LOC120554229


Basic Information

Item Value
gene id LOC120554229
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17289184 ~ 17306938 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792988.1
tttgaaagccgGGAGGGGATGTAGCGGacgttgtgtatgtgtttccgAGTCTCATGCGACCGACGCTTTCCGACGCAACACGGTTAGCATAGCAATGCGTTTGACGGCGTTAGCTGACCGTAAATAAGGAGTAAGAAGTTTAATTTAGTCTCTTTTGACTATCCGAGGTAGATGCCCAGATTCTAGCATCTGAAGAAGCAGCGGAGGGAAGCAGAATGACGAAGCCCCGAAAAAAGCCGTGCCCCTCCTGTCGGGCCCCAAATTCCCTTGGGAGGATGACGTGTGTGGAGTGTGTCTGCCCCCTGCAATTTAATGAAGGATTAAAAAAGAAGCAAGCCAAGCTGAACCACTGTAGCTGGGCATCCACTGTCAAGTCTAACAGGAACTCCAGCAGGAGCGTTAGGTCGGCCCAGCTATCTGTTTTTAAACTCAGTGCCCTTGGCTGCTGCCCGATTCTTTTTCTCGGGCGTCAGGACCGCAAGGGGGAGATTTGCGGGGACATAGTCCACCACATCCCTCTGACTGATGGGGTGGTCCAGGAGATAGTGAAGGAGATGAGGAGACTCTATGAGCACCTCCTGAAAAGTTTACCTATGGATGTCCAGAAAGTGATCGTTGGTGAAGAACATCAGCAGGAGTGGGGCTCCAGTCTGGACCAGAAGGACACAAAGCCCCCAcgcattaaagaggaacaggaggaactccggaccagtcaggagggagagcagcttcaagggctggaggaggctgatatcaccaagttcccattcactctggtccctgtgaagagtgaagatgatgaagagaaacCTCCAttctcacagcttcatcaaagacCAACTGAAGAGAtgaaaacagaagctgatggagagggcTGCACAAAACCAGCTATTAACTCGGATCCAGATTTGCATTCAAAACCTGATGACGAGACCGGAGCcccttctgaacctgagactgatgatagtgctgattggaaggagaccagagaacctcagtcaggtttaaactctctgaatggTAACGAAGACTATGGCAGTGATCTGAGATTTAGTACTGGTGGGAGtgagtgtgggaaaagatttggcCCCAGTGGACACCTGAATTCTCATGCAGGAGAGAAACCATTCAGCTGCTCCGTCTGTAAGAGAGGTTTTGTAAAAAGTGGAAGTTTACATgtacacatgagaatccacacgggagagaaaccatttagctgctccgTCTGTAAGAAAGCGTTTACAGGAAGTGGAAGTTTACATgtacacatgagaatccacacgggagagaaaccatttagctgctccgtctgtaagaaatcttttagagagagaggaagtttacagagacacatgagaatccacacaggagagaaaccattcAGCTGTTCTGTCTGTAAACGAGCTTTTATAGAGAGCGGTAATCTTAataaacacatgagaatccactcaggtgagaaaccatttagctgcaCAGTCTGTAAGAAAACTTTTAGAGAGAGAAGAAGTTTACAGAAACACACGAGAgcccacacaggagagagaccaTTCAGCCATCTGGGGTGGAGCTCCAGTCTGGAAGGAGAGCAGATAACCTCAGTCAGGTTGAAACCCTCTGAAAATAATTGCATTATTTAAAAGTGATATGAGATGCAATACTCTGTGGGTCCTTTTTAAAAGTCCTACGATAATGAATAATTATCAAGAAATTGATCAGATTATGAACGTAATGTAAATCCACGGAATTCCAAAGAttaatttgttaatttttttttatttaaagtgtgcTTGTTTTCAAAATGGAACAAACAGCCAATTTATTTGACCCAATCCCTCTCCTAAATGGCAGCTGTTCTGTAGCCACAAGGAACAGCCACCCAACTCAGTCTCCCAGCAGACTCCCCGTCTTCATGACTAAATTTGAAGTGCTGTGACGTCACCAGCCCTCTAAAGGCAACAACTGCCGTCGTGCTTGGCTATTCCTGCACTCCAGATATTCTTCTCTAGCAGATGACACAAGTGCCTGCTTACAGTAAACCAGTTATCATCGCTGACTTGGGCAAAATCCACCAGCTAGCCCGAAACAGCTGAAGAACGAAAGCAGTTAGCACCAAGATAATTACTGGGACTGAAGCAAACCGCATCATTCAGCCTGCAGGATTGGTATGCAGCACAACAGAGACTGCATCGCTTGACTTCAGAACCACAGTTCTCCCAGCCTGGCTTTCCCACCGTGATGGCACTGATGGCTAACAAGGATTTCTTTCTGTGGTAATGTGACCAACTGGGCCAGCGTTAACATAGCGACCGCAGCTAAGCAAAGCCGTTAACTGTTTAGCTTCTTTTAATGTATATGTAGTGATTTGATTTAATGCTAACCAGacctatatttttgtaatgttCTTTTAGTGAAGTTATTGGATAGGCCAAACTGCTAAGTTGATGTTAGTTTAGGCTTTGATACAAAATCTAGCATGTAACTAACACCCTCTTTCTAAACCTGGtaccttaaaggtgcagtaggtaagccttataaaaccacctttctgtcatatttacataccctatgttccagtagaactacatgaagcaggtcatttcctctggcaccacctacaggctgtagtgcgatttgcaaaaatccaccgctccctgttaagacgcaccaatcagggccagggggcgTGTTCAACTGCATGTcagtcactgctcatgcacacgcattcattttcccttgtggggggaggggctaagaagttgtcgatgttcacatttgttggctaagtcctggatcttcgcaatcctacctacggcacctttaacgTACACAgattgattttaacattcatccagacacacacacacacactttgatagTAGGCAAACCTTTGATTTGACTCTGACGTAGGTCAATGCTGTGAGGAGACCCAAGTCTGCCTTTATTTGTTCTCTGTCCGGGCAAACCGATGTGGCCTTAACAAAGCGGAGTTAGCAACCCTTATAGCTGCACGGCTTCCCGGGAAGACCGCCTACTTGTTTCCTCGCAAATAGCTCTTTGATGCTCGgtcctcggggcagaaataagagcttttgAGACGGCCTGGCTCAGCTCCAGCTAaactgcagactgatctcacgAAGTGGCGTacgtatgacacgccaattcgtatgtcATTTGTGGCGcattatcaagacgcatactcgctttttagcgtgtttatcaacaccgtttggcctccattgacttacgtTACCTTGTGATTCCGTGTGAATTGacaccgtagcgagtagtatgaaaaggcacgtagggaggttggaccgagggggtcaaacacagatgggtcaaacacaggactttcacccaggagactggggatcgacccgtcgctttcttcttttcctaaacccaactggttcttcttttcctaaacccaacccacgTGTCAcgttttctaaacccaaccgtagctttcTCTTCTAGAAGTGATAACTTCAAATTGTTTCCGTTAACATTCCTCACATCTAATAGTGCTCACAGCAGAAGTTTGGGTATAAAGTCATATGTTGCGGGGGGGGCGGTCACAAATACATGCCGTAATAAGTCACCAGTAAACCCCTGCCATCACCGAATGTTCTGTATTCATCAGGAGCATCACCAAAGTCCGGCCCCAGCGCAACTCACTCTGCATTAACACTCATGTGAGCGACCTGCGGACACGGTTTGGatctaaatgtaaatggactgtttttatatagcgcttttctagtcttaacaactactcaaagcgctttaacatagtac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792988.1 True 3801 mRNA 0.46 4 17289184 17306938

Neighbor

gene id symbol gene type direction distance location
LOC120554211 NA coding upstream 20887 17221309 ~ 17268297 (+)
LOC120553999 NA coding upstream 110371 17169385 ~ 17178813 (+)
LOC120554254 NA coding upstream 164278 17113416 ~ 17124906 (+)
trnat-cgu_30 NA coding upstream 183971 17105141 ~ 17105213 (+)
trnat-agu_66 NA coding upstream 184543 17104568 ~ 17104641 (+)
LOC120554209 NA coding downstream 33109 17340047 ~ 17343029 (+)
LOC120554248 LOC103366962 coding downstream 50509 17357447 ~ 17364065 (+)
LOC120554200 sh3bp4,LOC103360214 coding downstream 468594 17775532 ~ 17807753 (+)
LOC120554264 LOC103360215,LOC103389527,LOC101479567,LOC101064475 coding downstream 528956 17835894 ~ 17836902 (+)
LOC120554001 LOC103375332 coding downstream 881712 18188650 ~ 18238425 (+)
LOC120554285 NA non-coding upstream 84516 17183355 ~ 17204668 (+)
LOC120554286 NA non-coding upstream 142692 17133116 ~ 17146492 (+)
G235332 NA non-coding upstream 353518 16934799 ~ 16935666 (+)
G235321 NA non-coding upstream 448355 16840186 ~ 16840829 (+)
G235284 NA non-coding upstream 694335 16594198 ~ 16594849 (+)
G235497 NA non-coding downstream 6071 17313009 ~ 17313865 (+)
G235501 NA non-coding downstream 38527 17345465 ~ 17345923 (+)
G235530 NA non-coding downstream 42927 17349865 ~ 17350086 (+)
G235547 NA non-coding downstream 73967 17380905 ~ 17381200 (+)
G235548 NA non-coding downstream 75917 17382855 ~ 17383085 (+)
trnat-cgu_25 NA other upstream 337415 16951697 ~ 16951769 (+)
trnat-agu_63 NA other upstream 338690 16950421 ~ 16950494 (+)
LOC120554243 NA other upstream 356578 16880639 ~ 16932606 (+)
trnat-cgu_21 NA other upstream 526576 16762536 ~ 16762608 (+)
trnat-agu_56 NA other upstream 527612 16761499 ~ 16761572 (+)
als2b NA other downstream 575527 17882465 ~ 17938311 (+)
LOC120554216 mpp4 other downstream 646201 17953139 ~ 17966226 (+)
G235775 NA other downstream 860348 18167286 ~ 18171954 (+)
G235778 NA other downstream 869887 18176825 ~ 18181812 (+)
anos1a LOC103358938 other downstream 2364934 19671872 ~ 19698895 (+)

Expression


Co-expression Network