LOC120554265


Basic Information

Item Value
gene id LOC120554265
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17971201 ~ 17973177 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793053.1
ctgaagaccagactggagactcttctgaacctgagactgatgacagtgctgattggaaggagaccagagaacctcagtcagctttaaactctctcaAACATGATTCAACGTGTAAGAAaccattcagctgctctgagtgtggcaACAGATTTGGCAAAAAGGCACACCTGAAGATCCACATGAGatctcacacaggagagaagcctttcagctgctctgagtgtgataAGGCTTTCACCAAAAGTGGAAGCCTGAagaaacacatgagaactcacacaggagaaaagcctttcagctgctctgagtgtgataAAGCTTTCACTGAAAATGGAAGCCTGAAGAaccacatgagaactcacaccGGTGAaaagcctttcagctgctctgagtgtgataAATCTTTCATCCTAAGTGGACACCTGAagaaacacatgagaactcacacaggagagaagcctttcagctgctctgagtgtgataAATCTTTCACCGAAAATGGAACCCTGAAGAtccacatgagaactcacacaggagaaagacctttcagctgcagtgtttgtaataaatcttttacaGTAAGTGGAGGTTTACAGTACCACATGAAAACCCACACAggtgaaaaacctttcagctgctcggAGTGTGATAAAGCTTTCCCGGAAAGTGGAAGCCTGAagaaacacatgagaactcacacaggagaaagacCTTTCAGCTGCCCagtttgtaagaaatcttttagagagagaggaggtttacggtcacacatggcagtccacacaggagagaaaagattcagctgcagtgtttgtaacagAAGATTTGCCTGGCGTGCTGATGTCAAAgcacataaatgtgttggtccgatggaaacagaagctgacggagaggactgtggaggaccagaaccagccaggcaCTCAGATCCACGTTTACAACCaaagactgaagaccagactggagactcttctgatcctgagactgatgacagtggtgattggaaggagaccagagaacctcagtcagctttaaactctctgaaacaggATTCAACGTGTAAGAAACCATTCAGATGTTTGgagtgtagtagtagtagtagtagataactttattgtccccgtggggcagttgggtttgcggcacaatcgcaaggcactttatgacaagacatcagacatatgatataAACAAATACTCCTTGCATCAGACACCGACAGACAAGACATGACAaatatacatcacacactacaatacactatacaCCCTTGTGTATGATCAGGCCAGCTGGACGACTAGCTTATTCTGACTGATTTAAAGCTTTTATGGCTTGTGGTACGAAAGAGAATTTGGATCTGTTCTTGGTCAGAAGGGGTAGGCAGAAACGACGCATAGATGGCAGTAGTTTAAAATCTGATgccagggggtgtgtgtggtcacatacaatgttattggcctttctcaccagtctgtctttgtaaatgtgttcaatGCTCGGTAGCGTTATCCCAAGTAACTTACTGGCAGTTAAGACtgtttttctgattgtcttttTCTGAGACTCAGTGGCATTTCCGAACCAGCAGATAATACATCAAGTTAAAACACTTTCAATAAAAGCAGTATAAAACATTTGTAGCATTTTGTTATTGACATTAAAAACAAGCAGTTTCTTTAAAAAGTACATTCTTTGCTGTGTCTTAGTTTGCAAAAGATCAGTCCAAGAGTCCCATTTAAGCTTGTTGTCCAGTACAATGCCAAGGTATTTGTAGTTTGTAACAACCTGAATGGCCCCACCATTGATAAAAGTGTCGGCGGATTGCTGTGACTTTCTAAAATCTATGGACATTTCTTTGGTCTTATTGGTATTTAAAATTAAGTGTGACTTATTGCACCATTCTAAAAAGGAGTCTAAAACTGGCCCATGATCTACCTCCCCATCCTGTAGCAGACTCACTAGAGCTGTATCATCAGCATATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793053.1 True 1977 mRNA 0.43 1 17971201 17973177

Neighbor

gene id symbol gene type direction distance location
LOC120554266 NA coding downstream 1798 17967966 ~ 17969403 (-)
LOC120554256 NA coding downstream 3392 17966724 ~ 17967809 (-)
LOC120554000 LOC100690921,LOC103360025 coding downstream 93313 17862318 ~ 17877888 (-)
LOC120554260 NA coding downstream 238261 17718997 ~ 17732940 (-)
ahr2 NA coding downstream 282689 17604922 ~ 17688512 (-)
LOC120554632 LOC103360035,LOC103370267 coding upstream 56659 18029836 ~ 18102031 (-)
abi2b abi2 coding upstream 140818 18113995 ~ 18143453 (-)
LOC120554721 LOC104966233,LOC100698939 coding upstream 170800 18143977 ~ 18158300 (-)
LOC120554723 NA coding upstream 186639 18159816 ~ 18176708 (-)
LOC120554053 mpp4 coding upstream 204393 18177570 ~ 18186577 (-)
G235725 NA non-coding downstream 27704 17943210 ~ 17943497 (-)
G235724 NA non-coding downstream 30874 17934775 ~ 17940327 (-)
G235723 NA non-coding downstream 40216 17930532 ~ 17930985 (-)
G235722 NA non-coding downstream 40726 17930246 ~ 17930475 (-)
G235721 NA non-coding downstream 58034 17912867 ~ 17913167 (-)
G235743 NA non-coding upstream 12745 17985922 ~ 17986178 (-)
G235793 NA non-coding upstream 89117 18062294 ~ 18113957 (-)
G235816 NA non-coding upstream 237326 18210503 ~ 18214168 (-)
G235844 NA non-coding upstream 279647 18252824 ~ 18300953 (-)
LOC120554613 NA non-coding upstream 283766 18256943 ~ 18257506 (-)
s100b LOC103360204,LOC104927403 other downstream 225944 17734731 ~ 17745257 (-)
G235350 NA other downstream 867684 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 1215136 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 1228913 16736186 ~ 16742288 (-)
G235387 NA other downstream 1354885 16611983 ~ 16616316 (-)
LOC120554370 LOC103370263 other upstream 297901 18271078 ~ 18327103 (-)
LOC120554371 mbd5,LOC102784158 other upstream 431049 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 1550327 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 1758142 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 2394164 20367341 ~ 20368433 (-)

Expression


Co-expression Network