LOC120554231


Basic Information

Item Value
gene id LOC120554231
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17143971 ~ 17160195 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792990.1
GCCATTGAGGCTTCAGCCTGCAGACAACCATGAAGGCAACTCTTCTTATCCTCCtgttgTTTAGCGCCTGCAAGACGTCTGACCACCATCAAGtcTCTGTGACCCTCACTCATAACAGGTCTCAGTATTTCGAGTATGAGAAAATGTCGGTGGGCTGTGGTAAATGGACGGCGTGGAGATACACAACAGACGGCCTGAAGCTGTCCCAGTGTGCACTGGGCTGGGGAGACCAGGTTTCCTCGAACTGCGACATGAAAGCGGTCAAACTGTCCGACAGCGGGGTGTACTGGTGTGAATCTAAACACGGAGACAGCAGCCACACTGTCAACATCACCATAACTGgtggaccagTGATCCTTGAGAGTCCTTTCCTCCCTGTGGCCGAGGGAGAAGACGTCCCTCTGCACTGTAAAACAAAGACGTCCTCCAACCTGCCCGCTGAGTTCTATAAAGATGGCCACCTCATCAGGACAGGGACGAATGGCAGTTTGACCATTGGCAATTTTTCCAAGACTGATGAAGGTGCCTACAAATGTAAAGTAGGTGATCGAGAGTCTCCACTCAGCTGGCTGCTGACGAAAGATGATTCTGCGCCTGCCTCGCTCACAGCGTCCCCCGACTCGTCTCAGCTGTTTGAGTACAAGAAACTGTCTCTGAACTGTGGGGACAACAGCAGCTCTCATGGGTGGAAGATCTTCAGGGCCACAAACTTCAATGCCAAGTCTGTCGGAAAGATGTCCAGCTGCGGTGAGGACTGGGGGGTCCCTACCTCCTTTGGCTGTGAGCTCAACGCCGCCAAGCAGGATGACAGCGCAATCTACTGGTGCGAGTCTCCTGGGAGGCAGCGGAGCAACTCTCTCAACATCGGTTTTCACGATAAACCGGTAATCCTGCAGAGTCCCGTcctccctgtgatggagggaCAGGAAGTCACTCTGTACTGCATAACAAAGCAATCCTCCAACCTCTCCGCCGatttctataaagatggctcGCACATCAGGACTGAGCCTGGAGGTCGCATGACCATCCGCCATGTAAATACGACTGATGAAGGCCTCTACAAGTGTCACATCAGCGGGGTTGGAGACTCTTCACCCAGCTGGCTGTTTGTCAGAGCTACATATAGCAATACTACCAAGCCTTCACCCCCTGCACCCTCCCAGCTAGTGCTGAGTTTGATTCGCCATCTGGTGGTGGCCTGTCCATACTGCATCGCCACCGTCCTCTACATATGGCTGTCTACATGTGGACATAGGCCCAAAGGTCACTCTGCAGGAAGGAAACCGCTCGTTTCCATGGAGATGTGTCCACCCAGCAAGGACGATGAGGCACGGGGCCGAGAGGACGATGTCGTCATTGCTGACGTCACCACCGAGCATCATTtctaaactctctctctctctctctctctctctcttatgttGTTTCTTTCTGACTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792990.1 True 1443 mRNA 0.53 9 17143971 17160195

Neighbor

gene id symbol gene type direction distance location
LOC120554233 NA coding downstream 117240 17016204 ~ 17026731 (-)
trnat-agu_62 NA coding downstream 235553 16908345 ~ 16908418 (-)
trnat-cgu_24 NA coding downstream 236149 16907750 ~ 16907822 (-)
trnat-cgu_23 NA coding downstream 236486 16907413 ~ 16907485 (-)
LOC120553998 NA coding downstream 239442 16885309 ~ 16904529 (-)
LOC120554205 NA coding upstream 25192 17185387 ~ 17208313 (-)
LOC120554225 NA coding upstream 57996 17218191 ~ 17234702 (-)
LOC120554244 NA coding upstream 118159 17278354 ~ 17285312 (-)
LOC120554214 LOC103374344,LOC101068604 coding upstream 230442 17390637 ~ 17432254 (-)
nab1b nab1,LOC102789507 coding upstream 280201 17440396 ~ 17473159 (-)
LOC120554268 NA non-coding downstream 227272 16876009 ~ 16916699 (-)
G235427 NA non-coding downstream 267117 16873835 ~ 16876854 (-)
G235413 NA non-coding downstream 368426 16766666 ~ 16775545 (-)
G235357 NA non-coding downstream 432779 16681727 ~ 16711192 (-)
LOC120554273 NA non-coding downstream 576880 16562804 ~ 16567091 (-)
G235471 NA non-coding upstream 15427 17175622 ~ 17175960 (-)
G235512 NA non-coding upstream 106065 17266260 ~ 17330177 (-)
G235542 NA non-coding upstream 205005 17365200 ~ 17365435 (-)
G235571 NA non-coding upstream 251791 17411986 ~ 17413880 (-)
G235635 NA non-coding upstream 352422 17512617 ~ 17544436 (-)
G235350 NA other downstream 40454 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 387906 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 401683 16736186 ~ 16742288 (-)
G235387 NA other downstream 527655 16611983 ~ 16616316 (-)
LOC120554218 NA other downstream 791094 16326093 ~ 16352877 (-)
s100b LOC103360204,LOC104927403 other upstream 574536 17734731 ~ 17745257 (-)
LOC120554370 LOC103370263 other upstream 1110883 18271078 ~ 18327103 (-)
LOC120554371 mbd5,LOC102784158 other upstream 1244031 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 2363309 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 2571124 19731319 ~ 19732537 (-)

Expression


Co-expression Network