LOC120554312


Basic Information

Item Value
gene id LOC120554312
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 12951421 ~ 12954215 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793135.1
ctcataaagtgacattttcatgtaatgggacctttaaaacctggTATTTATGAAGCttatgtaaagtgtctttgtgATGAAATATTACTGTTCTCTGTCTTGAGGTTTAACGCCGCTACATGCAGCAGTCTTGTCTCACAACGCTGTTGTTAAAGACATGAGGAGTCTGGACAAGATTTGTTCATTTATGGAAAAGGAGCTGGAGCAGAGGACACAGAAGTATGTTGAGTGTATTAAGACTATGCTGCTCATGGGTGCCTCCTGTGGGACAAAGGATCTAAAAAGTGGAAGGACATGTCTTCACATGGCTTCTGAGGAGGCAAATGTGGAGCTGTTGAACATTTTCCTTGACCAGCCATCTTCACTGTATGTTGTAAATGTTAAGACATTCAGTGGAAACACAGCCCTGCACATTGCCAGCGCTTTGCAAAATCATAAAACTCAAGTAGAAGCAGTGAAGCTGCTGATGAGAAAAGGCGCAGACCCGGGGAGCAGGAACTTTGAAAATGACCTGCCATCTCAAATGGCGCCTGAAGGACCCGTTGGTTTAAAGGTGCGGCAGATCCTGAAAGGGAAACATTTTCATGCTTAAGTGAAGCTCAAAATCACTGTCAGTCAGACAGTCCAATCTATCATATTTATTTGCCAAACAAGGCAGATATTAGTTGTTTCAGTGAAACATGCCAAATGGTTCATTACTATGTAATGCCCACAGAGAAATAAAgatatgttttctattttttagtTTATTAACCTTTATTGCTTTAGGCATGAAGCCAATACTTTTAAGAGTGCCATACAATGAGCAAGCGTGCTCTTTAAAtctgtatgtgttgtgttttggaTAATGATTTGGGATAATTGATGACAAGTTGTTCCATAATTATGGAGGATTTAATCATGGGTTTTCTTTATTAGAATGTAAGAATATTATGCTTCATATCATTGTATTTGGAAATGCATGAACAGTTAACATGTAGATCTTTTTCTTTAAAGCATTCTATTTTGGTGTCTATAAATAGAGTcaggtgtttgtatacaaatgTATATGCATTTTTTCAAAGGCTTAATATTGTAGTTTGTGTAGAAAATGTACACATAGACCACACTACTGTAAATTTTATTGCGTGATGTTTTATCATGAATTTTCAACCTGAAATAGTCAGAGGATATTTTAATAGTCcatattttgtgtgcattttgaaaatgtgtagTTCATTTAATTTAGAAATTTTATGCAACATGTCATATTTTGAAGTAATCTACATCAAGTTAAATTAATGTAGATAGATTACATgaaacatttaacatatattgtGATGacacttgtttttctttaacaatGTATACTTTCCTAcatgtgtaaatgtttgttttaatctGAATGGTCACAATACAATAACAATGTCCCTGCTGGAGATCAATAAAGGTTTATCTCAcctta

Function

GO: NA

KEGG:

id description
ko04657 IL-17 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793135.1 True 1444 mRNA 0.35 4 12951421 12954215

Neighbor

gene id symbol gene type direction distance location
filip1l filip1l,LOC100693076,LOC102798342,LOC102213048 coding downstream 66323 12797844 ~ 12885098 (-)
LOC120554061 LOC101475634,LOC102213813,LOC107377203,LOC108242213,LOC106525271 coding downstream 307064 12602244 ~ 12644357 (-)
obsl1a obsl1,LOC102777652,LOC100691457 coding downstream 568407 12368396 ~ 12383014 (-)
LOC120554168 LOC104928316,LOC103357968,LOC104957755 coding downstream 1101598 11839717 ~ 11849823 (-)
LOC120554156 LOC104957759,LOC101074451,LOC100697446,LOC103389560 coding downstream 1227282 11718181 ~ 11724139 (-)
gk LOC100693874,LOC101471943 coding upstream 7660 12961875 ~ 12984575 (-)
trnae-uuc_66 NA coding upstream 31602 12985817 ~ 12985888 (-)
mtrf1 mtrf1,LOC104961503 coding upstream 38623 12992838 ~ 12995995 (-)
zgc:65895 tsc22d1,LOC106531085,LOC102196627,LOC106942021,LOC103477739,LOC103130603 coding upstream 66833 13021048 ~ 13048596 (-)
trnad-guc_30 NA coding upstream 102401 13056616 ~ 13056687 (-)
G234375 NA non-coding downstream 165478 12783991 ~ 12785943 (-)
G234373 NA non-coding downstream 171261 12779586 ~ 12780160 (-)
G234333 NA non-coding downstream 462413 12487905 ~ 12489008 (-)
G234330 NA non-coding downstream 464091 12436996 ~ 12487330 (-)
G234328 NA non-coding downstream 516678 12432847 ~ 12434743 (-)
G234434 NA non-coding upstream 34158 12988373 ~ 12991438 (-)
G234478 NA non-coding upstream 207517 13161732 ~ 13162096 (-)
G234490 NA non-coding upstream 245763 13199978 ~ 13200294 (-)
G234491 NA non-coding upstream 248707 13202922 ~ 13205960 (-)
G234523 NA non-coding upstream 476766 13430981 ~ 13439811 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 658278 12278519 ~ 12293143 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 1413100 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 1461944 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 1509495 11388552 ~ 11441926 (-)
LOC120554131 NA other downstream 1812176 11136627 ~ 11139245 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 1240097 14194312 ~ 14290043 (-)
G234898 NA other upstream 1893619 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 2012101 14966316 ~ 15013814 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 3294479 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 3371878 16326093 ~ 16352877 (-)

Expression


Co-expression Network