LOC120554377 (LOC103355861)


Basic Information

Item Value
gene id LOC120554377
gene name LOC103355861
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 14966316 ~ 15013814 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793253.1
GAGGACGAAACAGTTCCTACCCGGACCGGCAATGAGACGCACACTTAAACATGGCGGCCAACATAGAGCAGATTTTCCAAGATTTTATATTGAATAAAATCAGGGAAATAGAAGACCAGAATGAAGACAAAACTGCTGCCGAAGGAGATAATGTTAATGGCATTGAAATGGTTGGAGCAGAAAAAGCCCCTTCGGAGATAGACAAACAGGACGACTTAAGGGGCAGTGGttcacaaaagaaacaaaagaagcacaaaaaacacaaaagcaagaagaagaggagaaaccGAGAAAAGGAGGAGGCGAAGAAGAGCAGTTCGGAGTCTGGGGCAGAATTGGAGGGAGGAACCAACCATCAGCCAAGAAGAAGAACGCCAACGGAGGTGAATAAGGAGCAAGGTGAGGATAACGAGAGCAAGTCCAGATGCCACAAGCggaaaggaaagaggaagaagaagaagaagaagaagagaaggaggaaagGTGACGAGAACTCATCAGATTCCGACTCAGAGTTCGTGTCAAAGCAGAGGGAGAGTAATTGTGGTGAAAGCTTATTGCCAAGGCGACGAGAGGAGCTTCCTGATATCATCCCAAAACAGGACAGCTCCATTAAAGGAAGAGGAGATGAGGAAAGACACGGCAGGAGAAGTTTCCGTTCCCGTTCACGGTCACATTCCTGTTCTCATTCACATTCAGTTAGGAGGAACTCTCGGTCTAGAGACCACCACCGGAGGTCTAGGACTCGCTCCCTATCCAGTACACAGCGCCACAGGACTCGGTCcagCTCTTCAGAGAAGAGGGGAGCTTTGGATGAACCCACACCGTCCACCCAATGTCCTTTAAAAGGCCTCCAGCCACCTGAGCTGGCCTCCAGTCCTACCCGAAGTAACATCAAAGCACAGGAGCTGGCAGAATCAAGCACAGAGCTGCAGAGTCCTGACCAGATGGAAAAGCCACCAGAGAACAAAGAAGATAAAGCAGACGACTCGACACAAAAACTAGGTTCTGCCGCACCCCACTCCATGATGAGCCAGTCCATAGCTACTGAACCTGACCAGACCACTGAGCTCAGCTTGCCTCGGATTAAAGCATCAAAACACCCGAGTACATCTGACACTAATGTTAAATTGCCAGCAATGATGAAGAGGAAACCATCCAAGTCCCCACAGAGGAAAAAAGAATCAAAGTCATCAAAGAGGCAGAAAAGATCTAAGTCACCATGTAGGAGCCACAGGAGGGGATCCAGATCCAGGAGTCCTTCAAAGAAGAAGAGGTCACGGTCGAGGTCAGGGGGCCGGCGGTCGCGGAGGTCGCGCTCACGGTCGGTGTCGAGGGGTCGGAGGAGGGCTACATACAGCCAGAGGGACCGCTGGAAACGAGAGCCAAGTCACTCCCCTGTACTCATCCTCCGCAAAAATAGATCCCCCACTCGGAAACTCTGCAGTTCGAGCAACAGCCCTCAACGCATCAGTGAACTGGATAAGGACCAGTTGTTAGAAATTGCCAAGGCCAATGCTGCTGCCATGTGTGCCAAAGCAGGAATGCCCATCCCTGCCAGCCTGAGGTCCACAGTGCTTCCCCTGTCTCTGCCCAGTATGGCCATGAATGCTGCTATGGCCAGTATGACGGCCGCCACCATGACAGCGGCGTTGTCCAACATGGGCATGTCGTCATTGCTCCCGTTGCCCTCCATTACCAACAAGCCCCCTCCTGTCTCAACGCAACCCAACACTGCTGCTTTGGAGGAAGTGAAGAGGAAAGTAGCGAAGCAGGCCAACAGCATCAGCATTAAGGAGTTTACTGATAAATGCAAGATGATTGTGGACAGTAAAGGAGAGCTGCCGGTGGCAATGCCTCATGTTTCAGACGAAGAGGATGATGGGAAGCCTTTTGGAGGATCAGCTCTTCGAGAGCAAAAAGCCATCAGCTTCAGCATCAACAACACCACAGTACGGCCAGCAGTGCGTAGCGACGCAGGCATGGCCAAGGAGTTTCCTGTGTCTTCCGGATCCCAACATCGTAAGAAGGAGGGCGAGGCACTGGGGGCCTACGGAGAATGGGTTCCAGTCGACAAAACATCAGACAAAGCTGCAGCTGCCTCCAGGAAAGCCGGGACCACTGTTCCCATAGCGACAGCTACCTCATCATCAGGTGAAACGAAGACAGCACCAGGGTTAACGGAGGTTGTCGAACAGCCTGTTTGTGTGCTAGATAATGACAGCGTTTTTCCTGACCCACTACTGCAGcCAGTAGATATTTCTCAGGCTGTAACTGAGAGAATCAAAGCTCAGAGGCGATTGGCTGAGAACCCCTATGATGTCAATGCTATCTGCATGCTTAGCCGGGCACAAGAGCAGGTGGATGCGTGGGCCCAATCCAATACTGTTCCTGGTCTTTTCACTGGTTCGACTGGAGCCCAGGTCCTCAGCTCGGAGGAGCTTTCTACCAGCGGACCACAAGCATGGCTGAAGAAGGACCAGTTCCTCAGGGCAGCTCCAGTATCAGGGGGTGTCGGGGAGTTCCTGATGAGAAAGATGGGCTGGAAGACCGGAGAGGGCCTAGGGAGGAACCGCGAGGGCACCGTGGAGCCAATCATAATTGACTTCAAGGTCGATCGCAAAGGACTAGTTGCTGAAGGAGAGAAGCCACAGAAGCAGACAGGAGGACTGGTGGTAACCAAGGATCTAATGGGGAAGCACCCGGTGTCTGCTCTCATTGAGCTGTGTAACAAGAGACGGATAATGCAGCCAGACTTTGTCATGGTGCATCACAGTGGTCCCGACCACCGAAAGAATTTCCTCTTCAAGGTCACAGTGAATGGCGTGGACTACCAACCCCAGACAGCTAGTCCCAATAAGAAACACGCCAAGGCCATGGCAGCTACCGTTGCACTGCAGGCTCTGGGAGAGGTTCCTGTTGATGGACCAGGACTCTACACTGGCCCTGTCTTCACTGCCGCGTCTACTGGCCCCCTGTTTTCTACATAGACACCCACACAATAGAGGGACTGACACATTCTCCATAGTTCAACTGTTGGACTATGTTCTGTCTTCAGTCGTGGGACATTGACAGAAAGGGATTTTTGAGTCCCGCTAAATAACCGGTCCATCATTTCCACTCTGGTCACTTATTTATACAGTATGCTAAGGACCGAACAAATACTCTAGGCACAGGACAGTGAGAACCATGAAGACCAGTCTTGGCTTCACATGACACCTGTGACTGAATTTATACCCTTCAaagttacattttcttttaaactaCGTTCCTGACAGAGTGGCAAATACTTTTTTTGCTGGGTTTTTAGAATTGCGAAAGAGTCTCCACCATATTAAAAGTGGAtggcatgtatgtatgtatatatgtatgtatgtatgatataGTAGCATTTCAGCCTGATATATATATTAGCTGACCAATACTTTAGTATAACCCTAGAACAGACACGAGTTTCATAGCAATGGATTTGTTGTTGGTCGCTGACATTGGAAAAAATGAACAATGTATCTGTAAATGCCTGTGTCCTGTTGGTTAACTTTTCTGTTGGTCCTGATATTACATTTGTGGCCTGGCctctttcttaaaaaaaaaaaaatgtttctcatACAAGAGGCTTTTAAATTTTATGGAACTAACCCTCTAAAAATGTGTAAACTGAATAAAGATTATATTTATGTTATGTAGTAGAGGAagccaaaatgtgtttttggcaaAAGAAATGCCTGTGTTTAATGTGATTTCAGCTTCTTATCAGTGTCACCGTTTATACGACTTAGCAGGGTTCTGACCTCCATTTCAGCCCTCCAGTACACACACGAGTTGTGTCCGCTGCTTCTTTTTCACTCGCCAGTGAAGAGATTCACTGGGCGTTGAAAATGCATTTGTGATTTTCAACCAGCAGGAGTCCATAATGCAATGACACCATCTCTCACCATCTTCCCATCTGTAAACACTGCCAGATGTTTTAGAGCTTCTCAGTATGAGCACTACGGCTGAGCGTTGAAGCTGGGGTATCTGCTGTGGTTGGCAAGTGCTGACACCCAGTCCACTGATTGTGTAAAGTCATAATTTACTCTTGTattctgatgaaaactgattCCCACACAAAATGTTTTACCCATAAAAAAATACTTCGATTGACCTTTTCTTTTTGTGAAGAAGTGTACTATCCCAAATGGATAAAACATGACTACTGACtataaaaaaatctgttttattcTGAGCATACTGTATGTAAGGCAGGTGTGGAGAATATTCCTAATctgtcaaactttttttttttgtatttctgacCAAGGTACGATCTCTACTGTTGCTCTTTTAAGTATAAGTGATACAGTTCTATATGTTTCTTATTGTTAACAAATCTAATGAATAGACCAAAGCCAACAAAAAACTGAGCCTGCTGAGAAGTATTATGTACGGAAGCCCTGAGAGGCAACTGAGAAAAGAAATTGTGATGATCCATTTTCCAAGTCTGATCTAAAttgttttctctcctgtttATGACATAAGCATAGGTGAATAAAAGGTTTTGCCAGAA
>XR_005638386.1
GAGGACGAAACAGTTCCTACCCGGACCGGCAATGAGACGCACACTTAAACATGGCGGCCAACATAGAGCAGATTTTCCAAGATTTTATATTGAATAAAATCAGGGAAATAGAAGACCAGAATGAAGACAAAACTGCTGCCGAAGGAGATAATGTTAATGGCATTGAAATGGTTGGAGCAGAAAAAGCCCCTTCGGAGATAGACAAACAGGACGACTTAAGGGGCAGTGGttcacaaaagaaacaaaagaagcacaaaaaacacaaaagcaagaagaagaggagaaaccGAGAAAAGGAGGAGGCGAAGAAGAGCAGTTCGGAGTCTGGGGCAGAATTGGAGGGAGGAACCAACCATCAGCCAAGAAGAAGAACGCCAACGGAGGTGAATAAGGAGCAAGGTGAGGATAACGAGAGCAAGTCCAGATGCCACAAGCggaaaggaaagaggaagaagaagaagaagaagaagagaaggaggaaagGTGACGAGAACTCATCAGATTCCGACTCAGAGTTCGTGTCAAAGCAGAGGGAGAGTAATTGTGGTGAAAGCTTATTGCCAAGGCGACGAGAGGAGCTTCCTGATATCATCCCAAAACAGGACAGCTCCATTAAAGGAAGAGGAGATGAGGAAAGACACGGCAGGAGAAGTTTCCGTTCCCGTTCACGGTCACATTCCTGTTCTCATTCACATTCAGTTAGGAGGAACTCTCGGTCTAGAGACCACCACCGGAGGTCTAGGACTCGCTCCCTATCCAGTACACAGCGCCACAGGACTCGGTCcagCTCTTCAGAGAAGAGGGGAGCTTTGGATGAACCCACACCGTCCACCCAATGTCCTTTAAAAGGCCTCCAGCCACCTGAGCTGGCCTCCAGTCCTACCCGAAGTAACATCAAAGCACAGGAGCTGGCAGAATCAAGCACAGAGCTGCAGAGTCCTGACCAGATGGAAAAGCCACCAGAGAACAAAGAAGATAAAGCAGACGACTCGACACAAAAACTAGGTTCTGCCGCACCCCACTCCATGATGAGCCAGTCCATAGCTACTGAACCTGACCAGACCACTGAGCTCAGCTTGCCTCGGATTAAAGCATCAAAACACCCGAGTACATCTGACACTAATGTTAAATTGCCAGCAATGATGAAGAGGAAACCATCCAAGTCCCCACAGAGGAAAAAAGAATCAAAGTCATCAAAGAGGCAGAAAAGATCTAAGTCACCATGTAGGAGCCACAGGAGGGGATCCAGATCCAGGAGTCCTTCAAAGAAGAAGAGGTCACGGTCGAGGTCAGGGGGCCGGCGGTCGCGGAGGTCGCGCTCACGGTCGGTGTCGAGGGGTCGGAGGAGGGCTACATACAGCCAGAGGGACCGCTGGAAACGAGAGCCAAGTCACTCCCCTGTACTCATCCTCCGCAAAAATAGATCCCCCACTCGGAAACTCTGCAGTTCGAGCAACAGCCCTCAACGCATCAGTGAACTGGATAAGGACCAGTTGTTAGAAATTGCCAAGGCCAATGCTGCTGCCATGTGTGCCAAAGCAGGAATGCCCATCCCTGCCAGCCTGAGGTCCACAGTGCTTCCCCTGTCTCTGCCCAGTATGGCCATGAATGCTGCTATGGCCAGTATGACGGCCGCCACCATGACAGCGGCGTTGTCCAACATGGGCATGTCGTCATTGCTCCCGTTGCCCTCCATTACCAACAAGCCCCCTCCTGTCTCAACGCAACCCAACACTGCTGCTTTGGAGGAAGTGAAGAGGAAAGTAGCGAAGCAGGCCAACAGCATCAGCATTAAGGAGTTTACTGATAAATGCAAGATGATTGTGGACAGTAAAGGAGAGCTGCCGGTGGCAATGCCTCATGTTTCAGACGAAGAGGATGATGGGAAGCCTTTTGGAGGATCAGCTCTTCGAGAGCAAAAAGCCATCAGCTTCAGCATCAACAACACCACAGTACGGCCAGCAGTGCGTAGCGACGCAGGCATGGCCAAGGAGTTTCCTGTGTCTTCCGGATCCCAACATCGTAAGAAGGAGGGCGAGGCACTGGGGGCCTACGGAGAATGGGTTCCAGTCGACAAAACATCAGACAAAGCTGCAGCTGCCTCCAGGAAAGCCGGGACCACTGTTCCCATAGCGACAGCTACCTCATCATCAGGTGAAACGAAGACAGCACCAGGGTTAACGGAGGTTGTCGAACAGCCTGTTTGTGTGCTAGATAATGACAGCGTTTTTCCTGACCCACTACTGCAGcCAGTAGATATTTCTCAGGCTGTAACTGAGAGAATCAAAGCTCAGAGGCGATTGGCTGAGAACCCCTATGATGTCAATGCTATCTGCATGCTTAGCCGGGCACAAGAGCAGGTGGATGCGTGGGCCCAATCCAATACTGTTCCTGGTCTTTTCACTGGTTCGACTGGAGCCCAGGTCCTCAGCTCGGAGGAGCTTTCTACCAGCGGACCACAAGCATGGCTGAAGAAGGACCAGTTCCTCAGGGCAGCTCCAGTATCAGGGGGTGTCGGGGAGTTCCTGATGAGAAAGATGGGCTGGAAGACCGGAGAGGGCCTAGGGAGGAACCGCGAGGGCACCGTGGAGCCAATCATAATTGACTTCAAGGTCGATCGCAAAGGACTAGTTGCTGAAGGAGAGAAGCCACAGAAGCAGACAGGAGGACTGGTGGTAACCAAGGATCTAATGGGTCTTGGAAGAAATGTAAGGACTAAATTAATCCACAATCCACTGAGAATAAGGCAAGAAGCAGCCACAAAACAGCTGAGACAAACTGCGAAATCATGCAGGCAGCACGCCAACAACAAGGGAAGCACCCGGTGTCTGCTCTCATTGAGCTGTGTAACAAGAGACGGATAATGCAGCCAGACTTTGTCATGGTGCATCACAGTGGTCCCGACCACCGAAAGAATTTCCTCTTCAAGGTCACAGTGAATGGCGTGGACTACCAACCCCAGACAGCTAGTCCCAATAAGAAACACGCCAAGGCCATGGCAGCTACCGTTGCACTGCAGGCTCTGGGAGAG

Function

NR:

description
PREDICTED: protein SON-like

GO: NA

KEGG:

id description
K23718 SON; protein SON

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793253.1 True 4546 mRNA 0.47 20 14966316 15013814
XR_005638386.1 False 3031 transcript 0.52 20 14969522 15013814

Neighbor

gene id symbol gene type direction distance location
gucy1b2 LOC103355875 coding downstream 2345 14935720 ~ 14963971 (-)
trnar-ccg_4 NA coding downstream 3883 14962361 ~ 14962433 (-)
chrm4a LOC104937647,LOC103355860,LOC100699420 coding downstream 41972 14878558 ~ 14924344 (-)
LOC120554575 NA coding downstream 351417 14601155 ~ 14614899 (-)
LOC120554302 ube3a coding downstream 396406 14545740 ~ 14569910 (-)
LOC120553991 NA coding upstream 78390 15092204 ~ 15098640 (-)
LOC120554257 NA coding upstream 588501 15602315 ~ 15611660 (-)
LOC120554251 NA coding upstream 609338 15623152 ~ 15633620 (-)
LOC120554239 NA coding upstream 622616 15636430 ~ 15654565 (-)
LOC120554219 NA coding upstream 658323 15672137 ~ 15677967 (-)
G234896 LOC103355859,LOC104964875 non-coding downstream 137907 14806632 ~ 14828409 (-)
G234828 NA non-coding downstream 366030 14599136 ~ 14600286 (-)
G234802 NA non-coding downstream 423996 14537841 ~ 14542320 (-)
LOC120554079 NA non-coding downstream 482287 14477426 ~ 14484029 (-)
G234752 NA non-coding downstream 609916 14356095 ~ 14356400 (-)
G234927 NA non-coding upstream 73136 15086950 ~ 15087401 (-)
LOC120554280 NA non-coding upstream 175944 15189758 ~ 15190653 (-)
LOC120554270 NA non-coding upstream 294694 15308508 ~ 15309289 (-)
G235029 NA non-coding upstream 352594 15366408 ~ 15366892 (-)
LOC120554282 NA non-coding upstream 354443 15368257 ~ 15369022 (-)
G234898 NA other downstream 116579 14847834 ~ 14849737 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 676273 14194312 ~ 14290043 (-)
G234405 NA other downstream 2012191 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 2673173 12278519 ~ 12293143 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 3427995 11524382 ~ 11538321 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 1234880 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 1312279 16326093 ~ 16352877 (-)
G235387 NA other upstream 1598169 16611983 ~ 16616316 (-)
LOC120554263 NA other upstream 1722372 16736186 ~ 16742288 (-)
trnat-cgu_19 NA other upstream 1742179 16755993 ~ 16756065 (-)

Expression


Co-expression Network