LOC120554255


Basic Information

Item Value
gene id LOC120554255
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16201422 ~ 16220686 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793039.1
TAAACACTGTGACACCCAGCGGAAGTAAACAACACCAGCCCGTAGCATTAGCTGAATGCTCGTGTTGAGTGAGCTGGAGGACACTGTATTGTAGTCGTAGTGCAGCTAATTCTTTCGGCTGTAATTAAGCAGCAATGTCTTCATTTGGGTATTTGAGAGAGTTTGTCAACGAGCGgctaactgctgctgctgaagaaatATTCCGAGTTTTTGAAAAATCTATCGCCGAGTACGAGGAGGAGATCCATCGTCAGCGCAGACTGTTGGATATCGTTTGGAAACCCGAAATACATTTACACAGGATAGACGTCcagcagctgttggtggttaaagaagaggttccccctgagcagcaggagtggagCTCCAATCTGGACCAGGAGGACACAAAGCCCCCACacaaagaggaacaggagaaaTTTCGAATAAGTCAGGAGGAAGAGCAGCTTCAAGgactggaggaggctgatatcaccaagttcctaTTCACTcttgtccctgtgaagagtgaagatgatgaagagaaacCTCAGTTCTCACAATTTCAAAGAGAAACTGAACAGAtgaaaacagaagctgatgtagaggactgtggaggaccaggaccagaaccagccaggaccTCAGATCCAGATAACCATTTAAAAGCACTTACTGATTACACGGATGGAGACTCTTTCCAATCTAAGAATGATGACATTGATGATTGGAAAGAGACCATAACCTCTCTGACTAATAATGAAGTCTCTGCCAGTGATCTGAGATGTAGTGCTGATGAGAAAGAGTGTGAGAAAATGTTTGGCACCAGTGGAcatctgaagagacacatgaaaACTCATACAGGaaagaaaccatttagctgctcagtctgtaagaaggCTTTTGAACGTAGTGGAcatttacagacacacatgagagtccacacaggagagaaaccatttagctgctacGTGTGTAACAAAGCCTTTTCAGTAAGAGGATCTTTAAAggcacacatgagaatccacacaggagagaaaccatttagctgctccgTCTGTAAAAAACTTTTACAGTGAGTGGACATTTACAggcacacatgagaatccacacaggagagaaaccgtttagctgctcagtgtgtaagaaagcttttacagAGAGTGGACATTTACATAAACATATGAGAATCCACACATGAGAAAACCCATTATCTGCTCAGTGTGTACGAAAGCTTTTACTTGGATTGCAAGTTTACAGAGACACACGAGAACCCACCATTTTTGCAACCTAAACTGAACTTGTAAGGAAATCGCATACAACCCAAGGTCTCTCCTAAATGGTGGCTGTTTTGCAGTCACAAGGAAGATCCACCTAACTCAGTCTCTCAGCAGACTCTCCAGTCTGTACACTTAGTTTGAAGTGCTGTGACATCCCGATCCCTATAAAAGCAACAATTGCTATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793039.1 True 1445 mRNA 0.44 2 16201422 16220686

Neighbor

gene id symbol gene type direction distance location
LOC120553997 NA coding upstream 6570 16183840 ~ 16194852 (+)
LOC120554217 NA coding upstream 25394 16171047 ~ 16176028 (+)
trnat-cgu_14 NA coding upstream 34801 16166549 ~ 16166621 (+)
trnat-agu_39 NA coding upstream 38467 16162882 ~ 16162955 (+)
LOC120554230 NA coding upstream 48549 16140119 ~ 16152873 (+)
trnat-ugu_42 NA coding downstream 4069 16224755 ~ 16224827 (+)
LOC120554222 NA coding downstream 273446 16494132 ~ 16501285 (+)
trnas-uga_33 NA coding downstream 281386 16502072 ~ 16502153 (+)
trnak-cuu_44 NA coding downstream 401997 16622683 ~ 16622755 (+)
trnat-agu_53 NA coding downstream 402317 16623003 ~ 16623076 (+)
G235185 NA non-coding upstream 5722 16195562 ~ 16195700 (+)
LOC120554276 NA non-coding upstream 74631 16125461 ~ 16126791 (+)
G235152 NA non-coding upstream 317412 15883763 ~ 15884010 (+)
LOC120554272 NA non-coding upstream 517932 15676977 ~ 15683490 (+)
G235074 NA non-coding upstream 534066 15666872 ~ 15667356 (+)
G235216 NA non-coding downstream 734 16221420 ~ 16222735 (+)
G235243 NA non-coding downstream 102155 16322841 ~ 16324248 (+)
trnat-agu_42 NA non-coding downstream 285935 16506621 ~ 16506694 (+)
trnak-cuu_34 NA non-coding downstream 286883 16507569 ~ 16507641 (+)
trnat-agu_43 NA non-coding downstream 287207 16507893 ~ 16507966 (+)
LOC120554227 NA other upstream 1158978 15028838 ~ 15042444 (+)
LOC120554715 LOC103355859,LOC104964875 other upstream 1291347 14806527 ~ 14910075 (+)
G234651 NA other upstream 2056552 14115859 ~ 14144870 (+)
LOC120554638 tmem47,LOC104936888,LOC106530717,LOC102201289 other upstream 2998610 13169370 ~ 13202812 (+)
G234425 tsc22d1,LOC106531085,LOC102196627 other upstream 3175902 13002963 ~ 13025520 (+)
LOC120554234 NA other downstream 168011 16388697 ~ 16612671 (+)
trnat-cgu_20 NA other downstream 535879 16756565 ~ 16756637 (+)
trnat-ugu_43 NA other downstream 539672 16760358 ~ 16760430 (+)
trnat-agu_56 NA other downstream 540813 16761499 ~ 16761572 (+)
trnat-cgu_21 NA other downstream 541850 16762536 ~ 16762608 (+)

Expression


Co-expression Network