LOC120554221


Basic Information

Item Value
gene id LOC120554221
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16356822 ~ 16365361 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792971.1
TGAACATTGTGGTCAACTTTGAGAAAGTGTCCTTTGTCAGTACAAAGCTCTCCTCTTGGTTCATCGAACATTACAGGTCTTACCAAGTAACTGACAGCAGTACAGACATTGAAATCCTGGATCCAGAGGCTTTGAATGATTACCACCCTTTGGCTGCATACCCAGTTGCTGGAAAGTTAATGGTGACCCCCAGGATGTGCCTGCTGCATTGACAAAATGGCTTTGTTACTGCGAGTACACATAAATCCTAAACTTATCCGGAAAGTCCAGCTGACGAAGACCCCTGAATCTTTGGAGGAACTAAAAGATGTACTACGAGAAAAACTTGAACTTGACGGTGAATTTGCTGTACAGTATGAAGACCCAGATTTTGGGAACGCAGTGTGTAACCTGATGGACATTGCAGAGTTGCCACCAGAAAAGGCTGTCTTGCACATTATTTGGAATATTGATGAATCGCAAACACCATCCCATTCATCCTCCATCTCTTCCCTTGATACAGCCAGCATCAGTTCACCAGCCTCCTCCCACAGCTCATCTTCAATTATTCGCACCTTCATGCGAAACATTTCAGAGTGGCCTTCTCCGTTTGTGGTCCCCTCTTTCTCATATGATGTGGAGTTAAAGCTCCGTAAGGGCAATGACATTTATGAAAAAACTGGGCAAGGTCTAAGTGTAACGAGAGACATGAAAATGGAAATTCTAGACAAGCTGGCACAAGAAATATTTGCTCTGAAAGCCTACCCTGAGAAATATCAAATAGTATCGGTTGCCTCTGAACTTGTCAACAAACATCCGTGCCTTAAGGAGCCTGGTAGCGGCACAGGATACGATGGTTGGACAACAAGCATCAAGTACAAGCTTGGAAACTACCGTTCTAAACTGCGCCAGGCTGGATGTAATGAGGTCAGTGTAAACCGAAAAAGAGGGAGGGATGACGAAGTTGATGAGGGTAGGTTTTCCTTGAAAAAACCAAAGCGAGGTGAAGTCAATCATGTTCCTGATCATCCAGAAAACTACAATGATGAGACACTAGAAGACCAGAGATGTGTCCTGGTGGGTGAAATGAAAAAGAAGGGGAAAGACATGGAAGTAATCAGACAGAAGATGGACCTCACATTCTCCCTTAGGAGAAAGGAAATCGTGGAGGTGGAGCCCATGGTCTTGGAAATCCAGGAGAGATGGCCTGCTCTTTTTCTGAGAGAACAGATTTGTGAGGAGTTCTACCGTGTCACTACTAAAGACCTGTTGGGGACCTTTAGAGCAGCCTTAGATGAGTACTGTCCTAGACTGCTTAAGCTGTACCGTGCCAGGAGGGGAGCCTGTGGTCAACACATGGAAAATCTCTTGGATAGGCTTGATGAACAGACATCTGATATTGCACTGCATCGAAAGAAAACTTGTCTTGAAGGTCTACCCATATTTGTCCGTGACACAGCAGAGAAGCTCTTCCTGAAATGCCTGGACACGGATGCAGTAGATGGGCAGACCAGAGGTGTCAAGATGGGTATCCTGACTGTTTTCGTAGATGATGCACCTACCTTGCAGCCCACAGTCAACAGTATTGACATTGTGTTGGAGGAGGCCATTGTCCTCACAGATCTTCCAGACCTCCCCACTGCATTTGCCTACCTTTTCGGCCTGCTCTATGCCTTGAACATGGAGTTTCCAAAAGAACTCAAGTACACTTTTGAAGCTATTCAGCACATCTTCATGGAACTTTCTGCCAGTTGCTCACAGCGTGTCAGGAGCTTGAAAACCAAGCTCTTACTGTAAGTTGTTGTCATTATGGCTGGCCTAATCGGCCTTAGAGACCTTTCAAAAACTTTGTTTTAGAGTTGCCCACATGTTTGCACTGTTATTGTCAGGGTTTTTTGAGATGTTGGCCTGCCTGTTTTGTGATCACTCAAAGAGAAGTACAGTTATGAAGTTGAGTAACATGTTGTTGAGGCAGAGTAAGCAAGCCTATTTTAAATTGCCCAAATTACATTTGCACCGCAGTTGTGATCCCTCAGTGAGAAGTACAGGTGTTGGAAGAGACTGTTGTCTTGCCAATGTTtcttgtgtatatactgtataacttGTTTTAAAAGTGAAATAACATGCTTATGAGGCATAGTAAGTAAGCctatcttaaaggaacacgccgacttattgggaatttagcttattcaccgta
>XM_039792972.1
ATTTGTTTATAtctaaatgctttttttctaaCTGCAGTTGTCCTGCATGCTGCTCTGTGGTCAGTCCCCACCGAGAAGGTTTACTAAGGTTCTACCAACCACAACCCTCTATTGTTCGCTTGAGTTATCCTATGAAGTGTGGGTTCTGCGGTTTTCTGAGCTCAAGTCAAGAAGATCTATTGAGGCACCATAGACTACGACACAGAAGAGGATCTCACTGGCCCTGTATCtacagtgactgtgtgtgtaccttCAAAACACCTGGCGCGTTAAAATCCCACCTTACCAGATCACATTGCAGGACTGTAAGAAGGCAGGTGACATCTTCTTTTTTCTGCTTTGTTACTGCGAGTACACATAAATCCTAAACTTATCCGGAAAGTCCAGCTGACGAAGACCCCTGAATCTTTGGAGGAACTAAAAGATGTACTACGAGAAAAACTTGAACTTGACGGTGAATTTGCTGTACAGTATGAAGACCCAGATTTTGGGAACGCAGTGTGTAACCTGATGGACATTGCAGAGTTGCCACCAGAAAAGGCTGTCTTGCACATTATTTGGAATATTGATGAATCGCAAACACCATCCCATTCATCCTCCATCTCTTCCCTTGATACAGCCAGCATCAGTTCACCAGCCTCCTCCCACAGCTCATCTTCAATTATTCGCACCTTCATGCGAAACATTTCAGAGTGGCCTTCTCCGTTTGTGGTCCCCTCTTTCTCATATGATGTGGAGTTAAAGCTCCGTAAGGGCAATGACATTTATGAAAAAACTGGGCAAGGTCTAAGTGTAACGAGAGACATGAAAATGGAAATTCTAGACAAGCTGGCACAAGAAATATTTGCTCTGAAAGCCTACCCTGAGAAATATCAAATAGTATCGGTTGCCTCTGAACTTGTCAACAAACATCCGTGCCTTAAGGAGCCTGGTAGCGGCACAGGATACGATGGTTGGACAACAAGCATCAAGTACAAGCTTGGAAACTACCGTTCTAAACTGCGCCAGGCTGGATGTAATGAGGTCAGTGTAAACCGAAAAAGAGGGAGGGATGACGAAGTTGATGAGGGTAGGTTTTCCTTGAAAAAACCAAAGCGAGGTGAAGTCAATCATGTTCCTGATCATCCAGAAAACTACAATGATGAGACACTAGAAGACCAGAGATGTGTCCTGGTGGGTGAAATGAAAAAGAAGGGGAAAGACATGGAAGTAATCAGACAGAAGATGGACCTCACATTCTCCCTTAGGAGAAAGGAAATCGTGGAGGTGGAGCCCATGGTCTTGGAAATCCAGGAGAGATGGCCTGCTCTTTTTCTGAGAGAACAGATTTGTGAGGAGTTCTACCGTGTCACTACTAAAGACCTGTTGGGGACCTTTAGAGCAGCCTTAGATGAGTACTGTCCTAGACTGCTTAAGCTGTACCGTGCCAGGAGGGGAGCCTGTGGTCAACACATGGAAAATCTCTTGGATAGGCTTGATGAACAGACATCTGATATTGCACTGCATCGAAAGAAAACTTGTCTTGAAGGTCTACCCATATTTGTCCGTGACACAGCAGAGAAGCTCTTCCTGAAATGCCTGGACACGGATGCAGTAGATGGGCAGACCAGAGGTGTCAAGATGGGTATCCTGACTGTTTTCGTAGATGATGCACCTACCTTGCAGCCCACAGTCAACAGTATTGACATTGTGTTGGAGGAGGCCATTGTCCTCACAGATCTTCCAGACCTCCCCACTGCATTTGCCTACCTTTTCGGCCTGCTCTATGCCTTGAACATGGAGTTTCCAAAAGAACTCAAGTACACTTTTGAAGCTATTCAGCACATCTTCATGGAACTTTCTGCCAGTTGCTCACAGCGTGTCAGGAGCTTGAAAACCAAGCTCTTACTGTAAGTTGTTGTCATTATGGCTGGCCTAATCGGCCTTAGAGACCTTTCAAAAACTTTGTTTTAGAGTTGCCCACATGTTTGCACTGTTATTGTCAGGGTTTTTTGAGATGTTGGCCTGCCTGTTTTGTGATCACTCAAAGAGAAGTACAGTTATGAAGTTGAGTAACATGTTGTTGAGGCAGAGTAAGCAAGCCTATTTTAAATTGCCCAAATTACATTTGCACCGCAGTTGTGATCCCTCAGTGAGAAGTACAGGTGTTGGAAGAGACTGTTGTCTTGCCAATGTTtcttgtgtatatactgtataacttGTTTTAAAAGTGAAATAACATGCTTATGAGGCATAGTAAGTAAGCctatcttaaaggaacacgccgacttattgggaatttagcttattcaccgta
>XM_039792973.1
TTTACTAAGGTTCTACCAACCACAACCCTCTATTGTTCGCTTGAGGTAGTTATCCTATGAAGTGTGGGTTCTGCGGTTTTCTGAGCTCAAGTCAAGAAGATCTATTGAGGCACCATAGACTACGACACAGAAGAGGATCTCACTGGCCCTGTATCtacagtgactgtgtgtgtaccttCAAAACACCTGGCGCGTTAAAATCCCACCTTACCAGATCACATTGCAGGACTGTAAGAAGGCAGGTGACATCTTCTTTTTTCTGCTTTGTTACTGCGAGTACACATAAATCCTAAACTTATCCGGAAAGTCCAGCTGACGAAGACCCCTGAATCTTTGGAGGAACTAAAAGATGTACTACGAGAAAAACTTGAACTTGACGGTGAATTTGCTGTACAGTATGAAGACCCAGATTTTGGGAACGCAGTGTGTAACCTGATGGACATTGCAGAGTTGCCACCAGAAAAGGCTGTCTTGCACATTATTTGGAATATTGATGAATCGCAAACACCATCCCATTCATCCTCCATCTCTTCCCTTGATACAGCCAGCATCAGTTCACCAGCCTCCTCCCACAGCTCATCTTCAATTATTCGCACCTTCATGCGAAACATTTCAGAGTGGCCTTCTCCGTTTGTGGTCCCCTCTTTCTCATATGATGTGGAGTTAAAGCTCCGTAAGGGCAATGACATTTATGAAAAAACTGGGCAAGGTCTAAGTGTAACGAGAGACATGAAAATGGAAATTCTAGACAAGCTGGCACAAGAAATATTTGCTCTGAAAGCCTACCCTGAGAAATATCAAATAGTATCGGTTGCCTCTGAACTTGTCAACAAACATCCGTGCCTTAAGGAGCCTGGTAGCGGCACAGGATACGATGGTTGGACAACAAGCATCAAGTACAAGCTTGGAAACTACCGTTCTAAACTGCGCCAGGCTGGATGTAATGAGGTCAGTGTAAACCGAAAAAGAGGGAGGGATGACGAAGTTGATGAGGGTAGGTTTTCCTTGAAAAAACCAAAGCGAGGTGAAGTCAATCATGTTCCTGATCATCCAGAAAACTACAATGATGAGACACTAGAAGACCAGAGATGTGTCCTGGTGGGTGAAATGAAAAAGAAGGGGAAAGACATGGAAGTAATCAGACAGAAGATGGACCTCACATTCTCCCTTAGGAGAAAGGAAATCGTGGAGGTGGAGCCCATGGTCTTGGAAATCCAGGAGAGATGGCCTGCTCTTTTTCTGAGAGAACAGATTTGTGAGGAGTTCTACCGTGTCACTACTAAAGACCTGTTGGGGACCTTTAGAGCAGCCTTAGATGAGTACTGTCCTAGACTGCTTAAGCTGTACCGTGCCAGGAGGGGAGCCTGTGGTCAACACATGGAAAATCTCTTGGATAGGCTTGATGAACAGACATCTGATATTGCACTGCATCGAAAGAAAACTTGTCTTGAAGGTCTACCCATATTTGTCCGTGACACAGCAGAGAAGCTCTTCCTGAAATGCCTGGACACGGATGCAGTAGATGGGCAGACCAGAGGTGTCAAGATGGGTATCCTGACTGTTTTCGTAGATGATGCACCTACCTTGCAGCCCACAGTCAACAGTATTGACATTGTGTTGGAGGAGGCCATTGTCCTCACAGATCTTCCAGACCTCCCCACTGCATTTGCCTACCTTTTCGGCCTGCTCTATGCCTTGAACATGGAGTTTCCAAAAGAACTCAAGTACACTTTTGAAGCTATTCAGCACATCTTCATGGAACTTTCTGCCAGTTGCTCACAGCGTGTCAGGAGCTTGAAAACCAAGCTCTTACTGTAAGTTGTTGTCATTATGGCTGGCCTAATCGGCCTTAGAGACCTTTCAAAAACTTTGTTTTAGAGTTGCCCACATGTTTGCACTGTTATTGTCAGGGTTTTTTGAGATGTTGGCCTGCCTGTTTTGTGATCACTCAAAGAGAAGTACAGTTATGAAGTTGAGTAACATGTTGTTGAGGCAGAGTAAGCAAGCCTATTTTAAATTGCCCAAATTACATTTGCACCGCAGTTGTGATCCCTCAGTGAGAAGTACAGGTGTTGGAAGAGACTGTTGTCTTGCCAATGTTtcttgtgtatatactgtataacttGTTTTAAAAGTGAAATAACATGCTTATGAGGCATAGTAAGTAAGCctatcttaaaggaacacgccgacttattgggaatttagcttattcaccgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792971.1 False 2179 mRNA 0.44 5 16356822 16362213
XM_039792972.1 True 2296 mRNA 0.44 6 16356822 16365361
XM_039792973.1 False 2221 mRNA 0.44 6 16356822 16365282

Neighbor

gene id symbol gene type direction distance location
LOC120554198 NA coding downstream 46811 16289101 ~ 16310011 (-)
LOC120553996 NA coding downstream 172929 16176729 ~ 16183893 (-)
trnat-cgu_13 NA coding downstream 388636 15968114 ~ 15968186 (-)
LOC120554208 NA coding downstream 390237 15953868 ~ 15966585 (-)
LOC120553994 NA coding downstream 451792 15885644 ~ 15905030 (-)
LOC120554797 NA coding upstream 9416 16374777 ~ 16374965 (-)
LOC120554247 NA coding upstream 14951 16380312 ~ 16386295 (-)
trnat-agu_40 NA coding upstream 21411 16386772 ~ 16386845 (-)
LOC120554212 NA coding upstream 45399 16410760 ~ 16854135 (-)
trnat-agu_41 NA coding upstream 91027 16456388 ~ 16456461 (-)
trnat-cgu_15 NA non-coding downstream 2873 16353877 ~ 16353949 (-)
LOC120554275 NA non-coding downstream 11557 16340797 ~ 16345265 (-)
G235351 NA non-coding downstream 32586 16322888 ~ 16324236 (-)
G235242 NA non-coding downstream 35305 16321111 ~ 16321517 (-)
G235225 NA non-coding downstream 111425 16245127 ~ 16245397 (-)
LOC120554287 NA non-coding upstream 140230 16505591 ~ 16506631 (-)
LOC120554273 NA non-coding upstream 197443 16562804 ~ 16567091 (-)
G235357 NA non-coding upstream 316366 16681727 ~ 16711192 (-)
G235413 NA non-coding upstream 401305 16766666 ~ 16775545 (-)
G235427 NA non-coding upstream 508474 16873835 ~ 16876854 (-)
LOC120554218 NA other downstream 3945 16326093 ~ 16352877 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other downstream 68672 16248694 ~ 16288150 (-)
LOC120554377 LOC103355861 other downstream 1343008 14966316 ~ 15013814 (-)
G234898 NA other downstream 1507085 14847834 ~ 14849737 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 2066779 14194312 ~ 14290043 (-)
G235387 NA other upstream 246622 16611983 ~ 16616316 (-)
LOC120554263 NA other upstream 370825 16736186 ~ 16742288 (-)
trnat-cgu_19 NA other upstream 390632 16755993 ~ 16756065 (-)
G235350 NA other upstream 698941 17064302 ~ 17103517 (-)
s100b LOC103360204,LOC104927403 other upstream 1369370 17734731 ~ 17745257 (-)

Expression


Co-expression Network