prkx (prkx)


Basic Information

Item Value
gene id prkx
gene name prkx
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20208329 ~ 20234852 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793186.1
TGGTAACCGGTGTCTACTCTCTTCCTGGTTGATGTGGACAGAAGAAGTGCTGGGGTGAGGTCTGTTGTTGTAGTTGTGTAAAAACATGGAGAAAATCAGGCTATTTGGGATAGAAAAGCCAAGTGATTCACCGAGTTAATCAGCGTGTAAACGCGTATTTTACTTCGCGCTAACAGACGGTTATTTGGGCCGCTTCCTCTTCAAACCGCCACTGTTTTGACGGAGCAGCTTCCCTTTTAGCTCACGGTAGCTGATAATGCTAATGCTACCTGCCAAACAGTGCTATTACTTTAGCCAGAGTGATCTCTATGGCTCTGACTTCAGCTATCTGTagctgctaatgctaatgctaccaGCCACAAGCCAGACAGTGCACCTGTCACCGGCTTCTTTGTGCATCTCCTGTCGGTGTCTTCGTGTCCTGTTGTCTGCTATGTGTCTCAACTTGTAAACAACTAACTTGGCTTCTAattcatctgtgtttttgtcgccttttttacATTGTAGTCGCTTTTTTCGAGATTTTTCTTGCTTTTCTCGACGTTTTTGACGCTCtttctagctagctaactgtttaGTTGcgttttttgctgtttttttcagcGTTGTTCTAACTTTTTAAGGTGTTCTTGtctaaatttctttgttttagtCGTTTATTCCAACGTTTTACTCCCGTTTTCTCTACGTCTTTGTAGCTTTTGACGTTTTTAGTCGCTTTTTTAACGTTTCTTCCGACTTCATTTTGTTACATTTATCTTATTTTCCTTCCACATTGACAATAATGTCGTAgtataacaacaacaaagattGAATGACAGCTCAACACAGCCCCACTCGTTTATAATGAGTCTAGTTTTACTCTCAACGTCAATATATTTAGGAACAATTCATCAAAATTAAAGTTTGAGAAGATGAACTGAGTCCCTGCATCCAGCAGACATGTAACTGTTATAAACGGTTGTGATATGAACGGTGTACAGCGCGCGCCACTGGAGACTTCCAAACACAAACAGTTTCTAGCTTAAATCCCGAGAAGAAAGAGATGGCGTCCTCCAAAGTAAAAGTGGGAGTCAGCGGGGAGAAAGAGAGTAAAAGCAGCGGTTCTGCCGGAGGCGAAGCAACAAATACCCGGATGTACTGTCTGGAGGACCTGGAGACCGTGGCCACAGTGGGCACTGGGACGTTTGGCCGAGTCTTCCTGGTTCGGGACAGGGAGAGCCGGGCCTTCTTCGCCCTGAAACAGATGAAGATCCCCGACGTGATCCGGCTGAAGCAGGAGCAGCACGTCCACAATGAGAAGGAGGTGCTGTCAGAGGTCAACCACCCTTTCCTTATCAGACTGTTCTGGACGCACCACGACGAGCGCTTTCTCTACATGCTGATGGACTACGTGGCGGGCGGCGAGCTCTTCAGCTTCCTGCGCAGTCGTGGGCGCTTCAGCAACGCCACGGGCCTCTTCTACACCGCTGAAATCGTCTGCGCCATCGAGTACCTCCACGCCAGAGAAATCGTCTACCGCGACCTGAAGCCGGAGAACATCCTGCTGGACAGCGAGGGACACATCCGCCTCACCGACTTTGGCTTCGCCAAGAAGCTCTCCGACAGgaCATGGACTCTATGTGGGACCCCCGAGTATTTGGCTCCTGAAGTCATCCAGAGTAAAGGCCACGGCCGAGCGGTGGACTGGTGGGCGCTGGGGATCCTCGTCTTTGAGATGCTGGCTGGgtACCCGCCTTTCTTTGACGACAATCCATTTGGTATCTATCAGAAGATTCTGGCGGGAAAACTGGAATTCCCTCGCCATCTGGACTTCTACGTCAAagacCTCATCAAGAAGTTTCTGGTTATCGACCGAGCCAGACGCCTCGGAAACATGAAGAACGGAGCAGACGATGTGAAGAAGCATCGCTGGTTCAAGACAGTTGACTGGGAGTCCGTTCCTCTGAGGAAACTGAAGCCTCCCATAGTTCCCAAAGTGTCCCATGACGGAGACACCTCCAACTTTGACGTTTACCCGGAGGACGACTGGAAGAAAGATCCTCCTGTGCCTCCCAAGGACTTGGAGATCTTCAAGAACTTCTGATCCCCGAGCCCGCTTTATTTATTACAGACACAGCTCGCTATCACGGAGAGAAAACCCAGGACAGATGCATCAGATCAACTCCAGGTGATCGGTGCTGTGGATCAAACCGCAGAGATAAtttgctttttatattttaatttatccAACTTAAAAGTCTttgctgttttctttctctctgaggCTGCACGTATGCAAACCAAAAGACTGTTACTTTCTacgtttaaaagaaaaaaagagagaagaatcaggtcttttttttatattatcatgttttatattttatctcTTTTTAAACAATGTTCAGACTGGTGCTgtgactgtcagctggccagTAGTCAttaataaactgtatgtaatTTACAAAAAGCTGAGCACTTACAGCACAGTTTGATGTCTCACAGTTACAGTTCAGttgaggctacatctacactactacattttggtttagaaacaaatatcttttgctacttTTACATCTCGCATCCACTCTACAATTTTCCAAACTCCATTCAGAAAAAGTCGTTTGCCTGTCGACTTGCGGACAAACTTCGGCATACTTTGATCCGTTTATTTCTTAGAGAAGGCATTAAAATTGAGAAATATCAGCTCCTAAAAAAAGAGCCCGTGGAAACACTGCGGTTTTGGTTTGAAACTGCATATATTTTGCTACTTTTACGCCTTGCATCCGCACTACTGCTGCGTTTCCGACAGACATTTGGAAACCTCTGCCTCCTGATTTGGTCTCATCCGTTAGTTTTTGTCTCAAAGAAAACGTAGCCGTGTAGATATAGCCTGAGTTTGCTTCCACGCCTCCGACTATTTAATCTCTGTTATTACTGCAACAGCGTTCACTTCTCATCATCGTCATTGTCATTGTTGTCATGTAAGAAAGGGGGTGAAAGGTGCTGGGAACATTTAAATTGTCGCTCTGTAGAGCTACGTCACTATTCACAGTATTCACTTTATCGTGCAGAAAGCTTCTTTTCGGGACAATAATTtgggcctttaaaaaaaaaaaaaaacatgtattttgttCGCTGCCATTAAAATCAAAGTGATCATGTGA
>XR_005638373.1
ATTGGTAACCGGTGTCTACTCTCTTCCTGGTTGATGTGGACAGAAGAAGTGCTGGGGTGAGGTCTGTTGTTGTAGTTGTGTAAAAACATGGAGAAAATCAGGCTATTTGGGATAGAAAAGCCAAGTGATTCACCGAGTTAATCAGCGTGTAAACGCGTATTTTACTTCGCGCTAACAGACGGTTATTTGGGCCGCTTCCTCTTCAAACCGCCACTGTTTTGACGGAGCAGCTTCCCTTTTAGCTCACGGTAGCTGATAATGCTAATGCTACCTGCCAAACAGTGCTATTACTTTAGCCAGAGTGATCTCTATGGCTCTGACTTCAGCTATCTGTagctgctaatgctaatgctaccaGCCACAAGCCAGACAGTGCACCTGTCACCGGCTTCTTTGTGCATCTCCTGTCGGTGTCTTCGTGTCCTGTTGTCTGCTATGTGTCTCAACTTGTAAACAACTAACTTGGCTTCTAattcatctgtgtttttgtcgccttttttacATTGTAGTCGCTTTTTTCGAGATTTTTCTTGCTTTTCTCGACGTTTTTGACGCTCtttctagctagctaactgtttaGTTGcgttttttgctgtttttttcagcGTTGTTCTAACTTTTTAAGGTGTTCTTGtctaaatttctttgttttagtCGTTTATTCCAACGTTTTACTCCCGTTTTCTCTACGTCTTTGTAGCTTTTGACGTTTTTAGTCGCTTTTTTAACGTTTCTTCCGACTTCATTTTGTTACATTTATCTTATTTTCCTTCCACATTGACAATAATGTCGTAgtataacaacaacaaagattGAATGACAGCTCAACACAGCCCCACTCGTTTATAATGAGTCTAGTTTTACTCTCAACGTCAATATATTTAGGAACAATTCATCAAAATTAAAGTTTGAGAAGATGAACTGAGTCCCTGCATCCAGCAGACATGTAACTGTTATAAACGGTTGTGATATGAACGGTGTACAGCGCGCGCCACTGGAGACTTCCAAACACAAACAGTTTCTAGCTTAAATCCCGAGAAGAAAGAGATGGCGTCCTCCAAAGTAAAAGTGGGAGTCAGCGGGGAGAAAGAGAGTAAAAGCAGCGGTTCTGCCGGAGGCGAAGCAACAAATACCCGGATGTACTGTCTGGAGGACCTGGAGACCGTGGCCACAGTGGGCACTGGGACGTTTGGCCGAGTCTTCCTGGTTCGGGACAGGGAGAGCCGGGCCTTCTTCGCCCTGAAACAGATGAAGATCCCCGACGTGATCCGGCTGAAGCAGGAGCAGCACGTCCACAATGAGAAGGAGGTGCTGTCAGAGGTCAACCACCCTTTCCTTATCAGACTGTTCTGGACGCACCACGACGAGCGCTTTCTCTACATGCTGATGGACTACGTGGCGGGCGGCGAGCTCTTCAGCTTCCTGCGCAGTCGTGGGCGCTTCAGCAACGCCACGGGCCTCTTCTACACCGCTGAAATCGTCTGCGCCATCGAGTACCTCCACGCCAGAGAAATCGTCTACCGCGACCTGAAGCCGGAGAACATCCTGCTGGACAGCGAGGGACACATCCGCCTCACCGACTTTGGCTTCGCCAAGAAGCTCTCCGACAGgaCATGGACTCTATGTGGGACCCCCGAGTATTTGGCTCCTGAAGTCATCCAGAGTAAAGGCCACGGCCGAGCGGTGGACTGGTGGGCGCTGGGGATCCTCGTCTTTGAGATGCTGGCTGGgtACCCGCCTTTCTTTGACGACAATCCATTTGGTATCTATCAGAAGATTCTGGCGGGAAAACTGGAATTCCCTCGCCATCTGGACTTCTACGTCAAAACGGAGCAGACGATGTGAAGAAGCATCGCTGGTTCAAGACAGTTGACTGGGAGTCCGTTCCTCTGAGGAAACTGAAGCCTCCCATAGTTCCCAAAGTGTCCCATGACGGAGACACCTCCAACTTTGACGTTTACCCGGAGGACGACTGGAAGAAAGATCCTCCTGTGCCTCCCAAGGACTTGGAGATCTTCAAGAACTTCTGATCCCCGAGC

Function

symbol description
prkx Predicted to enable cAMP-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation and signal transduction. Predicted to act upstream of or within protein phosphorylation. Predicted to be part of cAMP-dependent protein kinase complex. Orthologous to human PRKX (protein kinase X-linked).

NR:

description
PREDICTED: cAMP-dependent protein kinase catalytic subunit PRKX

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K19584 PRKX; protein kinase X

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793186.1 True 3152 mRNA 0.45 8 20208331 20234852
XR_005638373.1 False 2039 transcript 0.48 7 20208329 20233795

Neighbor

gene id symbol gene type direction distance location
LOC120554034 NA coding upstream 173600 20029026 ~ 20034729 (+)
LOC120554605 pudp coding upstream 356375 19839605 ~ 19851954 (+)
LOC120554006 NA coding upstream 376121 19819866 ~ 19832208 (+)
LOC120554574 NA coding upstream 389846 19816765 ~ 19818483 (+)
sts sts coding upstream 475786 19712684 ~ 19732543 (+)
mxra5a NA coding downstream 23491 20258343 ~ 20271296 (+)
fam207a NA coding downstream 77672 20312524 ~ 20341903 (+)
LOC120554617 LOC108431163 coding downstream 88640 20323492 ~ 20325622 (+)
gyg2 NA coding downstream 174160 20409012 ~ 20419118 (+)
LOC120554612 rcan1,LOC103389732 coding downstream 225122 20459974 ~ 20480326 (+)
G236199 NA non-coding upstream 393 20207730 ~ 20207936 (+)
G236196 NA non-coding upstream 22449 20185653 ~ 20185880 (+)
G236189 NA non-coding upstream 113450 20094348 ~ 20094879 (+)
G236187 NA non-coding upstream 125048 20083028 ~ 20083281 (+)
G236179 LOC104947167 non-coding upstream 137689 20070106 ~ 20070640 (+)
LOC120554047 NA non-coding downstream 48304 20283156 ~ 20284898 (+)
G236258 NA non-coding downstream 63524 20298376 ~ 20298640 (+)
G236260 NA non-coding downstream 99509 20334361 ~ 20334970 (+)
G236268 NA non-coding downstream 143573 20378425 ~ 20380497 (+)
G236304 NA non-coding downstream 276822 20511674 ~ 20511988 (+)
G236162 NA other upstream 210662 19996799 ~ 19997667 (+)
nlgn4xa nlgn4x,nlgn4a,nlgn4,LOC102297792,LOC102198379,LOC102795219 other upstream 221600 19897092 ~ 19986729 (+)
anos1a LOC103358938 other upstream 509434 19671872 ~ 19698895 (+)
G235778 NA other upstream 2026517 18176825 ~ 18181812 (+)
G235775 NA other upstream 2036375 18167286 ~ 18171954 (+)
LOC120554192 adarb1,dhrsx,LOC103363325,LOC104961879,LOC106908010,LOC106908011,LOC103156197,LOC103156196 other downstream 120450 20355302 ~ 20377740 (+)
cd99 NA other downstream 148466 20383318 ~ 20406326 (+)
LOC120554724 plcd4,LOC103363317 other downstream 252815 20487667 ~ 20511076 (+)
LOC120554627 runx1,LOC104961881 other downstream 360243 20595095 ~ 20635922 (+)
fmnl2b LOC101465085,LOC102790854,LOC102292591,LOC106517599,LOC100693318 other downstream 534624 20769476 ~ 20841778 (+)

Expression


Co-expression Network