LOC120554256


Basic Information

Item Value
gene id LOC120554256
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17966724 ~ 17967809 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793040.1
gtccctttGAAGAGTGAaggtgatgaagaggaagctcagtcctcacagcttcatcaaagaaAAACTCAActcatggaaacagaagctgacgGAGTGgagtgtggaggaccagaacaaGCCAAGAACTCACATCCAAGTTTACAGCCacagactgaagaccagactggagactcttctgaacctgagactgatgacagtgctgattggaaggagaccagagaacctcagtcagctttaaactctctcaAACAGGATTCAGCGTGTAAGAAaccattcagctgctctgagtgtggcaACAGATTTGGCTACAATGCACACCTGAAGAtccacatgagaactcacacaggtgaaaagcctttcagctgcagtgtttgtaataaatcttttacaATAAGTGGACATTTACAGTACCACATGAAAACTCACACAggtgaaaaacctttcagctgctctgagtgtgataAAGCTTTCACTGGAAGTGGAAACCTGAagaaacacatgagaactcacacaggagagaagccttttagctgctcagAGTGTGATAAAGCTTTCTCTGCGAGTGGAACCATGAAGAAACATATGAAAACTCACACGGGAGAaagacctttcagctgctctgagtgtggcaACAGATTCGGTAACAAGGCACGGCTGAAGAGCCACATGAGatctcacacaggagagaagcctttcagctgctctgagtgtgataAAGCTTTCACTGGAAGAGGAAACCTGAagaaacacatgagaactcacacaggtgaAAAATCTTTCAGCTGCAATGTTTGTAACAGAAGATTTGCCTGGCGTTCTGATGTCAAAACgcataaatgtgttggtccgatggaaacagaagctgacggagaggactgtggaggaccagaaccagccaggaactcacatccacgtTTACAACaggagactgaagaccagactggagactcttcggATCCTGAGACTGGTGACATGGAATAGCGTTTGTGCCTTTAagtccaagcaaaacttctcaagtatcaaacaaagaTCTGTATGTATcaacatctacagtatatagaaGACATTATATTGTGCGGTTGGAAA

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793040.1 True 1086 mRNA 0.45 1 17966724 17967809

Neighbor

gene id symbol gene type direction distance location
LOC120554000 LOC100690921,LOC103360025 coding downstream 88836 17862318 ~ 17877888 (-)
LOC120554260 NA coding downstream 233784 17718997 ~ 17732940 (-)
ahr2 NA coding downstream 278212 17604922 ~ 17688512 (-)
LOC120554202 LOC102788442 coding downstream 369574 17548583 ~ 17597150 (-)
LOC120554203 mfsd6 coding downstream 459463 17491167 ~ 17507261 (-)
LOC120554266 NA coding upstream 157 17967966 ~ 17969403 (-)
LOC120554265 NA coding upstream 3392 17971201 ~ 17973177 (-)
LOC120554632 LOC103360035,LOC103370267 coding upstream 62027 18029836 ~ 18102031 (-)
abi2b abi2 coding upstream 146186 18113995 ~ 18143453 (-)
LOC120554721 LOC104966233,LOC100698939 coding upstream 176168 18143977 ~ 18158300 (-)
G235725 NA non-coding downstream 23227 17943210 ~ 17943497 (-)
G235724 NA non-coding downstream 26397 17934775 ~ 17940327 (-)
G235723 NA non-coding downstream 35739 17930532 ~ 17930985 (-)
G235722 NA non-coding downstream 36249 17930246 ~ 17930475 (-)
G235721 NA non-coding downstream 53557 17912867 ~ 17913167 (-)
G235743 NA non-coding upstream 18113 17985922 ~ 17986178 (-)
G235793 NA non-coding upstream 94485 18062294 ~ 18113957 (-)
G235816 NA non-coding upstream 242694 18210503 ~ 18214168 (-)
G235844 NA non-coding upstream 285015 18252824 ~ 18300953 (-)
LOC120554613 NA non-coding upstream 289134 18256943 ~ 18257506 (-)
s100b LOC103360204,LOC104927403 other downstream 221467 17734731 ~ 17745257 (-)
G235350 NA other downstream 863207 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 1210659 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 1224436 16736186 ~ 16742288 (-)
G235387 NA other downstream 1350408 16611983 ~ 16616316 (-)
LOC120554370 LOC103370263 other upstream 303269 18271078 ~ 18327103 (-)
LOC120554371 mbd5,LOC102784158 other upstream 436417 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 1555695 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 1763510 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 2399532 20367341 ~ 20368433 (-)

Expression


Co-expression Network