LOC120554384


Basic Information

Item Value
gene id LOC120554384
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 18328508 ~ 18340419 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793268.1
TTGTTTGGCGtacaggaagtgtgtgtggcCGTGTCCAGCCTTTGCCTGCAGAATTGAAGGAGCTAACGGCATCTAATTGCAGCAAGCCGCTCAGTAATTGcaacgaaagaaaaaaaacatataacATTGTCAAATGTCTTCAGGTGATATGAATACCGCTGTACCCAACCATCGAAGGACCAAGCCTGGCGGTATAAAGACTGGGGTTGTGGCCAGCGGCATGACTGGACCGACCTCCCAGATCCCCGGTCTGTCCCAAACGGCAGACGAAACCTCTCCGGTGGAACGGACCACCGGCCGGCGAGTTGGGATCTTTGAGTCGGACTCGGAGTATGTGAAGCTCGCAAAGGGAGGTGGACACAAAGggcTGCTGAGTCATGATGCTGACTCTGATGACAAACCCATGAAGCCCTACAATCCACCCAACTGGTTTGGTGATGAATTAAAGAGCGGGAGCAAACCAACCTCTCCCGACAGCAAGATGATGGGGGGCATGCAGCCCCTGGCTGCACCGTTTGGCACCGATAACGGTTCGTCCTGGGAAAGAGATGGTAGATTTTCCCCCAATAAGGAGAAGATGTCTCCTGATGAAGTTGCCGATGAGCTTGGTGGTCTGTCCATGACCAACAAATACAAGCGAACGTGTTATGAGAAGAAGGCTCCTCCGGTCAGCATGTCCAAGCTGCTGAGTCATGGCTATGTCGAGGACAAGAAGAAGTCTCCTAATGATGACGATGCCTCAAGTGTGACCTCAGATCAGACCAGCACCGTTGAGACGGAGGACAATGGCGACGACCTGGAGTAGTGCATACAGGTTCTGGTCTCGAGGGAAACGGGGGTCGTCCCAACACTGGTTTATGGTTTCCACAAATCCACGAACACACCGCTCCGCCCCTCTCGGTTTCACTCGCATCTATTGTACATCCACTGACTGTTAGGTTTTGTACTCATGTTTATGCAAAGGTactgctctttttatttatttgctttcatctgtaaaaaaaagtattcacaCAGATTTTGTTGAGTAGATTGTGTCCGTTGTGCTCGCGGTATTTGTTATCTGTGTTGTCGTTTCTCGATTTGAAAGACGAGTTGTGCACAGGGCAGGAAACTAACGAATGTTGGGTCCATAGGGTTGAGTGAAAAATAACTATTTCCCCAGCTAGTTAGCTAGACGGCTGTGCCAGCCGAAAGCTTTTTTTTTGACTGGTGTTAGTTTCCTTCCCTGGTTGTATGAAGATCGAGCTAGTGAAGTTAAAAAATGTTAGTGCTAATGAAATGTGGTTCCAGTGACGTGAAATATAATTTGTTTTGATCGAGGGTTCCTGCTCTCTGAAGGGAtgttcagagtttttttttttttgtgttttcgactgtggggggggggtggaaaCAATCATTCGTTGAGACAGCCACCCTGCAGCTGTGACCACATGCCAAAGTGTGTACTGATGGCCACAGCCGCCGTGCTTTGTTTGGTTCAAGGGccaaagatgatttttttttttgtttttttttgtaaggttGCTGCTCTGCAAAAGGTCTCTACTAAACCACCcacatttctgttgtttttgactCCGTAAAAATCGAACATGCCTCGTTTTATTGTGCATTTTTATGAAAGCTTTTACTCCCAATTATCATAATAAAAGCCAATTTGGAAGAAAAATACCTCGTGTTGAAACACTAAATTAACTCGTGATGTTTACACGGCTATTTTGAACACTATCGGGTGCTGCAAGATCaatttcctcgccactgtttaTTAGGAAGTAAATCGCTAATAATGCCAAGTGTTTCGATGGCAGTCCAAGTATCTCAGAAGCGTGCTAATGTTCTAACTGAATTGGGTCAACTCTACATGTTAAAGCTCTCCAGTGTTCACTTAATTGCGTTCTCATTCAGCCCGGTAAACCCGAAACTCGTGCAACAACCCATAAGTATTCTAGGAAATTTAAGGGGAAATGGCCACCTTTAGCAGACTGCCAAGCTGAAAGTCCGGTCCAGTGTATTTCCCTGTGAAGATTAAGGCGTGATTTATGCTGCTGCGTTAAATCTACGCTGTAGcttacggcgaaagctctgcatggagcctctGCAGAATCATGAATCACGCTTAAGGCGgacaacttttaaaaaacaaagtgaGTTCTGAACGTGCCAAccaagcagtttttttttgtctgctcaTGCAGTGTTTTGACTTTATAGACATCAGTAGGAGAACTTAGTGTTAGTGTACAGCCCGATCACACCAAAACCCTCCATTAATGTCGTGTTTATCCATCTGATGGGAGTTTATTCAGTTAAGATGAGAGAAATGGTTACTGGTACAGCATTGTTGCATATGAAAACTTTCCGTTTCTGAAGCAGTGGAAAAGCCTGCTCATCGAGTGGTTAAGATATTCTAAAAACATACTTATAGAATAAAGGTCTGTCTCGAATAAAAGTCTGCCAACCAGAGACAAGGATGTCCTCTACATCTGCGATATTcattcttttaaaaacaaaaaaacttagaTTTTTAGATTAGTATTAAAAGTTCCTTTTTTTATTAGTAGTAATCACTCTCAGTATTGCTAGCGACAGTAGCTAGGAAGCTCATTGTCTCATAATGAGCAAATGTCGATTTTAGCAACAACTTAATTAAGCTTAATTGCTAATCGGTTAATACATTCCATCTATTTTCTTCCACCAGTCTGCATCCCGTTTGCGTTCATTTGATTGATTCTATCATTAGGATTTATTGATGTATACTGCTGGAATTTTTTGCGGATGTTTGATAACGATTTTTAAGCCTCATCCTCCCTACTGGTTTCCATCATACTTTGACACTTCAGTGAGTCAATCCAGTACGATTGTGAAACGGGTGGCAAATGTAACTCGTGTGGTATTAATTAGGGCTTCAATTTACCCTCGTTAACCTCTGCAGAAACACTTTTCAACAGAAGTGTGCcttttgttttactgtttactTTGCAGAAATCccgattttttttaagttcacacacatacaagttTAGAGTGCTCACACAGTTGGCCTTACTGCTCCGAAACCACCGCAGACAATGGGAGTCATTATTCCACCTCTTTGTCCCCTGCTTATTTGTGGGGTTGCGTATTTCGTTTGTCAGTCAGGATATctcaaaaaaaaggtaatagaTTTCATTCCTGTGACATTTCTAGACAGTTCAGCCTTGAGTCATTTAACAGTTATATAATTTCTTCGCCGTAACGGTGAACCTGCACAGTGACAGTAAAATCCTAATCCTACAGGGACATTTGTCGGGCGGAGAAAATGctcttaaaaatgaaaagacGAGGAATGAATTATTTGGGCGTATAACAGCAAGATTAAAGCTCTGAGTCTGTTCCCGTAAATCCAACACGTTCATCACCTTGCGTCTCAGAAATGATGCAGCAGTAACagacttgtttgtttgtttgtcactTTGTTTCCAACACTATATATTTACGCAATGATGATGCATAATTGATCTGTATGTGGTATTAAACGTTGTCAAGTGTTCAAAACTAGACGCACTGGATTTTATTTTGCAGTAGACGAAATGGCGAATGTATCATCTTCTTTTGATATGGTTTGCTTTGAAGAAGGTTTATTTGTATGAACTGTTTAAATATAGGTATCATTATATTCAGGTATAGTATTTACagttaaaaaatagtttttggtCACGTTGCTTCCTCTTCTCCCAGTGTGAGTTGGTGGCGTATCCGTTTACAAACCAATAGCGGGAACCTTTAGTGGCTTAACTCTGGCAAAGTCCTCCATGAAGTggtattatttcatttttttgtaaatgaaaatgtacCGGAAGAGACTGAAGAAGGAAGCTTTAAACGGAAGATCCCTCAAGTGTTTGTAGTGAGGGGAAATCCACCTAACGACTCAATGTAAGACCCCGCTTATCCTGATGACTGCACACAAAACTCTCAATTATCCTTCAATAAATGGGCATGTGCATGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793268.1 True 3995 mRNA 0.42 8 18328508 18340419

Neighbor

gene id symbol gene type direction distance location
LOC120554369 LOC104960229 coding downstream 58839 18262836 ~ 18269669 (-)
LOC120554053 mpp4 coding downstream 141931 18177570 ~ 18186577 (-)
LOC120554723 NA coding downstream 151800 18159816 ~ 18176708 (-)
LOC120554721 LOC104966233,LOC100698939 coding downstream 170208 18143977 ~ 18158300 (-)
abi2b abi2 coding downstream 185055 18113995 ~ 18143453 (-)
LOC120554329 LOC100698054,LOC102783597 coding upstream 2294 18342713 ~ 18353343 (-)
LOC120554003 LOC103370269 coding upstream 16685 18357104 ~ 18402213 (-)
acvr2ab acvr2a,LOC102784913,LOC103371821 coding upstream 125529 18465948 ~ 18523016 (-)
kynu kynu,LOC102785701 coding upstream 1211017 19551436 ~ 19581258 (-)
bzw1a LOC107384676,LOC108245120,LOC107082828,LOC103371116,LOC101480137,LOC103457358 coding upstream 1268203 19608622 ~ 19621651 (-)
G235844 NA non-coding downstream 27555 18252824 ~ 18300953 (-)
LOC120554613 NA non-coding downstream 71002 18256943 ~ 18257506 (-)
G235816 NA non-coding downstream 114340 18210503 ~ 18214168 (-)
G235793 NA non-coding downstream 214551 18062294 ~ 18113957 (-)
G235743 NA non-coding downstream 342330 17985922 ~ 17986178 (-)
G235908 NA non-coding upstream 193028 18533447 ~ 18534684 (-)
G235929 NA non-coding upstream 256580 18596999 ~ 18597208 (-)
G235930 NA non-coding upstream 408011 18748430 ~ 18748645 (-)
G235931 NA non-coding upstream 446950 18787369 ~ 18787622 (-)
G235933 NA non-coding upstream 553488 18893907 ~ 18894507 (-)
LOC120554370 LOC103370263 other downstream 1405 18271078 ~ 18327103 (-)
s100b LOC103360204,LOC104927403 other downstream 583251 17734731 ~ 17745257 (-)
G235350 NA other downstream 1224991 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 1572443 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 1586220 16736186 ~ 16742288 (-)
LOC120554371 mbd5,LOC102784158 other upstream 63807 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 1183085 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 1390900 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 2026922 20367341 ~ 20368433 (-)
G236340 NA other upstream 2385984 20726403 ~ 20728427 (-)

Expression


Co-expression Network