LOC120554239


Basic Information

Item Value
gene id LOC120554239
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 15636430 ~ 15654565 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793011.1
CTTTAATAACGTTTCTTTTACACGATAATCAAAGCCAATACAAGCCCGAGCTCCGCATGCGCTAGCACGCTGGGTTATCTCCGATGTTTACCAGATAGTTAGCTTCGGCTAGCCGCTGTGTGTGGCTAACTGccagtgttagcattagctttcTTTTGGCGTTTTGTGATTTAACTTTCAGTTACTagtgttttaaataaacactAGTTTTAAGGAGTTTTAAATTCTAATGTAGCTGAGCAGAAGCTATCAGGCTAATACGCAGTTAATATTAATGTGTCGCTGCAGTTAGCTGTTGTCAAATATAACAATGTTATATTTTGtataggggccagtaaaaattgaCTTTGGGCAAGTATAATTGTATTGTCAATCCCTAGAGCCTATTATCTCCTTCCCTTTGGTAAAGGATGGTCCAGTATAGCCTGTGCTAAAGGAGATTAAAGAAAGCACCTGATTAAGTGCAGGATGCTTTTGTCCATGATATTAGTAAACAAGTGTTTATCAAGATTAACTTTATTGTTGCACACAAATTTGTCATGGGCACTTAACCCATGCagcagtcataaaaaaaaactgttaatgtACATGTAATATGATGACAAACAATAACATTGTGTCACGCATtgcatatatttaaataatatatatatatatatagctaataATTGTgcaccgtttaaaaaaataaatgcttgTCACCCCTGCAGTCTAACCGTCCAACCGTTACACTGAACGGtacacagatttttttaaagatacaaaaaaactttgttctttcacaaacgtgctcattcatgtgtaattacttccaccaactaatcaaagtattcttgtaagcgtagaatctgtcATTCAGAATACGTACAAGTGAGTCACTCGAATGGCTGcagccatgttgcgcctccatctttaaaatacattagccaaagagggacatacctggACATTCAAGCACCGCCATTcacgcttttacactcagtggcagcgtgacgaatgccagggggggAGCTTACTCgcgactgccggcagatttgaaagccctgttgaagatggaggatcacaCCTATTCTCGAGGACGTGTAACAAAGTCGCCAAGGAAGCggaaaagagaattaaaacgacaacgcgacaggcaaagcaacacgACCAAAGTGAATATTGGgttggcttttccaagatggaaagagctcatgAGGAGCAAGAGTTTTAAAAGGGACGccgaagttgcctgctttcttatCGACAGAATCCAGAGTCCAGCAGCCACAGTGGAGACCTGCTGTATTTCAGACCAGGATCAGAACAAGAGCAGAATGGAGCACAACAACCAGAACCCGGAGCAGCAAAATAACAACGTCTCCAGAAGACAAGCAGCAGGCTCGGCCTCGGATACCACCGACGTGCAGAAACAAAGAGGAAGAGGGGGACTCGGATGTCATAGCTGTGAGCACTGTGACAAGTCCTTCAAAACAGCTACAAATTTAAAGATTCATCggagagttcacactggagaaaaACCGTACATCTGTGACAAATGTGGGAAAACGTTTTCTCGGAGTGGTAACTTAAAAAACCACTACCgaattcacactggagagaaaccaTACAGCTGTGGCGAATGTGGGAGAACTTTTTCTTCTAGTACTACCCTAAACaaccatcaacgcattcacactggagagaaaccaTACAGCTGTGACCTGTGCAAGAGAAGGTTTTCTCGGAGCGGTCACCTTAAAGGCCACCAACGTATTCACACTGGACAGAAACGTACTGGAGAGAAACATACTGATGTGAAGTACTGGTGTGACCAGTGTGGGGCAGCGTTCACAAGTTTAGGTGGCTTCAAAATTCATCaccgcattcacactggagagaaaccGTACAGTTGTGACCAATGCGGCGCAGTTTTTAGACTGTCAGGTAGCTTCAAAATGCATCAacgaacacacacaggagagaaaccttacAGCTGTGACCAATGCAGTGCAGTTTTCGCGCACTTGGGCAACTTGAAAAGCCATCAACGCAGTCACACAGGGGAGAAACCGTACAGATGTATCCAATGTGGTGCAGCTTTTGCACGGTCAGACAGCTTCAAAAcccatcaacgcattcacactggagataaacctTACAGGTGTGACCAATGTGATGCAGATTTCATACAGTTAAATCACTTGAAAGTCCATCAACGCATTCATACTGGAGAGAAACCCTACAGCTGTAACCTATGTGGCAAAAGTTTCACCAATCAAAGTAACCTAAAATCCCACCACCGTGTTCACTCTGCAAAGAAATGAGCTGCCAATTGCCGACGATCAAAATGGTTTCTAATTGGTTGATATGtggaatacattttatttggatACTTTTTTAGTTTTGGAAAAGCTTttacaatttacaaaaaaaatgtcttcctCAAATATGAGTTTGTTTGTTATGTGAATTCTTACTGCTAATATTACTTAGTGGTGTAACGGATCATAGATCCATGGTCTGTACGGATCTACACTCACGGTCGGAATGCAAATTCAATCAATTGCAAAGTTTAATAGTGGGAAAGAAATTTTTACGGTCGCTGTTAGCAATCGGTCCCTCCGTAACTCATGTTTTAGTTAATGTAATAAAGATCTTAATATTGCACCTAATCTGCCTTGCTCAGTAACTTCGGGAACATTGACAACTACGATTTTCATTTTGCAAAACAATAAATTATGTATTAATTAaccatttattcattaatttatctTTTATTCCCAAAGAACCTTGGAGTAAATTTTGCTAGCCACTTATCCAGTAATGTCACCCAAGCTTGTTTTGTTGTTCAATTAAGAAACCTCTCCGAGATCAGACACAAAAAAATCCTACATGTTTTTCTGTCATCACGCATTACCTATTTAAACTTATTCAGTCTACCAATTGCAATTCATCCAGAACTCAGCAGTCAAATTATTAACTAAATCTAAGAGGTTCTGTCTGGTCACTCCAATTAACAATTGTATTAATTAACATTCTTTAACTGCAAACTGACATTATCTAACTGTAACTTAACATTCTAGTACTGCAACATAAGTGTTTCTCAATACCAAGTATGCCAAGTTCAAACTTGTGAGCTTTGTAGTTCAGACTTTAGAAAAAGTACATCTGTGAGCTATTTCTTTACTGTAACGTATATTTACAATAAAACGAAATATGATATAA
>XM_039793012.1
CTTTAATAACGTTTCTTTTACACGATAATCAAAGCCAATACAAGCCCGAGCTCCGCATGCGCTAGCACGCTGGGTTATCTCCGATGTTTACCAGATAGTTAGCTTCGGCTAGCCGCTGTGTGTGGCTAACTGccagtgttagcattagctttcTTTTGGCGTTTTGTGATTTAACTTTCAGTTACTagtgttttaaataaacactAGTTTTAAGGAGTTTTAAATTCTAATGTAGCTGAGCAGAAGCTATCAGGCTAATACGCAGTTAATATTAATGTGTCGCTGCAGTTAGCTGTTGTCAAATATAACAATGTTATATTTTGtataggggccagtaaaaattgaCTTTGGGCAAGTATAATTGTATTGTCAATCCCTAGAGCCTATTATCTCCTTCCCTTTGGTAAAGGATGGTCCAGTATAGCCTGTGCTAAAGGAGATTAAAGAAAGCACCTGATTAAGTGCAGGATGCTTTTGTCCATGATATTAGTAAACAAGTGTTTATCAAGATTAACTTTATTGTTGCACACAAATTTGTCATGGGCACTTAACCCATGCagcagtcataaaaaaaaactgttaatgtACATGTAATATGATGACAAACAATAACATTGTGTCACGCATtgcatatatttaaataatatatatatatatatagctaataATTGTgcaccgtttaaaaaaataaatgcttgTCACCCCTGCAGTCTAACCGTCCAACCGTTACACTGAACGGtacacagatttttttaaagatacaaaaaaactttgttctttcacaaacgtgctcattcatgtgtaattacttccaccaactaatcaaagtattcttgtaagcgtagaatctgtcATTCAGAATACGTACAAGTGAGTCACTCGAATGGCTGcagccatgttgcgcctccatctttaaaatacattagccaaagagggacatacctggACATTCAAGCACCGCCATTcacgcttttacactcagtggcagcgtgacgaatgccagggggggAGCTTACTCgcgactgccggcagatttgaaagccctgttgaagatggaggatcacaCCTATTCTCGAGGACGTGTAACAAAGTCGCCAAGGAAGCggaaaagagaattaaaacgacaacgcgacagAATCCAGAGTCCAGCAGCCACAGTGGAGACCTGCTGTATTTCAGACCAGGATCAGAACAAGAGCAGAATGGAGCACAACAACCAGAACCCGGAGCAGCAAAATAACAACGTCTCCAGAAGACAAGCAGCAGGCTCGGCCTCGGATACCACCGACGTGCAGAAACAAAGAGGAAGAGGGGGACTCGGATGTCATAGCTGTGAGCACTGTGACAAGTCCTTCAAAACAGCTACAAATTTAAAGATTCATCggagagttcacactggagaaaaACCGTACATCTGTGACAAATGTGGGAAAACGTTTTCTCGGAGTGGTAACTTAAAAAACCACTACCgaattcacactggagagaaaccaTACAGCTGTGGCGAATGTGGGAGAACTTTTTCTTCTAGTACTACCCTAAACaaccatcaacgcattcacactggagagaaaccaTACAGCTGTGACCTGTGCAAGAGAAGGTTTTCTCGGAGCGGTCACCTTAAAGGCCACCAACGTATTCACACTGGACAGAAACGTACTGGAGAGAAACATACTGATGTGAAGTACTGGTGTGACCAGTGTGGGGCAGCGTTCACAAGTTTAGGTGGCTTCAAAATTCATCaccgcattcacactggagagaaaccGTACAGTTGTGACCAATGCGGCGCAGTTTTTAGACTGTCAGGTAGCTTCAAAATGCATCAacgaacacacacaggagagaaaccttacAGCTGTGACCAATGCAGTGCAGTTTTCGCGCACTTGGGCAACTTGAAAAGCCATCAACGCAGTCACACAGGGGAGAAACCGTACAGATGTATCCAATGTGGTGCAGCTTTTGCACGGTCAGACAGCTTCAAAAcccatcaacgcattcacactggagataaacctTACAGGTGTGACCAATGTGATGCAGATTTCATACAGTTAAATCACTTGAAAGTCCATCAACGCATTCATACTGGAGAGAAACCCTACAGCTGTAACCTATGTGGCAAAAGTTTCACCAATCAAAGTAACCTAAAATCCCACCACCGTGTTCACTCTGCAAAGAAATGAGCTGCCAATTGCCGACGATCAAAATGGTTTCTAATTGGTTGATATGtggaatacattttatttggatACTTTTTTAGTTTTGGAAAAGCTTttacaatttacaaaaaaaatgtcttcctCAAATATGAGTTTGTTTGTTATGTGAATTCTTACTGCTAATATTACTTAGTGGTGTAACGGATCATAGATCCATGGTCTGTACGGATCTACACTCACGGTCGGAATGCAAATTCAATCAATTGCAAAGTTTAATAGTGGGAAAGAAATTTTTACGGTCGCTGTTAGCAATCGGTCCCTCCGTAACTCATGTTTTAGTTAATGTAATAAAGATCTTAATATTGCACCTAATCTGCCTTGCTCAGTAACTTCGGGAACATTGACAACTACGATTTTCATTTTGCAAAACAATAAATTATGTATTAATTAaccatttattcattaatttatctTTTATTCCCAAAGAACCTTGGAGTAAATTTTGCTAGCCACTTATCCAGTAATGTCACCCAAGCTTGTTTTGTTGTTCAATTAAGAAACCTCTCCGAGATCAGACACAAAAAAATCCTACATGTTTTTCTGTCATCACGCATTACCTATTTAAACTTATTCAGTCTACCAATTGCAATTCATCCAGAACTCAGCAGTCAAATTATTAACTAAATCTAAGAGGTTCTGTCTGGTCACTCCAATTAACAATTGTATTAATTAACATTCTTTAACTGCAAACTGACATTATCTAACTGTAACTTAACATTCTAGTACTGCAACATAAGTGTTTCTCAATACCAAGTATGCCAAGTTCAAACTTGTGAGCTTTGTAGTTCAGACTTTAGAAAAAGTACATCTGTGAGCTATTTCTTTACTGTAACGTATATTTACAATAAAACGAAATATGATATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793011.1 True 3207 mRNA 0.40 3 15636430 15654565
XM_039793012.1 False 3093 mRNA 0.40 3 15636430 15654565

Neighbor

gene id symbol gene type direction distance location
LOC120554251 NA coding downstream 2810 15623152 ~ 15633620 (-)
LOC120554257 NA coding downstream 24770 15602315 ~ 15611660 (-)
LOC120553991 NA coding downstream 537790 15092204 ~ 15098640 (-)
gucy1b2 LOC103355875 coding downstream 672459 14935720 ~ 14963971 (-)
trnar-ccg_4 NA coding downstream 673997 14962361 ~ 14962433 (-)
LOC120554219 NA coding upstream 17572 15672137 ~ 15677967 (-)
cep70 NA coding upstream 30002 15684567 ~ 15699703 (-)
LOC120554215 NA coding upstream 83877 15738442 ~ 15754859 (-)
LOC120554237 NA coding upstream 113205 15767770 ~ 15781203 (-)
trnaq-uug_6 NA coding upstream 131756 15786321 ~ 15786392 (-)
G235053 NA non-coding downstream 79014 15556638 ~ 15557416 (-)
LOC120554274 NA non-coding downstream 150943 15482306 ~ 15485487 (-)
LOC120554277 NA non-coding downstream 207054 15428280 ~ 15429376 (-)
LOC120554282 NA non-coding downstream 267408 15368257 ~ 15369022 (-)
G235029 NA non-coding downstream 269538 15366408 ~ 15366892 (-)
G235075 zbed1 non-coding upstream 5728 15660293 ~ 15665882 (-)
G235151 NA non-coding upstream 228060 15882625 ~ 15883001 (-)
LOC120554279 NA non-coding upstream 319010 15973575 ~ 15991395 (-)
G235208 NA non-coding upstream 477021 16131586 ~ 16132246 (-)
G235215 NA non-coding upstream 545767 16200332 ~ 16200591 (-)
LOC120554377 LOC103355861 other downstream 622616 14966316 ~ 15013814 (-)
G234898 NA other downstream 786693 14847834 ~ 14849737 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 1346387 14194312 ~ 14290043 (-)
G234405 NA other downstream 2682305 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 3343287 12278519 ~ 12293143 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 594129 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 671528 16326093 ~ 16352877 (-)
G235387 NA other upstream 957418 16611983 ~ 16616316 (-)
LOC120554263 NA other upstream 1081621 16736186 ~ 16742288 (-)
trnat-cgu_19 NA other upstream 1101428 16755993 ~ 16756065 (-)

Expression


Co-expression Network