n6amt1 (n6amt1,LOC102791235)


Basic Information

Item Value
gene id n6amt1
gene name n6amt1,LOC102791235
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 3602897 ~ 3604527 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793318.1
TAGGTTGTATACAAGGAAGTGGACTGTGAGTGCTATGTGGCTAACACATTCTGGCTAGCTACATAGCTTTTCATTTACAGCTTTTTATGCAGCGTGTTAGCGGCGCTTGCGGTAAAGCCGACGTTAAAAACAGCAACACCGTTTTCTAACGTTACAAACAACACAGAACTTAACATATCACAACAAAGGGTGAGCCAGGAGCACGTGCGGGTGGATAGCGAGTCTGGTAATTGAAGAGAACATGTCTGCAAGTTACCCCACACCAGTTTACTCCCACGCAGGAAGAGGAGACTTCCGAGATGTCTACGAGCCGGCGGAGGACTCTTTCCTCTTGGTTGACGCCCTGGAGAAAGACGCAGACAGGCTGCAGCTGATGAGcccgtgtgtgtgtctggaggtTGGCAGCGGCTCGGGAGTGGTGTCAGCTTTTCTAGCATCAGTGATTGGACCTTCAGCTCTATATCTCTGCACCGATGTGAATCCTGCAGCAGCACAGTGCACAGCAAAGACAGCTTCCTGTAACAATGTTTCACTGCAGCCCGTCAACACGTCACTGGCGGAGTGTCTCCTTCCCCGCTTAAGTGGAAAAGTGGACGTCCTTCTCTTCAACCCTCCCTACGTGGTCACACCTTCAGAAGAGGTGGGCAGCACGGGTATAGAGGCTGCCTGGGCCGGGGGGAAGCGAGGCCGAGAGGTGACCGACAGGTTTCTGCCTGTGGTAGCACAGTTGCTCTCCAGCAAAGGGTTATTCTACCTCATTACTATAGCGGAGAACGATCCAGAGGAGATTATCCGTCTACTGGACAAATGTGGCTTGAGGGGAGAGTCATGCTTGTCGACCAGAGCTGGAAATGAGAGGCTGTCCGTCCTGCGCTTCCATAGAAGCTAACAAACATGGAACGGTCACTTAGAAATCTGCTGAAAGGATTACAGGAACCGATGAGAAGAAATGTTTTCAGGATATCATTTTCGACTGACTGGACACTGTTGTCTGCAAGGACAAATTTACTGCAGAGGAAAAGAATCCTCAGAACTGGTGTGAAGAACTTTCTAAATGAAGCTCTGCAGAACAAAAACTTTTCTTTGCAAGAAATTGGTGAAatgaccaaggtgcttctgaTGTACTGATAACATTGTaagtaaataaaacaaatgccaCACCA

Function

symbol description
n6amt1 Predicted to enable S-adenosylmethionine-dependent methyltransferase activity and protein methyltransferase activity. Predicted to act upstream of or within methylation. Predicted to be part of eRF1 methyltransferase complex. Orthologous to human N6AMT1 (N-6 adenine-specific DNA methyltransferase 1).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006479 protein methylation biological_process
GO:0003676 nucleic acid binding molecular_function
GO:0008276 protein methyltransferase activity molecular_function

KEGG:

id description
K19589 N6AMT1; release factor glutamine methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793318.1 True 1163 mRNA 0.49 6 3602897 3604527

Neighbor

gene id symbol gene type direction distance location
LOC120554784 LOC106527415,LOC107377197,LOC103370263 coding upstream 21494 3578746 ~ 3581403 (+)
LOC120554783 LOC106527415,LOC107377197,LOC103370263 coding upstream 50881 3548229 ~ 3552016 (+)
LOC120554431 osbpl11 coding upstream 63856 3520732 ~ 3539041 (+)
zswim2 NA coding upstream 707042 2890550 ~ 2895855 (+)
col5a2b col5a2 coding upstream 730784 2844611 ~ 2872113 (+)
LOC120554447 LOC102195007 coding downstream 513391 4117918 ~ 4120596 (+)
LOC120554451 LOC103372195,LOC102795276 coding downstream 575309 4179836 ~ 4198507 (+)
nop58 nop58,LOC102781044 coding downstream 630962 4235489 ~ 4241283 (+)
LOC120554799 NA coding downstream 634000 4238527 ~ 4238610 (+)
LOC120554801 NA coding downstream 634346 4238873 ~ 4238955 (+)
LOC120554436 NA non-coding upstream 7196 3561507 ~ 3595701 (+)
G232254 NA non-coding upstream 43938 3558403 ~ 3558959 (+)
LOC120554433 NA non-coding upstream 63856 3505847 ~ 3539041 (+)
G232211 NA non-coding upstream 240103 3332334 ~ 3362794 (+)
LOC120554428 NA non-coding upstream 247883 3315070 ~ 3355014 (+)
LOC120554443 NA non-coding downstream 43732 3648259 ~ 3650261 (+)
G232298 NA non-coding downstream 48909 3653436 ~ 3744410 (+)
G232319 NA non-coding downstream 505596 4110123 ~ 4111860 (+)
LOC120554455 NA non-coding downstream 594310 4198837 ~ 4232080 (+)
trnam-cau_63 NA non-coding downstream 596035 4200562 ~ 4200634 (+)
LOC120554435 NA other upstream 12018 3553578 ~ 3590879 (+)
G232031 NA other upstream 696411 2899813 ~ 2906486 (+)
sumo1 sumo1 other upstream 1108723 2489135 ~ 2494174 (+)
G231514 LOC101480717,LOC102290810,LOC102794459 other upstream 1504148 2096875 ~ 2098749 (+)
G231461 LOC107384560,LOC103366582 other upstream 1811039 1716411 ~ 1791858 (+)
dock9b LOC103359855 other downstream 735967 4340494 ~ 4399319 (+)
G232425 NA other downstream 812637 4417164 ~ 4418102 (+)
scn1lab NA other downstream 1127935 4732462 ~ 4772995 (+)
LOC120554485 LOC103354594,LOC108245699,LOC106531295,LOC107086615 other downstream 1244111 4848638 ~ 4949089 (+)
LOC120554464 LOC103354592,LOC107380990,LOC103389749,LOC106930317,LOC103147190,LOC106960073,LOC105020031,LOC106574546,LOC108438056,LOC106575308 other downstream 1398794 5003321 ~ 5041882 (+)

Expression


Co-expression Network