LOC120554223


Basic Information

Item Value
gene id LOC120554223
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16531962 ~ 16556455 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792975.1
TCCGCCATTAaatcaaagaagaagaagaagaagaagaagacgacagTTCATATTTTTCCGACCTAGCTAAATATGTCAATGAGCTAAACACCGGAGGGAAGCAGTTAGCTGAATCCAAACGACGGCAGTAAAACCCCCGAGGAGTTAGTTTGTTACTCTGAGATGGACCGACGCCGGAAACAGAAGCTGCGAGGAGAAGctATACCATCAGATGTCCAGAAAGTGATTGTTGGTGAAGAACATCACCAGGAGTGGAGCTCCAGTCTGGACCAGGAGGATACAAAGCCCCCACACATTAacgaggaacaggaggaactgccGATCAGGCAGGGCgaagagcagcttcaagggcccGAGGAGGCAGATATCACCAAGTTCTATGTTCCaatgaagagtgaagatgaagAAGAGAACTCTCGGTTCTCACAActtcatcaaagacaaactgaagagatgaaaacagaagctgatggagaagACAGTGGAGGatcagaaccagccaggaactcagaTCCAGATACACATTTACAACCAGATACTGATGAcaagactggagactcttctgaatcTAAGACTTATGACAGTAATTGTTGGAAGGAGACCAGGGAATCCCAGTCAGGTTTAAAGTCTCTGAATAATGTTGAAGTCCCTGTCAGTGATGTGAGATGTAGTACTGAGTGTGGGCAAAGGTTTGGCACCAGTGGACATCGGAAGAGACAAATGAGATCTCATACAGGaaagaaaccatttagctgctcagtgTGTAAGAAAGCGTTTACAGTGAGTGGAAGTTTACAaacacacatgagaatccacacaggagagaaaccgtttagctgctcagtctgtaagatgGCTTTTACAGTGAGTGGACATTTACAtagacacatgagaatccatacaggagagaagccatttAGCTGCTCCTTCTGTAACAAAGCTTTTATACAGGGTGAcaatttacagaaacacatgagagtccatacaggagaaaaaccatttagctgctcagtctgtaagaaagcttttacacagagtggaaatttacagaaacacatgaaaatacacacaggagaaaaaccatTTACCTGCTCTgtctgtaagaaagcttttacagCGAGTGGATGTTTACAtagacacatgagaatccacacaggagaaaaaccatttagctgctccgTCTGTAAAAAAGCTTTTGCAGTAAGTGGAagtttacagaaacacatgagaatccacacaggagagaagccatttagctgctctgtctgtaagaaagcttttacagAGAGTGGACATTTACAGACGCACATGAGaacccacacaggagagaaaccgttTAGTTGCTCCgtctgtaagaaagcttttacagAGAGTGGACATTTACAGAatcacatgagaatccacacaggagaaaaaccatttagctgctcagtctgtaagaaagcttttacagagagtggaagtttacagaaacacatgagaatccacacaggagagaaaccatttagttgctcagtctgtaagaaagcttttacGGAGCGTGGAAGTTTACGGatacacatgagaatccacacaggagaaaaacgaTTTAGTTGTgcagtctgtaagaaagcttATACAGACAGTGGAAGTTTACGTAAACACATGAGAACCCTAACGCATGTTAGAAACCATTTAGCTGTGTGAAGTGGAGCTGCCATCTGAATGGAGCAGAGAACCTTGATCTAACATGTTAACACTAACAAATGAATGAAATCTCTAAAAGTTATGAGATGTCATACTCTGTGGGTCCTTTTTTTAGTCTAAAATCCAAATGCTACAACGTTAgactttaaaatgtcttaattaTGATTTTGACAGGTCGTAAAAACTAATTGGATTATGAAGGTATGTGACTGTTGATATCCATGGAACTCCAAATATTAACACATTTTTCTAACTTATATTAGACTTGTTTGTAGGTAACAGCCACCCAACTCGGTCTCCCTTAAGGCCCAGACAGACCGACCAGAcagccgaccctcggcagaaaaggcagttgggaGTGATCAGTCTCCCAGAGTTGAAAAATCCccaaaagtgcctcggaacacccCAAAGCGACAAGATGTAATACATCTCCTTAACAGCAGgaggcgctaatctgtattgtcgcccaaaaaatgaaaaccggcagctgattggacgaacacgtcaAGTAGGTCTGGTTTCtgcggaaattcaaagacacggtcatggcggcttgttcagaatatgatctcatattgtactaaaatagttcaccgaaatgtgtttctgaaaacattttaagcgagaaataggccatgtagttgctgaatctgtcttcatttcagatcgacaaaggtcagtttaaaagattttcgtcagattttgagagactctagttaCGCTCATTCAGCTCCCCgattccgggttagcactctaccaatcagatgggtcattttaGTCCGACTGCCAGCAGTGCCCACCCCTCATGTCAAATGGGCCAAAACGAAGGACGACGGCCCCTCCGAGGGACACTGCACGGAATGcaccgaacagacttgagtcactgacctcgccagactgtctgacgGCTGATTATCGACTCGGTGTGTCTGGACCTTTAAGTGTGAAGTGCTGTGATCTCACCAACCCTTATAAAAGTACCAACTGCTATTGTTCTTGACTCTTCTCTACTACAGAATGAGCAACAACTCTACTGCATCTCTCAGCAGGGGGTCCAGATCAGCTCAAGTAGCCCAACGCAGAAATTCCACAATTCTCCCAGCCTGGCTTTCCCAAAACAATGGAACTGCCGCGCTAATAAAGGATTTATTTCTGTAGTAATGTACATGTATTGAATTTGATTTCATCCAacttttattgtttaaatttttCTTGTGGTGcgtatgatgggcttatggtgttgtcattcaTACATGTTTTTTTGGGTCTATGGTTTATCGACTATTTTGTTACTATTCTGTTGAATGACCTGGAATATTGTAGTTAGTgcgtcatcttttcttgatatttttttttttgtttgtcggTGTGGCTGGTGATGACTGAAGGGGGTGGGGAGGAGATTTTTTCATGTTgcgagtttttatttttttattttgttaaaggaaaaattgttaatcacaaaaaagaaGTGGAGGTGCTCTAGAGTTTGCACATCTTTgagttttcaacattttattatAACAAATTCTGTATGCATACTTTGCATTGATCCAGTAGCATAAAAATATaaacgcacacatacatactgtatatatatatacacattcatAGTCTTCATAAGAAATCCACCAGCCAAGCATATTTTTAACTAGCCATTGCTTTTTTGAgtcacatatactgtacattttgttcAGTAGACAATGTACTTCACTATATCAACTTCACATCAAAAAGTAGAAAGGACTGTAAACATGCTCAGTGTCCTCAGACCGTCTTGAGTGTGTAATAACTGGTGTGCATGTCTTCACTGAATATGTAAAATGAATGCCATAATTAAATACCATTATTAAATGTAATAACAGTAATGTCA
>XM_039792976.1
TCCGCCATTAaatcaaagaagaagaagaagaagaagaagacgacagTTCATATTTTTCCGACCTAGCTAAATATGTCAATGAGCTAAACACCGGAGGGAAGCAGTTAGCTGAATCCAAACGACGGCAGTAAAACCCCCGAGGAGTTAGTTTGTTACTCTGAGATGGACCGACGCCGGAAACAGAAGCTGCGAGGAGAAGctATACCATCAGATGTCCAGAAAGTGATTGTTGGTGAAGAACATCACCAGGAGTGGAGCTCCAGTCTGGACCAGGAGGATACAAAGCCCCCACACATTAacgaggaacaggaggaactgccGATCAGGCAGGGCgaagagcagcttcaagggcccGAGGAGGCAGATATCACCAAGTTCTATGTTCCaatgaagagtgaagatgaagAAGAGAACTCTCGGTTCTCACAActtcatcaaagacaaactgaagagatgaaaacagaagctgatggagaagACAGTGGAGGatcagaaccagccaggaactcagaTCCAGATACACATTTACAACCAGATACTGATGAcaagactggagactcttctgaatcTAAGACTTATGACAGTAATTGTTGGAAGGAGACCAGGGAATCCCAGTCAGGTTTAAAGTCTCTGAATAATGTTGAAGTCCCTGTCAGTGATGTGAGATGTAGTACTGAGTGTGGGCAAAGGTTTGGCACCAGTGGACATCGGAAGAGACAAATGAGATCTCATACAGGaaagaaaccatttagctgctcagtgTGTAAGAAAGCGTTTACAACTTGTTTGTAGGTAACAGCCACCCAACTCGGTCTCCCTTAAGGCCCAGACAGACCGACCAGAcagccgaccctcggcagaaaaggcagttgggaGTGATCAGTCTCCCAGAGTTGAAAAATCCccaaaagtgcctcggaacacccCAAAGCGACAAGATGTAATACATCTCCTTAACAGCAGgaggcgctaatctgtattgtcgcccaaaaaatgaaaaccggcagctgattggacgaacacgtcaAGTAGGTCTGGTTTCtgcggaaattcaaagacacggtcatggcggcttgttcagaatatgatctcatattgtactaaaatagttcaccgaaatgtgtttctgaaaacattttaagcgagaaataggccatgtagttgctgaatctgtcttcatttcagatcgacaaaggtcagtttaaaagattttcgtcagattttgagagactctagttaCGCTCATTCAGCTCCCCgattccgggttagcactctaccaatcagatgggtcattttaGTCCGACTGCCAGCAGTGCCCACCCCTCATGTCAAATGGGCCAAAACGAAGGACGACGGCCCCTCCGAGGGACACTGCACGGAATGcaccgaacagacttgagtcactgacctcgccagactgtctgacgGCTGATTATCGACTCGGTGTGTCTGGACCTTTAAGTGTGAAGTGCTGTGATCTCACCAACCCTTATAAAAGTACCAACTGCTATTGTTCTTGACTCTTCTCTACTACAGAATGAGCAACAACTCTACTGCATCTCTCAGCAGGGGGTCCAGATCAGCTCAAGTAGCCCAACGCAGAAATTCCACAATTCTCCCAGCCTGGCTTTCCCAAAACAATGGAACTGCCGCGCTAATAAAGGATTTATTTCTGTAGTAATGTACATGTATTGAATTTGATTTCATCCAacttttattgtttaaatttttCTTGTGGTGcgtatgatgggcttatggtgttgtcattcaTACATGTTTTTTTGGGTCTATGGTTTATCGACTATTTTGTTACTATTCTGTTGAATGACCTGGAATATTGTAGTTAGTgcgtcatcttttcttgatatttttttttttgtttgtcggTGTGGCTGGTGATGACTGAAGGGGGTGGGGAGGAGATTTTTTCATGTTgcgagtttttatttttttattttgttaaaggaaaaattgttaatcacaaaaaagaaGTGGAGGTGCTCTAGAGTTTGCACATCTTTgagttttcaacattttattatAACAAATTCTGTATGCATACTTTGCATTGATCCAGTAGCATAAAAATATaaacgcacacatacatactgtatatatatatacacattcatAGTCTTCATAAGAAATCCACCAGCCAAGCATATTTTTAACTAGCCATTGCTTTTTTGAgtcacatatactgtacattttgttcAGTAGACAATGTACTTCACTATATCAACTTCACATCAAAAAGTAGAAAGGACTGTAAACATGCTCAGTGTCCTCAGACCGTCTTGAGTGTGTAATAACTGGTGTGCATGTCTTCACTGAATATGTAAAATGAATGCCATAATTAAATACCATTATTAAATGTAATAACAGTAATGTCA
>XM_039792978.1
TCCGCCATTAaatcaaagaagaagaagaagaagaagaagacgacagTTCATATTTTTCCGACCTAGCTAAATATGTCAATGAGCTAAACACCGGAGGGAAGCAGTTAGCTGAATCCAAACGACGGCAGTAAAACCCCCGAGGAGTTAGTTTGTTACTCTGAGATGGACCGACGCCGGAAACAGAAGCTGCGAGGAGAAGctATACCATCAGATGTCCAGAAAGTGATTGTTGGTGAAGAACATCACCAGGAGTGGAGCTCCAGTCTGGACCAGGAGGATACAAAGCCCCCACACATTAacgaggaacaggaggaactgccGATCAGGCAGGGCgaagagcagcttcaagggcccGAGGAGGCAGATATCACCAAGTTCTATGTTCCaatgaagagtgaagatgaagAAGAGAACTCTCGGTTCTCACAActtcatcaaagacaaactgaagagatgaaaacagaagctgatggagaagACAGTGGAGGatcagaaccagccaggaactcagaTCCAGATACACATTTACAACCAGATACTGATGAcaagactggagactcttctgaatcTAAGACTTATGACAGTAATTGTTGGAAGGAGACCAGGGAATCCCAGTCAGACTTGTTTGTAGGTAACAGCCACCCAACTCGGTCTCCCTTAAGGCCCAGACAGACCGACCAGAcagccgaccctcggcagaaaaggcagttgggaGTGATCAGTCTCCCAGAGTTGAAAAATCCccaaaagtgcctcggaacacccCAAAGCGACAAGATGTAATACATCTCCTTAACAGCAGgaggcgctaatctgtattgtcgcccaaaaaatgaaaaccggcagctgattggacgaacacgtcaAGTAGGTCTGGTTTCtgcggaaattcaaagacacggtcatggcggcttgttcagaatatgatctcatattgtactaaaatagttcaccgaaatgtgtttctgaaaacattttaagcgagaaataggccatgtagttgctgaatctgtcttcatttcagatcgacaaaggtcagtttaaaagattttcgtcagattttgagagactctagttaCGCTCATTCAGCTCCCCgattccgggttagcactctaccaatcagatgggtcattttaGTCCGACTGCCAGCAGTGCCCACCCCTCATGTCAAATGGGCCAAAACGAAGGACGACGGCCCCTCCGAGGGACACTGCACGGAATGcaccgaacagacttgagtcactgacctcgccagactgtctgacgGCTGATTATCGACTCGGTGTGTCTGGACCTTTAAGTGTGAAGTGCTGTGATCTCACCAACCCTTATAAAAGTACCAACTGCTATTGTTCTTGACTCTTCTCTACTACAGAATGAGCAACAACTCTACTGCATCTCTCAGCAGGGGGTCCAGATCAGCTCAAGTAGCCCAACGCAGAAATTCCACAATTCTCCCAGCCTGGCTTTCCCAAAACAATGGAACTGCCGCGCTAATAAAGGATTTATTTCTGTAGTAATGTACATGTATTGAATTTGATTTCATCCAacttttattgtttaaatttttCTTGTGGTGcgtatgatgggcttatggtgttgtcattcaTACATGTTTTTTTGGGTCTATGGTTTATCGACTATTTTGTTACTATTCTGTTGAATGACCTGGAATATTGTAGTTAGTgcgtcatcttttcttgatatttttttttttgtttgtcggTGTGGCTGGTGATGACTGAAGGGGGTGGGGAGGAGATTTTTTCATGTTgcgagtttttatttttttattttgttaaaggaaaaattgttaatcacaaaaaagaaGTGGAGGTGCTCTAGAGTTTGCACATCTTTgagttttcaacattttattatAACAAATTCTGTATGCATACTTTGCATTGATCCAGTAGCATAAAAATATaaacgcacacatacatactgtatatatatatacacattcatAGTCTTCATAAGAAATCCACCAGCCAAGCATATTTTTAACTAGCCATTGCTTTTTTGAgtcacatatactgtacattttgttcAGTAGACAATGTACTTCACTATATCAACTTCACATCAAAAAGTAGAAAGGACTGTAAACATGCTCAGTGTCCTCAGACCGTCTTGAGTGTGTAATAACTGGTGTGCATGTCTTCACTGAATATGTAAAATGAATGCCATAATTAAATACCATTATTAAATGTAATAACAGTAATGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792975.1 True 3562 mRNA 0.41 2 16531962 16556455
XM_039792976.1 False 2393 mRNA 0.42 3 16531962 16556455
XM_039792978.1 False 2232 mRNA 0.42 3 16531962 16556455

Neighbor

gene id symbol gene type direction distance location
trnat-cgu_16 NA coding downstream 27032 16504858 ~ 16504930 (-)
trnam-cau_66 NA coding downstream 31432 16500458 ~ 16500530 (-)
trnat-agu_41 NA coding downstream 75501 16456388 ~ 16456461 (-)
trnat-agu_40 NA coding downstream 145117 16386772 ~ 16386845 (-)
LOC120554247 NA coding downstream 145667 16380312 ~ 16386295 (-)
LOC120554206 NA coding upstream 60248 16616703 ~ 16638195 (-)
trnat-agu_55 NA coding upstream 171979 16728434 ~ 16728507 (-)
trnat-ugu_45 NA coding upstream 307422 16863877 ~ 16863949 (-)
trnat-agu_60 NA coding upstream 307978 16864433 ~ 16864506 (-)
trnat-cgu_22 NA coding upstream 315401 16871856 ~ 16871928 (-)
LOC120554287 NA non-coding downstream 25331 16505591 ~ 16506631 (-)
trnat-cgu_15 NA non-coding downstream 178013 16353877 ~ 16353949 (-)
LOC120554275 NA non-coding downstream 186697 16340797 ~ 16345265 (-)
G235351 NA non-coding downstream 207726 16322888 ~ 16324236 (-)
G235242 NA non-coding downstream 210445 16321111 ~ 16321517 (-)
LOC120554273 NA non-coding upstream 6349 16562804 ~ 16567091 (-)
G235357 NA non-coding upstream 125272 16681727 ~ 16711192 (-)
G235413 NA non-coding upstream 210211 16766666 ~ 16775545 (-)
G235427 NA non-coding upstream 317380 16873835 ~ 16876854 (-)
LOC120554268 NA non-coding upstream 319554 16876009 ~ 16916699 (-)
LOC120554218 NA other downstream 179085 16326093 ~ 16352877 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other downstream 243812 16248694 ~ 16288150 (-)
LOC120554377 LOC103355861 other downstream 1518148 14966316 ~ 15013814 (-)
G234898 NA other downstream 1682225 14847834 ~ 14849737 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 2241919 14194312 ~ 14290043 (-)
G235387 NA other upstream 55528 16611983 ~ 16616316 (-)
LOC120554263 NA other upstream 179731 16736186 ~ 16742288 (-)
trnat-cgu_19 NA other upstream 199538 16755993 ~ 16756065 (-)
G235350 NA other upstream 507847 17064302 ~ 17103517 (-)
s100b LOC103360204,LOC104927403 other upstream 1178276 17734731 ~ 17745257 (-)

Expression


Co-expression Network