LOC120554251


Basic Information

Item Value
gene id LOC120554251
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 15623152 ~ 15633620 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793030.1
tgccatgggacctttaacataagTGATTCTTTTAAACCTCTGAGGTTCAGAGACTGCGTCATCAACGGACAAACCTGGTGGAACATCAATTTTGACTTTCTGTTATCATCCTTCCCCATCTCGGGAGCTTGACAAACAGCTTTAGTAGCTCTCAGGGCAACTAGTTTTACAACTGGTAAACACATGCCCAGAAAGAGAATAAGGTTGAACCTTACAAACACTGACCCACACAATTCAGAATAATCCCCAAGATCAAACCCACGATGTAGCTCCTTAATGCCCAGAGCTGTTTTGTGAGCCATGTACATGACGTCTTAGTAGCATAGATGTAGGAACAGCATTCAGTACCAAAACCATGCAAGTTCCCCCTGTGCTGCTAGCAACAGGTCAAGTGCCATGCAGTTTTGTAGAACCACAGTATGGCATGGTTGCAATCCAGCGTGCTAGTCCCATGGGGAAAGAAGTAAGATACCCCCCCAAATTGGAAATGAGAGCCATGTCACAGAAGATTGTCGACTATTACCCTATGTTACGTGATGCTGATCCAAATATGCCATATCTGACCATCTACACCAAAATGTATAAGCAACTCCAAAATATGAGATCCCCAAGGAAGAGGCAGGGCTCCGTACCACAAAGAGGAGTGGCCAAGACAGCTCTCTTCAGTGCACACAACCAAGAAATGGAGACAGATTGGACAGACACAAGCAACTCAAGTGATAATAGCATACTTCTTGAGAGCAATGATGACATCAGCGAGGACAACTCCAGTGCAGCATCCCCATTACAACTACCCTCCTCTGTGCCAAGGAAGCCAGAGAGTGGGACCAAAACCTTACTGCTGCCACCCGAATCAGCCTCAGGCTCCTCACCCAGGACTGTGATCGCTTCACCAACCACACCTGCAAAGGATGTTGTTGTCGGCCAGGACAAACTGAAGATGCAGGCTAGGCACTACAGGACCTTGAGCAACATGTACAATAAGCCCAATGCAAAACCCAATCACAACGATGTTGCTCAACTTTTGGACCTTGAGTTTGAGGCCAGACGGGCTTTCATCGATGCAGATGTTACAAGGGAAGAAGACCGACCTGCAAAAATCTTTGAGGCATATCCATGCTTCAAAGATGTTCgaaatGCAATGGATGAGCTGCGGCACATAGTAGGTGGCACCAACAGAAGATACGTCGAGGAAGTCAAAGGAAGATGGGCAGACTTTTGTGCCAAGGTACAGTTCTATGGTGTGTGGAAGAAAGCCCTGAAACCCCCTTTCCCTTTGGATGTCTGTGGAGTCAGGCGAAGACCCTGGCCTGTACCTGGAGAAGCGTCCTCTCTCCTTCCCAGTTCTGCTTTCTGATGGATCAACCACCATCGTGGCTGTGGGTAACGTACCTGTGACCACCCTCCCGCAGGAAGATTTCTCAGTTGGTGTTAATGGCA
>XM_039793031.1
GTTCCTATCCACATTCTTTTCCAGAGCTGACTTAAGACCAGCCTTCAGGCTATCAAGGGACAGCATCAACATGCTGCTCCTGATGCTCCCCAGACAGAAAGCCCATGACTGGAGCCATGAGTTTCAAGTGCTGGTCACAGTCTACTGGCTTGCCTGTGGAGCCGTATACAGGGTAGCTGCAGACATTTTTGGCATGCCACTTTCCAATGCGTGCTGGACTGTCAACAATGTTGTCGGGGAAACAATTACCATCCTCCACAGGGTGATGCATTTCCCAAAacaaggagagaaggaggaggtggGAGCCGGCTTTGCTCGTTTCACTGGCCATGAGGCATTCCGCTGTGCTGCCGGTGCCATTGATGGGTGCCACATCAGGATCCTTCCTCCTACAGAGCCACAGAACAGGCTCTATGTCCACCAGCTGGGTACTTCTTGTTAGGAGAGGGAGGGTACCTGTGCCTGCAGTGTCCTGGTGCTATCATGACGCATACCAGCAGCATGTAGGAGCTGACCATCTACACCAAAATGTATAAGCAACTCCAAAATATGAGATCCCCAAGGAAGAGGCAGGGCTCCGTACCACAAAGAGGAGTGGCCAAGACAGCTCTCTTCAGTGCACACAACCAAGAAATGGAGACAGATTGGACAGACACAAGCAACTCAAGTGATAATAGCATACTTCTTGAGAGCAATGATGACATCAGCGAGGACAACTCCAGTGCAGCATCCCCATTACAACTACCCTCCTCTGTGCCAAGGAAGCCAGAGAGTGGGACCAAAACCTTACTGCTGCCACCCGAATCAGCCTCAGGCTCCTCACCCAGGACTGTGATCGCTTCACCAACCACACCTGCAAAGGATGTTGTTGTCGGCCAGGACAAACTGAAGATGCAGGCTAGGCACTACAGGACCTTGAGCAACATGTACAATAAGCCCAATGCAAAACCCAATCACAACGATGTTGCTCAACTTTTGGACCTTGAGTTTGAGGCCAGACGGGCTTTCATCGATGCAGATGTTACAAGGGAAGAAGACCGACCTGCAAAAATCTTTGAGGCATATCCATGCTTCAAAGATGTTCgaaatGCAATGGATGAGCTGCGGCACATAGTAGGTGGCACCAACAGAAGATACGTCGAGGAAGTCAAAGGAAGATGGGCAGACTTTTGTGCCAAGGTACAGTTCTATGGTGTGTGGAAGAAAGCCCTGAAACCCCCTTTCCCTTTGGATGTCTGTGGAGTCAGGCGAAGACCCTGGCCTGTACCTGGAGAAGCGTCCTCTCTCCTTCCCAGTTCTGCTTTCTGATGGATCAACCACCATCGTGGCTGTGGGTAACGTACCTGTGACCACCCTCCCGCAGGAAGATTTCTCAGTTGGTGTTAATGGCA
>XM_039793032.1
GTTCCTATCCACATTCTTTTCCAGAGCTGACTTAAGACCAGCCTTCAGGCTATCAAGGGACAGCATCAACATGCTGCTCCTGATGCTCCCCAGACAGAAAGCCCATGACTGGAGCCATGAGTTTCAAGTGCTGGTCACAGTCTACTGGCTTGCCTGTGGAGCCGTATACAGGGTAGCTGCAGACATTTTTGGCATGCCACTTTCCAATGCGTGCTGGACTGTCAACAATGTTGTCGGGGAAACAATTACCATCCTCCACAGGGTGATGCATTTCCCAAAacaaggagagaaggaggaggtggGAGCCGGCTTTGCTCGTTTCACTGGCCATGAGGCATTCCGCTGTGCTGCCGGTGCCATTGATGGGTGCCACATCAGGATCCTTCCTCCTACAGAGCCACAGAAGCTCTATGTCCACCAGCTGGGTACTTCTTGTTAGGAGAGGGAGGGTACCTGTGCCTGCAGTGTCCTGGTGCTATCATGACGCATACCAGCAGCATGTAGGAGCTGACCATCTACACCAAAATGTATAAGCAACTCCAAAATATGAGATCCCCAAGGAAGAGGCAGGGCTCCGTACCACAAAGAGGAGTGGCCAAGACAGCTCTCTTCAGTGCACACAACCAAGAAATGGAGACAGATTGGACAGACACAAGCAACTCAAGTGATAATAGCATACTTCTTGAGAGCAATGATGACATCAGCGAGGACAACTCCAGTGCAGCATCCCCATTACAACTACCCTCCTCTGTGCCAAGGAAGCCAGAGAGTGGGACCAAAACCTTACTGCTGCCACCCGAATCAGCCTCAGGCTCCTCACCCAGGACTGTGATCGCTTCACCAACCACACCTGCAAAGGATGTTGTTGTCGGCCAGGACAAACTGAAGATGCAGGCTAGGCACTACAGGACCTTGAGCAACATGTACAATAAGCCCAATGCAAAACCCAATCACAACGATGTTGCTCAACTTTTGGACCTTGAGTTTGAGGCCAGACGGGCTTTCATCGATGCAGATGTTACAAGGGAAGAAGACCGACCTGCAAAAATCTTTGAGGCATATCCATGCTTCAAAGATGTTCgaaatGCAATGGATGAGCTGCGGCACATAGTAGGTGGCACCAACAGAAGATACGTCGAGGAAGTCAAAGGAAGATGGGCAGACTTTTGTGCCAAGGTACAGTTCTATGGTGTGTGGAAGAAAGCCCTGAAACCCCCTTTCCCTTTGGATGTCTGTGGAGTCAGGCGAAGACCCTGGCCTGTACCTGGAGAAGCGTCCTCTCTCCTTCCCAGTTCTGCTTTCTGATGGATCAACCACCATCGTGGCTGTGGGTAACGTACCTGTGACCACCCTCCCGCAGGAAGATTTCTCAGTTGGTGTTAATGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793030.1 True 1440 mRNA 0.48 6 15623152 15627585
XM_039793031.1 False 1391 mRNA 0.51 7 15623152 15633620
XM_039793032.1 False 1388 mRNA 0.51 7 15623152 15633620

Neighbor

gene id symbol gene type direction distance location
LOC120554257 NA coding downstream 11492 15602315 ~ 15611660 (-)
LOC120553991 NA coding downstream 524512 15092204 ~ 15098640 (-)
gucy1b2 LOC103355875 coding downstream 659181 14935720 ~ 14963971 (-)
trnar-ccg_4 NA coding downstream 660719 14962361 ~ 14962433 (-)
chrm4a LOC104937647,LOC103355860,LOC100699420 coding downstream 698808 14878558 ~ 14924344 (-)
LOC120554239 NA coding upstream 2810 15636430 ~ 15654565 (-)
LOC120554219 NA coding upstream 38517 15672137 ~ 15677967 (-)
cep70 NA coding upstream 50947 15684567 ~ 15699703 (-)
LOC120554215 NA coding upstream 104822 15738442 ~ 15754859 (-)
LOC120554237 NA coding upstream 134150 15767770 ~ 15781203 (-)
G235053 NA non-coding downstream 65736 15556638 ~ 15557416 (-)
LOC120554274 NA non-coding downstream 137665 15482306 ~ 15485487 (-)
LOC120554277 NA non-coding downstream 193776 15428280 ~ 15429376 (-)
LOC120554282 NA non-coding downstream 254130 15368257 ~ 15369022 (-)
G235029 NA non-coding downstream 256260 15366408 ~ 15366892 (-)
G235075 zbed1 non-coding upstream 26673 15660293 ~ 15665882 (-)
G235151 NA non-coding upstream 249005 15882625 ~ 15883001 (-)
LOC120554279 NA non-coding upstream 339955 15973575 ~ 15991395 (-)
G235208 NA non-coding upstream 497966 16131586 ~ 16132246 (-)
G235215 NA non-coding upstream 566712 16200332 ~ 16200591 (-)
LOC120554377 LOC103355861 other downstream 609338 14966316 ~ 15013814 (-)
G234898 NA other downstream 773415 14847834 ~ 14849737 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 1333109 14194312 ~ 14290043 (-)
G234405 NA other downstream 2669027 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 3330009 12278519 ~ 12293143 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 615074 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 692473 16326093 ~ 16352877 (-)
G235387 NA other upstream 978363 16611983 ~ 16616316 (-)
LOC120554263 NA other upstream 1102566 16736186 ~ 16742288 (-)
trnat-cgu_19 NA other upstream 1122373 16755993 ~ 16756065 (-)

Expression


Co-expression Network