LOC120554233


Basic Information

Item Value
gene id LOC120554233
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17016204 ~ 17026731 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792991.1
AGGAGTATTAGTCTGCTACTCAGACATGGACCGACACCGGAAACAGCTGGAGGTGGTTTTAAAACCGGAGACGAAGCCGCGAGGAGAAGCTTTACCTTCAGATGTCCAGAAAGTGATTGTTGGTGAAGAACATCAGCAGGAGCGGAGCTCCAGTCTGGACCAGGATGAGCCAGagcccccacacattaaagaggaacaggaggaactccGGATCAGTCAGGATgaagagcagcttcaagggctggaggaggctgatatcaccaagttcacattcactcctgtccctgtgaagagtgaagatgacgAAGAGAAACCTGAGTTCTCTGAGCTTCATCAAAGACAATCTATAGAGATGAAAACGgtagctgatggagaggactgtggaggaccagaaccagccatgAACTCAGATCCAGATACACATTCACAACCAGATACTGATGACGAgacttctgaacctgagactgatgacagtgaatggaaggagaccagagaacctcagtcaggttTAGACTCTCTGAATAATGAGGAAGTCCCTGTCTGTGATTCAAGACGTGGTACTGGtgagaaaccatttagctgctcagtctgtaagaaagctttttCAGTGAGTAGAAATTTACATAGACACATGAGAACCCATACAGGAGAGAGACCgtttagctgctcagtctgtcaGAAAGCTTTTACAGTGAGAGGAAACTTAAAGACACACATGAGaacccacacaggagagaaaccatttagctgctcagtctgtcaGAAACCTTTTACAATGAGTGAAAATTTACAggcacacatgagaatccacactgGAGAGAGGCCATTTAGCTGCTCACTCTGTAATAAAGCTTTTATACAGAATGgacatttacagaaacacatgaggagccacacaggagagagaccatttagctgctcagtctgtaagaacgCTTTTACAGACCGTgcacatttacaaagacacatgagaatccacacaggagagaaaccatttagctgctcggTCTGTGAGAAAGCTTTTACAATGAGGGAAATGTTACAcgcacacatgagaatccacactgGAGAGAGGCCATTTAGTTGCTCAGTCTGTGAGAAAGCttttacagagagaggacaTTTAAAGGCACACATGAGAGTCCATGCTGGAGAGAAACCATTTATCTGCCCATTCTGTGAGAAAGCTTTTACAGTGAGTGGACATTTACAGCAACACAtaagaatccacacaggagagaaaccatttagctgctcggtctgtaagaaagcttttacagTGAGTAGAACTTTACATAGACACATGAGAACCCACACAGAGGGGAGAGACAATTTAGCTGTGTGAAGTGGAGCTGTAGTCTGTAAGGAGagcagagaacctcagtcaagTCTCTAAACATGGTATACAATGTAATACTATGGGTCcataaaaagtttaaaataaaatgtctttaaatATGATTTTGGAAGGTGTTTAAAATGTATTGGATTATGAAGTTAATGTGTCTGTTGGTATTCCATGAACTGGACTTCTTAGGAAATGCAAGAGCCAATCTATGCAACCCCAGCTCTCTTCAAAATGGAACTGCCACCCAACTCTGTCTCCCTTAAGTGTTCCCTTAAGTGAAGTGCTGTGACACCATCCCTATAAAACACGCTATTTTAtataggcagtatcggagcctaaaacgctggtatctgtatcgggaagtactgatCCGAtgccacgtaataaagccctaaagaaaatctacgttaaagtagtttatttttgttctttttccgtcAAACTGCATAATAAAAAGTTCTGGGGccttca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792991.1 True 1819 mRNA 0.43 2 17016204 17026731

Neighbor

gene id symbol gene type direction distance location
trnat-agu_62 NA coding downstream 107786 16908345 ~ 16908418 (-)
trnat-cgu_24 NA coding downstream 108382 16907750 ~ 16907822 (-)
trnat-cgu_23 NA coding downstream 108719 16907413 ~ 16907485 (-)
LOC120553998 NA coding downstream 111675 16885309 ~ 16904529 (-)
trnat-agu_61 NA coding downstream 143090 16873041 ~ 16873114 (-)
LOC120554231 NA coding upstream 117240 17143971 ~ 17160195 (-)
LOC120554205 NA coding upstream 158656 17185387 ~ 17208313 (-)
LOC120554225 NA coding upstream 191460 17218191 ~ 17234702 (-)
LOC120554244 NA coding upstream 251623 17278354 ~ 17285312 (-)
LOC120554214 LOC103374344,LOC101068604 coding upstream 363906 17390637 ~ 17432254 (-)
LOC120554268 NA non-coding downstream 99505 16876009 ~ 16916699 (-)
G235427 NA non-coding downstream 139350 16873835 ~ 16876854 (-)
G235413 NA non-coding downstream 240659 16766666 ~ 16775545 (-)
G235357 NA non-coding downstream 305012 16681727 ~ 16711192 (-)
LOC120554273 NA non-coding downstream 449113 16562804 ~ 16567091 (-)
G235471 NA non-coding upstream 148891 17175622 ~ 17175960 (-)
G235512 NA non-coding upstream 239529 17266260 ~ 17330177 (-)
G235542 NA non-coding upstream 338469 17365200 ~ 17365435 (-)
G235571 NA non-coding upstream 385255 17411986 ~ 17413880 (-)
G235635 NA non-coding upstream 485886 17512617 ~ 17544436 (-)
trnat-cgu_19 NA other downstream 260139 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 273916 16736186 ~ 16742288 (-)
G235387 NA other downstream 399888 16611983 ~ 16616316 (-)
LOC120554218 NA other downstream 663327 16326093 ~ 16352877 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other downstream 728054 16248694 ~ 16288150 (-)
G235350 NA other upstream 37571 17064302 ~ 17103517 (-)
s100b LOC103360204,LOC104927403 other upstream 708000 17734731 ~ 17745257 (-)
LOC120554370 LOC103370263 other upstream 1244347 18271078 ~ 18327103 (-)
LOC120554371 mbd5,LOC102784158 other upstream 1377495 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 2496773 19523504 ~ 19529242 (-)

Expression


Co-expression Network