LOC120554329 (LOC100698054,LOC102783597)


Basic Information

Item Value
gene id LOC120554329
gene name LOC100698054,LOC102783597
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 18342713 ~ 18353343 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793175.1
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtaacatttttaaaaggcagATGGACGACAGCACTCCGTAGACACCTCTGGTCTCAGTCTGCAGTCCGGCTCATCCTCCGACACTCAGGCTGCTCTGACAGGGACAGAAGACACAGAGAGGAGATTCCAGTCAAAATGACTGAGCCGTACGACTGCACAGAGTGTAAGGAGTCCCTGTTTGGGCTGAAGTACATCCTGAAGGAGAACAACCCGTACTGCGTCAAATGCTACGATGATCTTTTCTCCAACAACTGTGAAGTGTGCCAGAAGCTCATCGGCTGCACCAGCAAGGATCTGTCGTACAAGGGCCGCCACTGGCACAGCGAATGCTTCCTCTGCATCACGTGCAGCCAGTCTCTGGTGGAGCGGCCTTTCGCCACCAAGGACGACCTGCTGATGTGCGTCGAGTGCTACAGCAGCGAGTACTCCTCCAAGTGCCACTCGTGTCTGAAGACCATCATGCCAGGCTCCAGAAAGATGGAGCATAAGGGCAACAGCTGGCACAAGAACTGTTTCACCTGCAACCGCTGCCAGCAGCCCATAGGCACCCGCAGCTTCATCCAGAAGGACGCCAACAACTACTGCATGCCCTGCTACGAGATACAGTTTGCTCCACAGTGCGTCACCTGCAAGAAGCCCATCACCACTGTAGGAGTGAACTACCGTGACCAGCCCTGGCATAGGGAGTGCTTTGTCTGCATCGGCTGCAAGCAGCAGCTGGCCGGCCAGCGCTTCACCTCTCGGGACGACTTTGCCTACTGCCTCGACTGCTTCTGCAACCTGTTTGCCAAGAAATGTGCTCACTGCACCGCCCCAATCAGCGGTATCGGGGGCACCAAGTACATCTCGTTCGAGCAGCGGCAGTGGCACACCGACTGCTTCAACTGCAAAGCTTGCAGCGCATCTCTGGTGGGCCGGGGTTTCCTGACGTGCAAAGACGACATCCTCTGCCCCGAATGCGTTACAGACTCCTGAGCGACCCCCTGAGCCGGGAAAGAAAGAATTTGTCTGCCAAGCGAAGTTGGCTGCCAATCAGAGAGCGCTTACATTATTCTTCCTAACATATCATGTATTGGTTCCTTACACATTAACCTGTTCTTAATGCGAGAAGGTGTTTCGTGCATGCGCTGATGatactgtgtttaaatgtaaatgagtTGAAGCCTTCATTCCAAAATGTACTTACTGAATGTATTGCTGTTTCTTAGAAAACATTCCCATTTGGAAAGCATTGCCCTAGAATCCCAGAAAATTAATTTATCTCATTTGGGAAATAacctctatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggcaacaAATAACACTATTTGATAGACGTATGAGAGCATAAGTTGTTTTAATGGAAGGCACTTTGATGGCAATTGTTTTTAACAGAGTTAATATAATACTACTAATACAGTTTATCCTAATTACATAAACTATGTTGGATTGAATAAAAAGTTTGTGGATTAGA

Function

NR:

description
PREDICTED: four and a half LIM domains protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793175.1 True 1553 mRNA 0.49 6 18342713 18353343

Neighbor

gene id symbol gene type direction distance location
LOC120554384 NA coding downstream 2294 18328508 ~ 18340419 (-)
LOC120554369 LOC104960229 coding downstream 73044 18262836 ~ 18269669 (-)
LOC120554053 mpp4 coding downstream 156136 18177570 ~ 18186577 (-)
LOC120554723 NA coding downstream 166005 18159816 ~ 18176708 (-)
LOC120554721 LOC104966233,LOC100698939 coding downstream 184413 18143977 ~ 18158300 (-)
LOC120554003 LOC103370269 coding upstream 3761 18357104 ~ 18402213 (-)
acvr2ab acvr2a,LOC102784913,LOC103371821 coding upstream 112605 18465948 ~ 18523016 (-)
kynu kynu,LOC102785701 coding upstream 1198093 19551436 ~ 19581258 (-)
bzw1a LOC107384676,LOC108245120,LOC107082828,LOC103371116,LOC101480137,LOC103457358 coding upstream 1255279 19608622 ~ 19621651 (-)
aox6 NA coding upstream 1268759 19622102 ~ 19654312 (-)
G235844 NA non-coding downstream 41760 18252824 ~ 18300953 (-)
LOC120554613 NA non-coding downstream 85207 18256943 ~ 18257506 (-)
G235816 NA non-coding downstream 128545 18210503 ~ 18214168 (-)
G235793 NA non-coding downstream 228756 18062294 ~ 18113957 (-)
G235743 NA non-coding downstream 356535 17985922 ~ 17986178 (-)
G235908 NA non-coding upstream 180104 18533447 ~ 18534684 (-)
G235929 NA non-coding upstream 243656 18596999 ~ 18597208 (-)
G235930 NA non-coding upstream 395087 18748430 ~ 18748645 (-)
G235931 NA non-coding upstream 434026 18787369 ~ 18787622 (-)
G235933 NA non-coding upstream 540564 18893907 ~ 18894507 (-)
LOC120554370 LOC103370263 other downstream 15610 18271078 ~ 18327103 (-)
s100b LOC103360204,LOC104927403 other downstream 597456 17734731 ~ 17745257 (-)
G235350 NA other downstream 1239196 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 1586648 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 1600425 16736186 ~ 16742288 (-)
LOC120554371 mbd5,LOC102784158 other upstream 50883 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 1170161 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 1377976 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 2013998 20367341 ~ 20368433 (-)
G236340 NA other upstream 2373060 20726403 ~ 20728427 (-)

Expression


Co-expression Network