LOC120554369 (LOC104960229)


Basic Information

Item Value
gene id LOC120554369
gene name LOC104960229
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 18262836 ~ 18269669 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793235.1
TGGTTTAGCTACTAGCTTGCCAGACGATTTATATGCCGGAAGTAATTGTAAACAAACAGCAACTTTGGTCATGCATGAAAGTGGTAAATGTTTGACGTTAGTCGAATAGCAAAGAAGTACAACAGCGACCTATTTACGGTGGTGAACATGGAAGACGAAGAgcggctaacgttaacgttacaggtCGGAGGGAACCCGGACTGGATGTCACGTCTGCCCGAGCGCCTGCTGGATGTCCCCCTGTGGAACCTGGCCATACCCGGGAGCCACGACAGCATGTCTTTCTGTCTGGACGTGTCCTCTCCGGTCCTGAGATCACAGCCCTGTCTCCTCCGGGTCATCGACCGGCTGTTCCCCTGCTGGACCCGACCCTGTGTCTACCGCTGGGCCACCACACAGcaatcGGTCCTCAGCGATCAGTGTGATCTCGGTATCCGTTTCTTGGACCTGCGGATCGCCAGGAAGCCAGCAGGAGGCAGCAAATTATTCTTTGCCCACGGCATCTACACACTCATAACTGTGAAGgagGCTCTGGATGAACTGGCTACCTGGTTGGACGCTCATCCGAAAGAAATCGTAGTCATTTCCTGCTCGCATTTCGAAGCGCTGACCGACGAAGATCACTTCCACCTCACCGACTACATCATCACGCTGTTCGGGAAGAAACTCTGCTCCTCGGAGGACATTCCCACTCTGCGTTCCTGTTGGTCCAGAGGCCAGCAGGTCGTTGTTTCCTATGGCAACCAGCAGATGGTGCTGCAGCACCCCGAGCTGTGGACTGGAATACCTTACTGGTACGCCGACAGCGCAGATCCTAACAAGGTGATTGCCTACTTGGAGGACCAGCAGCACAGAGGAAGACCAGCTGGTTTTTACGTCAGCGGTCTGAACCTGACCGAAGACGCTGCGTACGTCCTCCGCCAGGACATGAGGAAGATGACGACGAGGGCTCTGTCCCTTCTGCTTCGCTGGGCCGGCGAGCAGCAGCCGGGACGGCAGGCGGGCGGGGTCAACATCCTCTGCTGCGACTTTGTGGACGTCAGTCCATTCTGCTCGCTCGTGATCGGCCTAAACCACAAACTGCTGGCGGCGACGCCTCCTGTCTGCAGGATGCCGCCGCGAGCATCTCGCTCGCATGTCATTGGCTGTTGTCATAGCAAACAGACTGGAGATTCAACGTAGGAAAACGCATCGAACTCCGATTCTCCACTGGGCCCTTCTGCGCTGCGtttgtccattaatacctgacgacagacacctcgtcgggcattaaacCGCTTACACCATGgccacttgccaaataacatattttta

Function

NR:

description
PREDICTED: PI-PLC X domain-containing protein 1-like

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0008081 phosphoric diester hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793235.1 True 1314 mRNA 0.55 7 18262836 18269669

Neighbor

gene id symbol gene type direction distance location
LOC120554053 mpp4 coding downstream 76259 18177570 ~ 18186577 (-)
LOC120554723 NA coding downstream 86128 18159816 ~ 18176708 (-)
LOC120554721 LOC104966233,LOC100698939 coding downstream 104536 18143977 ~ 18158300 (-)
abi2b abi2 coding downstream 119383 18113995 ~ 18143453 (-)
LOC120554632 LOC103360035,LOC103370267 coding downstream 160805 18029836 ~ 18102031 (-)
LOC120554384 NA coding upstream 58839 18328508 ~ 18340419 (-)
LOC120554329 LOC100698054,LOC102783597 coding upstream 73044 18342713 ~ 18353343 (-)
LOC120554003 LOC103370269 coding upstream 87435 18357104 ~ 18402213 (-)
acvr2ab acvr2a,LOC102784913,LOC103371821 coding upstream 196279 18465948 ~ 18523016 (-)
kynu kynu,LOC102785701 coding upstream 1281767 19551436 ~ 19581258 (-)
LOC120554613 NA non-coding downstream 5330 18256943 ~ 18257506 (-)
G235816 NA non-coding downstream 48668 18210503 ~ 18214168 (-)
G235793 NA non-coding downstream 148879 18062294 ~ 18113957 (-)
G235743 NA non-coding downstream 276658 17985922 ~ 17986178 (-)
G235725 NA non-coding downstream 319339 17943210 ~ 17943497 (-)
G235908 NA non-coding upstream 263778 18533447 ~ 18534684 (-)
G235929 NA non-coding upstream 327330 18596999 ~ 18597208 (-)
G235930 NA non-coding upstream 478761 18748430 ~ 18748645 (-)
G235931 NA non-coding upstream 517700 18787369 ~ 18787622 (-)
G235933 NA non-coding upstream 624238 18893907 ~ 18894507 (-)
s100b LOC103360204,LOC104927403 other downstream 517579 17734731 ~ 17745257 (-)
G235350 NA other downstream 1159319 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 1506771 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 1520548 16736186 ~ 16742288 (-)
G235387 NA other downstream 1646520 16611983 ~ 16616316 (-)
LOC120554370 LOC103370263 other upstream 1409 18271078 ~ 18327103 (-)
LOC120554371 mbd5,LOC102784158 other upstream 134557 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 1253835 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 1461650 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 2097672 20367341 ~ 20368433 (-)

Expression


Co-expression Network