LOC120554263


Basic Information

Item Value
gene id LOC120554263
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16736186 ~ 16742288 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793050.1
ttttatagatgtaTTCAATAGTTGTTTTTACTGAAAAGAATGAGACCGAGGTTATACCAAGTGACTGGCTGAGCATCGACaaaaaagtttccttttggccCCCATATAACGGTACAAGATGTAGAAAAgcagttgaaaaaaatgaaactcCTGATGAAGAATGGGACGAATATGAAACTGAATGGGTGGCTGAGTATGGTTCCTATGAAAAAGCCAGAAGAAAGCTGGTGAAGTTCTGTGAAGGCAACAGTTTGGAGTCTACAGATGAGGACAGTGTACGGAAAAGAGTACCATCGGCAAAATATGTAAATGGATTTACATCTGGTACAGCCTCAGGAAGACCTCCAGTGCAGGCCTCAACAAGCCGGCTCCACACAGAGACAATGGAAAGACCAAAAAAGAAATTCTGCAGTAATGGAGCCAAAAGCCTGACCTTGCCAACCATACCTCTATTTGCACCATCAGCACCTGCTGTGACAGTCCCTGAACCAAGACAAGATGATGCAGCCAAAAAACAAGGCACAAAAGTGGTGGAAGCCGAggaaaaaattaaaacctgGCTGAAGTACAGTGGAGACCGAaatggaggaagaaaaaaaagagcaacagAAAAAGAAAAGCAGATGCCTCCCCCTCATGCAGATTCCAGCAGCTGCGAAAGTGAATGTAAGTGTCTTCCAATGattgttttttcttcctctgtctAACCTACCATTAAACAGAGGCGTATTTCATCTTCACTAGGCATACAGCCTTATCTTCACTGCATGAAGATGTATAAAATATGTGCT
>XM_039793051.1
ttttatagatgtaTTCAATAGTTGTTTTTACTGAAAAGAATGAGACCGAGGTTATACCAAGTGACTGGCTGAGCATCGACaaaaaagtttccttttggccCCCATATAACGGTACAAGATGTAGAAAAgcagttgaaaaaaatgaaactcCTGATGAAGAATGGGACGAATATGAAACTGAATGGGTGGCTGAGTATGGTTCCTATGAAAAAGCCAGAAGAAAGCTGGTGAAGTTCTGTGAAGGCAACAGTTTGGAGTCTACAGATGAGGACAGTGTACGGAAAAGAGTACCATCGGCAAAATATGTAAATGGATTTACATCTGGTACAGCCTCAGGAAGACCTCCAGTGCAGGCCTCAACAAGCCGGCTCCACACAGAGACAATGGAAAGACCAAAAAAGAAATTCTGCAGTAATGGAGCCAAAAGCCTGACCTTGCCAACCATACCTCTATTTGCACCATCAGCACCTGCTGTGACAGTCCCTGAACCAAGACAAGATGATGCAGCCAAAAAACAAGGCACAAAAGTGGTGGAAGCCGAggaaaaaattaaaacctgGCTGAAGTACAGTGGAGACCGAaatggaggaagaaaaaaaagagcaacagAAAAAGAAAAGCAGATGCCTCCCCCTCATGCAGATTCCAGCAGCTGCGAAAGTGAATgaAAAGATGCTGCtacttctcctcctctgctccgTCTTCATCATAAGAGCCACACACAATCTAATTTGCTTCAAATCTGCAAAAA
>XR_005638337.1
ttttatagatgtaTTCAATAGTTGTTTTTACTGAAAAGAATGAGACCGAGGTTATACCAAGTGACTGGCTGAGCATCGACaaaaaagtttccttttggccCCCATATAACGGTACAAGATGTAGAAAAgcagttgaaaaaaatgaaactcCTGATGAAGAATGGGACGAATATGAAACTGAATGGGTGGCTGAGTATGGTTCCTATGAAAAAGCCAGAAGAAAGCTGGTGAAGTTCTGTGAAGGCAACAGTTTGGAGTCTACAGATGAGGACAGTGTACGGAAAAGAGTACCATCGGCAAAATATGTAAATGGATTTACATCTGGTACAGCCTCAGGAAGACCTCCAGTGCAGGCCTCAACAAGCCGGCTCCACACAGAGACAATGGAAAGACCAAAAAAGAAATTCTGCAGTAATGGAGCCAAAAGCCTGACCTTGCCAACCATACCTCTATTTGCACCATCAGCACCTGCTGTGACAGTCCCTGAACCAAGACAAGATGACAAGATATCTTACCAGCTTGGGTGGAACATCTGCCAAAGACATTGTCCACAGAATCATGAGGGAAATTATGACCAATGAGTTGGCCAACAATTTTAATTGGCAAGGGAGAGGACAGAAGAGCCCCTTTTCTGCGCTCTTGCTGGCAAAAGTTGTCATAGGtgatatgttttaaaaaacattcaaatattcAAAACTTAGACATAACTTTGAAATAGCAAAAGAGGAAACAACCCCTTACAGTCTCACATAATGTGTCATTGAATGAAATACAAGTCAATGGAAGAATgccaattaatcaactaatcgtACAGAACTCTACAAAATACAACTCAGATGATCTGTCGGCTAACCCTTTCTCTGtttaattttctttaatttCATGCTGACAGATGCAGCCAAAAAACAAGGCACAAAAGTGGTGGAAGCCGAggaaaaaattaaaacctgGCTGAAGTACAGTGGAGACCGAaatggaggaagaaaaaaaagagcaacagAAAAAGAAAAGCAGATGCCTCCCCCTCATGCAGATTCCAGCAGCTGCGAAAGTGAATgaAAAGATGCTGCtacttctcctcctctgctccgTCTTCATCATAAGAGCCACACACAATCTAATTTGCTTCAAATCTGCAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793050.1 False 791 mRNA 0.42 6 16739669 16742288
XM_039793051.1 False 751 mRNA 0.43 7 16736186 16742288
XR_005638337.1 True 1142 transcript 0.41 7 16736186 16742288

Neighbor

gene id symbol gene type direction distance location
trnat-agu_55 NA coding downstream 7679 16728434 ~ 16728507 (-)
LOC120554206 NA coding downstream 97991 16616703 ~ 16638195 (-)
LOC120554223 NA coding downstream 179731 16531962 ~ 16556455 (-)
trnat-cgu_16 NA coding downstream 231256 16504858 ~ 16504930 (-)
trnam-cau_66 NA coding downstream 235656 16500458 ~ 16500530 (-)
trnat-ugu_45 NA coding upstream 121589 16863877 ~ 16863949 (-)
trnat-agu_60 NA coding upstream 122145 16864433 ~ 16864506 (-)
trnat-cgu_22 NA coding upstream 129568 16871856 ~ 16871928 (-)
trnat-agu_61 NA coding upstream 130753 16873041 ~ 16873114 (-)
LOC120553998 NA coding upstream 143021 16885309 ~ 16904529 (-)
G235357 NA non-coding downstream 24994 16681727 ~ 16711192 (-)
LOC120554273 NA non-coding downstream 169095 16562804 ~ 16567091 (-)
LOC120554287 NA non-coding downstream 229555 16505591 ~ 16506631 (-)
trnat-cgu_15 NA non-coding downstream 382237 16353877 ~ 16353949 (-)
LOC120554275 NA non-coding downstream 390921 16340797 ~ 16345265 (-)
G235413 NA non-coding upstream 24378 16766666 ~ 16775545 (-)
G235427 NA non-coding upstream 131547 16873835 ~ 16876854 (-)
LOC120554268 NA non-coding upstream 133721 16876009 ~ 16916699 (-)
G235471 NA non-coding upstream 433334 17175622 ~ 17175960 (-)
G235512 NA non-coding upstream 523972 17266260 ~ 17330177 (-)
G235387 NA other downstream 119870 16611983 ~ 16616316 (-)
LOC120554218 NA other downstream 383309 16326093 ~ 16352877 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other downstream 448036 16248694 ~ 16288150 (-)
LOC120554377 LOC103355861 other downstream 1722372 14966316 ~ 15013814 (-)
G234898 NA other downstream 1886449 14847834 ~ 14849737 (-)
trnat-cgu_19 NA other upstream 13705 16755993 ~ 16756065 (-)
G235350 NA other upstream 322014 17064302 ~ 17103517 (-)
s100b LOC103360204,LOC104927403 other upstream 992443 17734731 ~ 17745257 (-)
LOC120554370 LOC103370263 other upstream 1528790 18271078 ~ 18327103 (-)
LOC120554371 mbd5,LOC102784158 other upstream 1661938 18404226 ~ 18439418 (-)

Expression


Co-expression Network