LOC120554236


Basic Information

Item Value
gene id LOC120554236
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17057688 ~ 17099481 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793007.1
GGGTCCCGGAAGACCCTACGACCTCCGTCCCATTGTTTGCATTTTAGCTCGTGTTGAGGACGGCGGAGTAAAAGGCGCCAGTGTTTGGTGTCCTTCCAGAGAGAAACATCCCAAACTGCTGCATGAGGTTTTAAAACCAGAAACGGAGCTACAAAGAGCAgGTCGGGGAGAAGTTGAGGAGAGACACTTCAACATGGACTCTGAGAGGAAACTGTCTGCTGGCCAGTGGAGAGCTTTACCTTCAGATGTCCAGAAAGTGATTGTTGGTGAAGAACATCAGCAGGAGTGGAGCTCCAGTCTGGACCAGGAGGACACAAAGCCCCCCcagattaaagaggaacaggaggaacttcGGATCAGTCAGGATgaagagcagcttcaagggctggaggaggctgatgtcaccaagttcccattcactcctgtccctgtgaagagtgaagatgatgaagagaaacctatgttctcacagcttcatcaaagacaaactgaagagataaaaacagaagctgatggacaGGACTGTgaaggaccagaaccagccatgAAATCAGATCCAGATACACATTCAGAACCAGATACTGATGAcgagactggagactcttctgaacctgagactgatgacagtgctgattggaaggagaccagagaacctcagtcaggtttaaactctctgaataaTGATATATTCCCTGTTAGTGATTCAAGATGTACTACTGGTGAGAAACCATTTAGGTGCTCGAAGTATGGGAAAAGATTTGGCACCAATAGAAATGTGACGAGGCACATGAGATCTcatacaggagagaaaccatttatCTGCCCAGTTtgtaagaaagcttttacagAGAGTGGAAATTTAAagagacacatgagaatccacacaggagagaaatcatttagctgcttaatctgtaagaAAGATTTTACAGCGCGTCTAAATTTACATGGACACATGAGaacccacacaggagagaaaccatttagctgctcagtctgtaagaaagcttttacagAGAGTGGAAATTTAAagagacacatgagaatccacacaggagagaaaccatttagctgctcagtctgtaagaaagatTTTGCACAGAGTGGAAACTTACAGATGCACATGAAAATCCACTCtggagagaaaccatttagctgctcagtctgtaagaaagatTTTTCATGGAGTGGAAGTTTACAGGAACATATGAGAATCCACTCAGGAGAGAAATCATTTAGCTGCTCAATCTGTAAGAAAGATTTTACAGCGCATCTAACTTTATAtagacacatgagaatccacacaggagagaaaccgttTATCTGCccagtctgtaagaaagcttttacagTGAGTGGAAATTTAAagagacacatgagaatccacacaggagagaaaccatttagctgctcagtctgtaagaaagcttttacagATGGTGGaaatttacagaaacacatgagaatccacaaaGGAGAGAAATAATGTAGCTGCTCAATCTGTAAGAATGATTTTATACTGGGTGGAAACTTACAGGCACACATGAGAACCCAACACGTGAGTGTTACAAGCTCCCCCCTTGTTTAGCTTCTCCCTGTCTGCTCTACTCAGGTGATCCTGATTTGATCGTTAGTGGTTGGCTCCGCccccaacacagtctcactccctactcgtcaaatgttgtatttgaggagttaaacaataaagatagttataatattaaaatacagtGTCATTTATTTGTCTACATTTAAACGAATCTGCGGAagtgacatgggtcagagcagtggttcccaaccttttttcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793007.1 True 1809 mRNA 0.43 3 17057688 17099481

Neighbor

gene id symbol gene type direction distance location
trnat-cgu_27 NA coding upstream 2310 17055306 ~ 17055378 (+)
trnat-agu_65 NA coding upstream 2919 17054696 ~ 17054769 (+)
trnat-ugu_46 NA coding upstream 5082 17052534 ~ 17052606 (+)
trnat-cgu_26 NA coding upstream 28244 17029372 ~ 17029444 (+)
trnat-agu_64 NA coding upstream 28626 17028989 ~ 17029062 (+)
trnat-agu_66 NA coding downstream 5087 17104568 ~ 17104641 (+)
trnat-cgu_30 NA coding downstream 5660 17105141 ~ 17105213 (+)
LOC120554254 NA coding downstream 13935 17113416 ~ 17124906 (+)
LOC120553999 NA coding downstream 69904 17169385 ~ 17178813 (+)
LOC120554211 NA coding downstream 121828 17221309 ~ 17268297 (+)
G235332 NA non-coding upstream 122022 16934799 ~ 16935666 (+)
G235321 NA non-coding upstream 216859 16840186 ~ 16840829 (+)
G235284 NA non-coding upstream 462839 16594198 ~ 16594849 (+)
LOC120554281 NA non-coding upstream 491644 16563427 ~ 16566044 (+)
trnat-agu_52 NA non-coding upstream 534376 16523239 ~ 16523312 (+)
LOC120554286 NA non-coding downstream 33635 17133116 ~ 17146492 (+)
LOC120554285 NA non-coding downstream 83874 17183355 ~ 17204668 (+)
G235497 NA non-coding downstream 213528 17313009 ~ 17313865 (+)
G235501 NA non-coding downstream 245984 17345465 ~ 17345923 (+)
G235530 NA non-coding downstream 250384 17349865 ~ 17350086 (+)
trnat-cgu_25 NA other upstream 105919 16951697 ~ 16951769 (+)
trnat-agu_63 NA other upstream 107194 16950421 ~ 16950494 (+)
LOC120554243 NA other upstream 125082 16880639 ~ 16932606 (+)
trnat-cgu_21 NA other upstream 295080 16762536 ~ 16762608 (+)
trnat-agu_56 NA other upstream 296116 16761499 ~ 16761572 (+)
als2b NA other downstream 782984 17882465 ~ 17938311 (+)
LOC120554216 mpp4 other downstream 853658 17953139 ~ 17966226 (+)
G235775 NA other downstream 1067805 18167286 ~ 18171954 (+)
G235778 NA other downstream 1077344 18176825 ~ 18181812 (+)
anos1a LOC103358938 other downstream 2572391 19671872 ~ 19698895 (+)

Expression


Co-expression Network