LOC120554264 (LOC103360215,LOC103389527,LOC101479567,LOC101064475)


Basic Information

Item Value
gene id LOC120554264
gene name LOC103360215,LOC103389527,LOC101479567,LOC101064475
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17835894 ~ 17836902 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793052.1
CATTAAAGAGGCTGGTCCACgcgtcactcacacacacacaccatcacttGTGCGTGTTGGTGTCACTACGTGAAGACAGCTGCTGCACTGCACGCGTTCGTAGACACACGCAGATGCGGAAACGTGATATGACGTTTGGAAAGCGGTGCGCGcggtaaaaaattaaaaactgtGCGTTCGTGTGATGATTTGACTGGTTTTGCGGACTGCCGTCGCTGCTGTTTGGAGTGAGTCCAGGGATGCTGCGGCTTGTCTCGCTGCCGGAGTGCCGCCGCCGCCGCGGCACACTCCGCAGTCGCTAAACGCGGGAGCGGCGCGGGTCAGTCTTTCCATCCCATCCCATCCCAGCCCGGGGGCTGCGACATGGGGAACAGCTTCTCCAACCTGGGCGCCTTCCAGTCCTTGCACATAGTCATGCTCGGCTTGGACTCCGCGGGCAAAACCACCGTGCTGTACCGCCTGAAATTCAACGAGTTCGTCAACACGGTGCCCACCATCGGCTTCAACACGGAGCGGATCCGGCTGGGCGGCGCGGGGGCGTCGCGCGGCATCAGCTGCCACTTCTGGGACGTCGGCGGCCAGGAGAAGCTGCGGCCCCTGTGGAAGCCATACAGCCGCTGCACGGACGGCATCGTGTACGTGGTGGACTCCGTGGACGCCGAGAGGCTGGAGGAGGCCCGCGCCGAGCTGCACAAGATCACGCGCTTCTCGGAGAACCAGGGCACGCCGCTGCTCGTCGTGGCCAACAAGCAGGACCTGCCGCGGGCGCTGGACGTCGCGGAGATCGAGCGGCAGCTGGCCCTGGCCGAGCTGAGCCCGTCCACGCCGTACCACGTCCAGCCCGCGTGCGCCATCATCGGAGAGGGGCTGCACGAGGGCATGGACAAGCTGTACGAGATGATAGTGAAGAGGAGGAAGTCgctgaagcagaagaagaagaggcagTGAtggcagattttcttttttttttttttctttttagaaatATCTAGAACTTTGCAGTGATTGG

Function

NR:

description
PREDICTED: ADP-ribosylation factor-like protein 4C

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07945 ARL4; ADP-ribosylation factor-like protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793052.1 True 1009 mRNA 0.61 1 17835894 17836902

Neighbor

gene id symbol gene type direction distance location
LOC120554200 sh3bp4,LOC103360214 coding upstream 28141 17775532 ~ 17807753 (+)
LOC120554248 LOC103366962 coding upstream 471829 17357447 ~ 17364065 (+)
LOC120554209 NA coding upstream 492865 17340047 ~ 17343029 (+)
LOC120554229 NA coding upstream 528956 17289184 ~ 17306938 (+)
LOC120554211 NA coding upstream 567597 17221309 ~ 17268297 (+)
LOC120554001 LOC103375332 coding downstream 351748 18188650 ~ 18238425 (+)
orc4 orc4 coding downstream 607277 18444179 ~ 18453002 (+)
zeb2b zeb2,LOC103355929 coding downstream 1187246 19024148 ~ 19127654 (+)
LOC120554051 xdh coding downstream 1676000 19512902 ~ 19522669 (+)
LOC120554004 NA coding downstream 1748633 19585535 ~ 19599669 (+)
G235625 NA non-coding upstream 7423 17815715 ~ 17828471 (+)
G235609 NA non-coding upstream 90741 17742792 ~ 17745153 (+)
G235619 NA non-coding upstream 103114 17729469 ~ 17732780 (+)
G235614 NA non-coding upstream 108801 17722096 ~ 17727093 (+)
G235589 NA non-coding upstream 293733 17512726 ~ 17542161 (+)
G235630 NA non-coding downstream 168 17837070 ~ 17838244 (+)
G235703 NA non-coding downstream 54688 17891590 ~ 17902611 (+)
G235699 NA non-coding downstream 102192 17939094 ~ 17940272 (+)
G235707 NA non-coding downstream 105918 17942820 ~ 17943107 (+)
G235710 NA non-coding downstream 134077 17970979 ~ 17971360 (+)
trnat-cgu_25 NA other upstream 884125 16951697 ~ 16951769 (+)
trnat-agu_63 NA other upstream 885400 16950421 ~ 16950494 (+)
LOC120554243 NA other upstream 903288 16880639 ~ 16932606 (+)
trnat-cgu_21 NA other upstream 1073286 16762536 ~ 16762608 (+)
trnat-agu_56 NA other upstream 1074322 16761499 ~ 16761572 (+)
als2b NA other downstream 45563 17882465 ~ 17938311 (+)
LOC120554216 mpp4 other downstream 116237 17953139 ~ 17966226 (+)
G235775 NA other downstream 330384 18167286 ~ 18171954 (+)
G235778 NA other downstream 339923 18176825 ~ 18181812 (+)
anos1a LOC103358938 other downstream 1834970 19671872 ~ 19698895 (+)

Expression


Co-expression Network