gene id symbol gene type direction distance location
LOC120554239 NA coding downstream 17572 15636430 ~ 15654565 (-)
LOC120554251 NA coding downstream 38517 15623152 ~ 15633620 (-)
LOC120554257 NA coding downstream 60477 15602315 ~ 15611660 (-)
LOC120553991 NA coding downstream 573497 15092204 ~ 15098640 (-)
gucy1b2 LOC103355875 coding downstream 708166 14935720 ~ 14963971 (-)
cep70 NA coding upstream 6600 15684567 ~ 15699703 (-)
LOC120554215 NA coding upstream 60475 15738442 ~ 15754859 (-)
LOC120554237 NA coding upstream 89803 15767770 ~ 15781203 (-)
trnaq-uug_6 NA coding upstream 108354 15786321 ~ 15786392 (-)
trnak-cuu_17 NA coding upstream 110360 15788327 ~ 15788399 (-)
G235075 zbed1 non-coding downstream 6255 15660293 ~ 15665882 (-)
G235053 NA non-coding downstream 114721 15556638 ~ 15557416 (-)
LOC120554274 NA non-coding downstream 186650 15482306 ~ 15485487 (-)
LOC120554277 NA non-coding downstream 242761 15428280 ~ 15429376 (-)
LOC120554282 NA non-coding downstream 303115 15368257 ~ 15369022 (-)
G235151 NA non-coding upstream 204658 15882625 ~ 15883001 (-)
LOC120554279 NA non-coding upstream 295608 15973575 ~ 15991395 (-)
G235208 NA non-coding upstream 453619 16131586 ~ 16132246 (-)
G235215 NA non-coding upstream 522365 16200332 ~ 16200591 (-)
G235225 NA non-coding upstream 567160 16245127 ~ 16245397 (-)
LOC120554377 LOC103355861 other downstream 658323 14966316 ~ 15013814 (-)
G234898 NA other downstream 822400 14847834 ~ 14849737 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 1382094 14194312 ~ 14290043 (-)
G234405 NA other downstream 2718012 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 3378994 12278519 ~ 12293143 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 570727 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 648126 16326093 ~ 16352877 (-)
G235387 NA other upstream 934016 16611983 ~ 16616316 (-)
LOC120554263 NA other upstream 1058219 16736186 ~ 16742288 (-)
trnat-cgu_19 NA other upstream 1078026 16755993 ~ 16756065 (-)

Expression


Co-expression Network